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ATCC64974_19050-T1, ATCC64974_19050-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_19050-T1
Unique NameATCC64974_19050-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000003.1:2356814..2357581+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_19050-T1 ID=ATCC64974_19050-T1|Name=ATCC64974_19050-T1|organism=Aspergillus niger N402|type=mRNA|length=768bp|location=Sequence derived from alignment at OGUI01000003.1:2356814..2357581+ (Aspergillus niger N402)
ATGACGGCGGACGTGAGCCATGCAGCATCACGCGTGCTCACCTCCAACAG
CCCCCGCGACCCGAGCTATGATGAGTTCTCCTTCGTACCCTTCCTCCGCC
AGAGCTATGGCTTCGGCCTTGCCAGTGATGTGCCCGTCTGCAAAGCCTAC
AGCGAAGGCCACTGCCCTCTAGGACCAGCCTGTCCCGATCGCCACCCAAC
CCCATCGCGTGTCACCACGTCGACCACCACCGCGTCGGGACTAGCACCAT
CAACCACACATGGATCTCTGGTCTGTAAACATTTCCTCAAGGGACTCTGC
AAGAAGGGTCTCAAGTGCGAGTATCTTCATGAATACAACCTCCGTCGCAT
GCCCGAATGCCAGTCCTTCTCGCGGTCCGGCTATTGTCCCAATGGCGATG
ACTGCCTGTATCAGCACGTGCGGGAGCAGGCGCGTCTGCCCCCTTGTGAA
CACTACGACCGGGGATTCTGCGAGCTGGGACCCCTGTGTGCCAAGCGGCA
TGTTCGTCGGCGCTTGTGTCAATACTACTTGGCTGGGTTCTGTCCGGACG
GCAAGGCCTGCGTGGATGCTCACCCCCGGTGGTCGGAGAACCTTCCCCGT
CCGCAGATCCGGGTCGAGAAGACCGAAGAAGAGCTGGAACGGGAACGGGC
GTTAATTCGGGAGGAACAGGAGAAGGAGAAGGAGCGTGAGAGGGAGTGGA
GGAGTGAGCGTGGTCGTGGTGGGGGGTTCATGCGGGGTCGGTACCGGGGG
CGTGGACGTGGACAGTAG
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Coding sequence (CDS) from alignment at OGUI01000003.1:2356814..2357581+

>ATCC64974_19050-T1 ID=ATCC64974_19050-T1|Name=ATCC64974_19050-T1|organism=Aspergillus niger N402|type=CDS|length=768bp|location=Sequence derived from alignment at OGUI01000003.1:2356814..2357581+ (Aspergillus niger N402)
ATGACGGCGGACGTGAGCCATGCAGCATCACGCGTGCTCACCTCCAACAG
CCCCCGCGACCCGAGCTATGATGAGTTCTCCTTCGTACCCTTCCTCCGCC
AGAGCTATGGCTTCGGCCTTGCCAGTGATGTGCCCGTCTGCAAAGCCTAC
AGCGAAGGCCACTGCCCTCTAGGACCAGCCTGTCCCGATCGCCACCCAAC
CCCATCGCGTGTCACCACGTCGACCACCACCGCGTCGGGACTAGCACCAT
CAACCACACATGGATCTCTGGTCTGTAAACATTTCCTCAAGGGACTCTGC
AAGAAGGGTCTCAAGTGCGAGTATCTTCATGAATACAACCTCCGTCGCAT
GCCCGAATGCCAGTCCTTCTCGCGGTCCGGCTATTGTCCCAATGGCGATG
ACTGCCTGTATCAGCACGTGCGGGAGCAGGCGCGTCTGCCCCCTTGTGAA
CACTACGACCGGGGATTCTGCGAGCTGGGACCCCTGTGTGCCAAGCGGCA
TGTTCGTCGGCGCTTGTGTCAATACTACTTGGCTGGGTTCTGTCCGGACG
GCAAGGCCTGCGTGGATGCTCACCCCCGGTGGTCGGAGAACCTTCCCCGT
CCGCAGATCCGGGTCGAGAAGACCGAAGAAGAGCTGGAACGGGAACGGGC
GTTAATTCGGGAGGAACAGGAGAAGGAGAAGGAGCGTGAGAGGGAGTGGA
GGAGTGAGCGTGGTCGTGGTGGGGGGTTCATGCGGGGTCGGTACCGGGGG
CGTGGACGTGGACAGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
YTH1ATCC64974_19050Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_19050-T1.exon1ATCC64974_19050-T1.exon1Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_19050-T1.cdsATCC64974_19050-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_19050-T1ATCC64974_19050-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteBUSCO:EOG092654KW
DBxrefInterPro:IPR036855
DBxrefInterPro:IPR000571
DBxrefPFAM:PF00642
ProductRNA-binding component of cleavage and polyadenylation factor
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000003.1supercontigOGUI01000003.1:2356814..2357581 +
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