|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000003.1:2371028..2371721+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_19110-T1 ID=ATCC64974_19110-T1|Name=ATCC64974_19110-T1|organism=Aspergillus niger N402|type=mRNA|length=694bp|location=Sequence derived from alignment at OGUI01000003.1:2371028..2371721+ (Aspergillus niger N402)
ATGACAGACGTCAAAGACACCCGCAAACCAGACCAAGTCTTCACATCAGC
GGATCGTATCCGGCAATTGAACGAAATAGACAAGGTAAGTTCACAGAAAA
GAAATAGAGGCCGGGATTAATTCCCCGCGCGACACCACCGAAATGCTGCC
TAGCTAGCGATGGATACTCAACTTCCACGCTACTACATTATTTATGCTGT
GTCATTGACTTCATTCCACCCTCACTAATCTCCGCAAATTACTACAGGAT
GTGGCCAAGCTAATTCACTCCGCGGGTCTTGCAATTCAAGCCCTGACCAA
CGCTCGGTCGGGCGAGTCACCTTCGGACAACTCCCTCGCATCCCACCAAG
CCCGCTTCAAGGAGGCCACTTCGCAATACTTCGCCCTCCTTTCGTCCATT
GACGTTCGACTCCGTCGTCAGGTGTATGCTCTGGAGGAGGCGTCTATTCT
TGCGCCGGAGACAGCGTCGAGAGCGGAAAATCTACCCGGGGCGAGCAGTG
GCGGGGTGGCGGGCGCATCGTCGAACCCGCTCGATGTTAGTTGGCTCAAC
AGTCGGAAGGACACGGTGGGCAAGGATAAGGAAGCGGAGTTGTGGGCTGC
TGCGAGGGAGTTCGTGGAGCGGATTAGCAATCCGGCGTCTGTGAGCTCGG
GAGCGAAGACAGAGAGCGAGCAGGAGAAGATGGAGGTTGATTAG back to topCoding sequence (CDS) from alignment at OGUI01000003.1:2371028..2371721+ >ATCC64974_19110-T1 ID=ATCC64974_19110-T1|Name=ATCC64974_19110-T1|organism=Aspergillus niger N402|type=CDS|length=1062bp|location=Sequence derived from alignment at OGUI01000003.1:2371028..2371721+ (Aspergillus niger N402)
ATGACAGACGTCAAAGACACCCGCAAACCAGACCAAGTCTTCACATCAGC
GGATCGTATCCGGCAATTGAACGAAATAGACAAGGATGTGGCCAAGCTAA
TTCACTCCGCGGGTCTTGCAATTCAAGCCCTGACCAACGCTCGGTCGGGC
GAGTCACCTTCGGACAACTCCCTCGCATCCCACCAAGCCCGCTTCAAGGA
GGCCACTTCGCAATACTTCGCCCTCCTTTCGTCCATTGACGTTCGACTCC
GTCGTCAGGTGTATGCTCTGGAGGAGGCGTCTATTCTTGCGCCGGAGACA
GCGTCGAGAGCGGAAAATCTACCCGGGGCGAGCAGTGGCGGGGTGGCGGG
CGCATCGTCGAACCCGCTCGATGTTAGTTGGCTCAACAGTCGGAAGGACA
CGGTGGGCAAGGATAAGGAAGCGGAGTTGTGGGCTGCTGCGAGGGAGTTC
GTGGAGCGGATTAGCAATCCGGCGTCTGTGAGCTCGGGAGCGAAGACAGA
GAGCGAGCAGGAGAAGATGGAGGTTGATTAGATGACAGACGTCAAAGACA
CCCGCAAACCAGACCAAGTCTTCACATCAGCGGATCGTATCCGGCAATTG
AACGAAATAGACAAGGATGTGGCCAAGCTAATTCACTCCGCGGGTCTTGC
AATTCAAGCCCTGACCAACGCTCGGTCGGGCGAGTCACCTTCGGACAACT
CCCTCGCATCCCACCAAGCCCGCTTCAAGGAGGCCACTTCGCAATACTTC
GCCCTCCTTTCGTCCATTGACGTTCGACTCCGTCGTCAGGTGTATGCTCT
GGAGGAGGCGTCTATTCTTGCGCCGGAGACAGCGTCGAGAGCGGAAAATC
TACCCGGGGCGAGCAGTGGCGGGGTGGCGGGCGCATCGTCGAACCCGCTC
GATGTTAGTTGGCTCAACAGTCGGAAGGACACGGTGGGCAAGGATAAGGA
AGCGGAGTTGTGGGCTGCTGCGAGGGAGTTCGTGGAGCGGATTAGCAATC
CGGCGTCTGTGAGCTCGGGAGCGAAGACAGAGAGCGAGCAGGAGAAGATG
GAGGTTGATTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016592 | mediator complex |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003712 | transcription coregulator activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006357 | regulation of transcription by RNA polymerase II |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_19110-T1 | ATCC64974_19110-T1-protein | Aspergillus niger N402 | polypeptide |
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR019404 |
| DBxref | PFAM:PF10280 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000003.1 | supercontig | OGUI01000003.1:2371028..2371721 + |
|
