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ATCC64974_18940-T1, ATCC64974_18940-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_18940-T1
Unique NameATCC64974_18940-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000003.1:2324173..2325368-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_18940-T1 ID=ATCC64974_18940-T1|Name=ATCC64974_18940-T1|organism=Aspergillus niger N402|type=mRNA|length=1196bp|location=Sequence derived from alignment at OGUI01000003.1:2324173..2325368- (Aspergillus niger N402)
ATGCTTTTGCTAGACTATCACAACGTTCTCATCCACTCCCTCCTGACGGA
GCGGTTCTCTGGGTACAGCTTCCCCCCCGCCTCCGGTATACGCCAGGCTA
CCAGCTAACAGCTCCATTCATGCTTCCTTCAGAACCCCGCCCGTATCAAT
CGATCAGATCGTTTCCGACTTTGACGGAGTGACCTTTCATCTGTCTACGC
CAGAATCCAAAACCAAGATCCTCATCTCCATCAACGTGAAATGCTTCCGG
GAGCTTGTCCAGTACGGCGCCCAGGAGGTGCTGGAAAGGGAATACGGCCC
CTACATTGTCACCCCAGAGCCCGGCTATGACTTCTCCGTCCTGATCGATC
TAGAGAACCTGCCCGCCGAGCAAGAGGCGAAGGATGAACTCATCATGCGC
CTGGCGCTGATGAAGCGCAACGCCATGGCCGCCCCCTTCGAGAGAGCATT
CGATGAATTCGCCAAGTTAGCCGAAGAGGCTTCGAGATACACAAGCGAGA
CTGCGCCCCAGGGAGTTAAGGAGGGAGGAGAGGTTATGGCCATTCACTAT
CGAGAGGAGGAAGCGATTTATATCAAGGCCAGCCATGATCGTGTCACGGT
GATCTTCAGCACAGTGTTCCGGGAGGAGACAGATCGCATCTTTGGCAAGG
TGTTCCTGCAGGAATTCGTCGATGCCAGACGCCGTGTCCTCACCCTGCAA
AATGCTCCCCAGGTACTCTTCCGAAACGACTGTCCTCTGGAGCTGGCCGG
TGTGCCTGGCCTTCAGAACGGTAATGACGGTAGAATCAGCTACGTCACTT
TCGGTATGTATTCGTTGTTATGCATCACCCACCGTTCGCAGTCACTAACC
GCTTCTAGTCTTGTTCCCTCGTCACCTAACCCCCCAGAGACGCTATGAGA
ACATCTCCCACATCCAGATATTCCGTGATTACTTCCATTACCACATCAAA
GCATCCAAGGTAGCTTTATATGTCATAATGCAGGCCAGTTCAATATGCTT
ACTAAGTCTCCAGGCATACATCCACACTAGGATGCGCAAGAGGACCGCAG
ACTTCCTTCAAGGTAAGAAGCGACCCCTAACAATTGTGGTATGTCCAGTT
CACTAATGAATGATAGTTCTCAACCGGGCGCGGCCCGAGAACGAGGAGCG
AGAAAGGAAGACGGCCAGTGGCCGTACTTTCAGGGTTCAGGGATAG
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Coding sequence (CDS) from alignment at OGUI01000003.1:2324173..2325368-

>ATCC64974_18940-T1 ID=ATCC64974_18940-T1|Name=ATCC64974_18940-T1|organism=Aspergillus niger N402|type=CDS|length=4815bp|location=Sequence derived from alignment at OGUI01000003.1:2324173..2325368- (Aspergillus niger N402)
TTCTCAACCGGGCGCGGCCCGAGAACGAGGAGCGAGAAAGGAAGACGGCC
AGTGGCCGTACTTTCAGGGTTCAGGGATAGGCATACATCCACACTAGGAT
GCGCAAGAGGACCGCAGACTTCCTTCAAGTCTTGTTCCCTCGTCACCTAA
CCCCCCAGAGACGCTATGAGAACATCTCCCACATCCAGATATTCCGTGAT
TACTTCCATTACCACATCAAAGCATCCAAGAACCCCGCCCGTATCAATCG
ATCAGATCGTTTCCGACTTTGACGGAGTGACCTTTCATCTGTCTACGCCA
GAATCCAAAACCAAGATCCTCATCTCCATCAACGTGAAATGCTTCCGGGA
GCTTGTCCAGTACGGCGCCCAGGAGGTGCTGGAAAGGGAATACGGCCCCT
ACATTGTCACCCCAGAGCCCGGCTATGACTTCTCCGTCCTGATCGATCTA
GAGAACCTGCCCGCCGAGCAAGAGGCGAAGGATGAACTCATCATGCGCCT
GGCGCTGATGAAGCGCAACGCCATGGCCGCCCCCTTCGAGAGAGCATTCG
ATGAATTCGCCAAGTTAGCCGAAGAGGCTTCGAGATACACAAGCGAGACT
GCGCCCCAGGGAGTTAAGGAGGGAGGAGAGGTTATGGCCATTCACTATCG
AGAGGAGGAAGCGATTTATATCAAGGCCAGCCATGATCGTGTCACGGTGA
TCTTCAGCACAGTGTTCCGGGAGGAGACAGATCGCATCTTTGGCAAGGTG
TTCCTGCAGGAATTCGTCGATGCCAGACGCCGTGTCCTCACCCTGCAAAA
TGCTCCCCAGGTACTCTTCCGAAACGACTGTCCTCTGGAGCTGGCCGGTG
TGCCTGGCCTTCAGAACGGTAATGACGGTAGAATCAGCTACGTCACTTTC
GATGCTTTTGCTAGACTATCACAACGTTCTCATCCACTCCCTCCTGACGG
AGCGGTTCTCTGGTTCTCAACCGGGCGCGGCCCGAGAACGAGGAGCGAGA
AAGGAAGACGGCCAGTGGCCGTACTTTCAGGGTTCAGGGATAGGCATACA
TCCACACTAGGATGCGCAAGAGGACCGCAGACTTCCTTCAAGTCTTGTTC
CCTCGTCACCTAACCCCCCAGAGACGCTATGAGAACATCTCCCACATCCA
GATATTCCGTGATTACTTCCATTACCACATCAAAGCATCCAAGAACCCCG
CCCGTATCAATCGATCAGATCGTTTCCGACTTTGACGGAGTGACCTTTCA
TCTGTCTACGCCAGAATCCAAAACCAAGATCCTCATCTCCATCAACGTGA
AATGCTTCCGGGAGCTTGTCCAGTACGGCGCCCAGGAGGTGCTGGAAAGG
GAATACGGCCCCTACATTGTCACCCCAGAGCCCGGCTATGACTTCTCCGT
CCTGATCGATCTAGAGAACCTGCCCGCCGAGCAAGAGGCGAAGGATGAAC
TCATCATGCGCCTGGCGCTGATGAAGCGCAACGCCATGGCCGCCCCCTTC
GAGAGAGCATTCGATGAATTCGCCAAGTTAGCCGAAGAGGCTTCGAGATA
CACAAGCGAGACTGCGCCCCAGGGAGTTAAGGAGGGAGGAGAGGTTATGG
CCATTCACTATCGAGAGGAGGAAGCGATTTATATCAAGGCCAGCCATGAT
CGTGTCACGGTGATCTTCAGCACAGTGTTCCGGGAGGAGACAGATCGCAT
CTTTGGCAAGGTGTTCCTGCAGGAATTCGTCGATGCCAGACGCCGTGTCC
TCACCCTGCAAAATGCTCCCCAGGTACTCTTCCGAAACGACTGTCCTCTG
GAGCTGGCCGGTGTGCCTGGCCTTCAGAACGGTAATGACGGTAGAATCAG
CTACGTCACTTTCGATGCTTTTGCTAGACTATCACAACGTTCTCATCCAC
TCCCTCCTGACGGAGCGGTTCTCTGGTTCTCAACCGGGCGCGGCCCGAGA
ACGAGGAGCGAGAAAGGAAGACGGCCAGTGGCCGTACTTTCAGGGTTCAG
GGATAGGCATACATCCACACTAGGATGCGCAAGAGGACCGCAGACTTCCT
TCAAGTCTTGTTCCCTCGTCACCTAACCCCCCAGAGACGCTATGAGAACA
TCTCCCACATCCAGATATTCCGTGATTACTTCCATTACCACATCAAAGCA
TCCAAGAACCCCGCCCGTATCAATCGATCAGATCGTTTCCGACTTTGACG
GAGTGACCTTTCATCTGTCTACGCCAGAATCCAAAACCAAGATCCTCATC
TCCATCAACGTGAAATGCTTCCGGGAGCTTGTCCAGTACGGCGCCCAGGA
GGTGCTGGAAAGGGAATACGGCCCCTACATTGTCACCCCAGAGCCCGGCT
ATGACTTCTCCGTCCTGATCGATCTAGAGAACCTGCCCGCCGAGCAAGAG
GCGAAGGATGAACTCATCATGCGCCTGGCGCTGATGAAGCGCAACGCCAT
GGCCGCCCCCTTCGAGAGAGCATTCGATGAATTCGCCAAGTTAGCCGAAG
AGGCTTCGAGATACACAAGCGAGACTGCGCCCCAGGGAGTTAAGGAGGGA
GGAGAGGTTATGGCCATTCACTATCGAGAGGAGGAAGCGATTTATATCAA
GGCCAGCCATGATCGTGTCACGGTGATCTTCAGCACAGTGTTCCGGGAGG
AGACAGATCGCATCTTTGGCAAGGTGTTCCTGCAGGAATTCGTCGATGCC
AGACGCCGTGTCCTCACCCTGCAAAATGCTCCCCAGGTACTCTTCCGAAA
CGACTGTCCTCTGGAGCTGGCCGGTGTGCCTGGCCTTCAGAACGGTAATG
ACGGTAGAATCAGCTACGTCACTTTCGATGCTTTTGCTAGACTATCACAA
CGTTCTCATCCACTCCCTCCTGACGGAGCGGTTCTCTGGTTCTCAACCGG
GCGCGGCCCGAGAACGAGGAGCGAGAAAGGAAGACGGCCAGTGGCCGTAC
TTTCAGGGTTCAGGGATAGGCATACATCCACACTAGGATGCGCAAGAGGA
CCGCAGACTTCCTTCAAGTCTTGTTCCCTCGTCACCTAACCCCCCAGAGA
CGCTATGAGAACATCTCCCACATCCAGATATTCCGTGATTACTTCCATTA
CCACATCAAAGCATCCAAGAACCCCGCCCGTATCAATCGATCAGATCGTT
TCCGACTTTGACGGAGTGACCTTTCATCTGTCTACGCCAGAATCCAAAAC
CAAGATCCTCATCTCCATCAACGTGAAATGCTTCCGGGAGCTTGTCCAGT
ACGGCGCCCAGGAGGTGCTGGAAAGGGAATACGGCCCCTACATTGTCACC
CCAGAGCCCGGCTATGACTTCTCCGTCCTGATCGATCTAGAGAACCTGCC
CGCCGAGCAAGAGGCGAAGGATGAACTCATCATGCGCCTGGCGCTGATGA
AGCGCAACGCCATGGCCGCCCCCTTCGAGAGAGCATTCGATGAATTCGCC
AAGTTAGCCGAAGAGGCTTCGAGATACACAAGCGAGACTGCGCCCCAGGG
AGTTAAGGAGGGAGGAGAGGTTATGGCCATTCACTATCGAGAGGAGGAAG
CGATTTATATCAAGGCCAGCCATGATCGTGTCACGGTGATCTTCAGCACA
GTGTTCCGGGAGGAGACAGATCGCATCTTTGGCAAGGTGTTCCTGCAGGA
ATTCGTCGATGCCAGACGCCGTGTCCTCACCCTGCAAAATGCTCCCCAGG
TACTCTTCCGAAACGACTGTCCTCTGGAGCTGGCCGGTGTGCCTGGCCTT
CAGAACGGTAATGACGGTAGAATCAGCTACGTCACTTTCGATGCTTTTGC
TAGACTATCACAACGTTCTCATCCACTCCCTCCTGACGGAGCGGTTCTCT
GGTTCTCAACCGGGCGCGGCCCGAGAACGAGGAGCGAGAAAGGAAGACGG
CCAGTGGCCGTACTTTCAGGGTTCAGGGATAGGCATACATCCACACTAGG
ATGCGCAAGAGGACCGCAGACTTCCTTCAAGTCTTGTTCCCTCGTCACCT
AACCCCCCAGAGACGCTATGAGAACATCTCCCACATCCAGATATTCCGTG
ATTACTTCCATTACCACATCAAAGCATCCAAGAACCCCGCCCGTATCAAT
CGATCAGATCGTTTCCGACTTTGACGGAGTGACCTTTCATCTGTCTACGC
CAGAATCCAAAACCAAGATCCTCATCTCCATCAACGTGAAATGCTTCCGG
GAGCTTGTCCAGTACGGCGCCCAGGAGGTGCTGGAAAGGGAATACGGCCC
CTACATTGTCACCCCAGAGCCCGGCTATGACTTCTCCGTCCTGATCGATC
TAGAGAACCTGCCCGCCGAGCAAGAGGCGAAGGATGAACTCATCATGCGC
CTGGCGCTGATGAAGCGCAACGCCATGGCCGCCCCCTTCGAGAGAGCATT
CGATGAATTCGCCAAGTTAGCCGAAGAGGCTTCGAGATACACAAGCGAGA
CTGCGCCCCAGGGAGTTAAGGAGGGAGGAGAGGTTATGGCCATTCACTAT
CGAGAGGAGGAAGCGATTTATATCAAGGCCAGCCATGATCGTGTCACGGT
GATCTTCAGCACAGTGTTCCGGGAGGAGACAGATCGCATCTTTGGCAAGG
TGTTCCTGCAGGAATTCGTCGATGCCAGACGCCGTGTCCTCACCCTGCAA
AATGCTCCCCAGGTACTCTTCCGAAACGACTGTCCTCTGGAGCTGGCCGG
TGTGCCTGGCCTTCAGAACGGTAATGACGGTAGAATCAGCTACGTCACTT
TCGATGCTTTTGCTAGACTATCACAACGTTCTCATCCACTCCCTCCTGAC
GGAGCGGTTCTCTGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005885Arp2/3 protein complex
GO:0015629actin cytoskeleton
Vocabulary: Biological Process
TermDefinition
GO:0034314Arp2/3 complex-mediated actin nucleation
GO:0030041actin filament polymerization
GO:0030833regulation of actin filament polymerization
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ARC2ATCC64974_18940Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_18940-T1ATCC64974_18940-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_18940-T1.cdsATCC64974_18940-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_18940-T1.exon5ATCC64974_18940-T1.exon5Aspergillus niger N402exon
ATCC64974_18940-T1.exon4ATCC64974_18940-T1.exon4Aspergillus niger N402exon
ATCC64974_18940-T1.exon3ATCC64974_18940-T1.exon3Aspergillus niger N402exon
ATCC64974_18940-T1.exon2ATCC64974_18940-T1.exon2Aspergillus niger N402exon
ATCC64974_18940-T1.exon1ATCC64974_18940-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteBUSCO:EOG09263EQZ
DBxrefInterPro:IPR007188
DBxrefInterPro:IPR034666
DBxrefPFAM:PF04045
ProductARP2/3 actin-organizing complex subunit Arc34
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000003.1supercontigOGUI01000003.1:2324173..2325368 -
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