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ATCC64974_19480-T1, ATCC64974_19480-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_19480-T1
Unique NameATCC64974_19480-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000003.1:2516739..2517653-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_19480-T1 ID=ATCC64974_19480-T1|Name=ATCC64974_19480-T1|organism=Aspergillus niger N402|type=mRNA|length=915bp|location=Sequence derived from alignment at OGUI01000003.1:2516739..2517653- (Aspergillus niger N402)
ATGCGATGGCCGCCATGGGCTTCCAACACGCAAGCCTCCAACAATGACCA
CCCTACCACCACGAACAACAATGACCCCAAGAACCTACTCGACTGGAGCG
CCTTCACCGAACTCCGCACCCTCATCCCAACTCTAGTCCTCACAACCGGC
ATCCTCAGCGCCTTCACCCTGCACCGGAACTACCTCCGCCGGTTCCCCAC
AGCAGTCAACATCACGCCCGCATATTACCGTCGCCGCAGCATCCTGGGAA
AAGTAACCAGCGTCGGTGACGGCGACAACTTTCGCATCTATCATACACCC
GGCGGAAGACTCGCGGGTTGGGGCTGGGTACCCTGGAAGAAGGTTCCCAC
GACGCGGAAGGAATTGAGAGATCAGACTGTATGTATACCTCCCCACTTTT
TTTTTTTTCATCTACGTTTATGCTACCGGAGACTATATTTCTAACATCAG
AATGAAATTAAATAGATCCATGTCCGGATAGCTGGTGTCGACGCCCCCGA
ACAAGCGCACTTCGGACGCCCCGCGCAACCCTTCGGCAAAGAAGCACACG
AGTGGCTAACGGGGTACTTGATAAACCGGCGCGTGCGGATATATGTGCAT
CGACAGGACCAGTATCAGCGTGTGGTGGCGACGGTGTTTGTGCGGCGGGC
GCTGGATTTCCCGGTTCCGTTTCGCAGGCGCGATGTCGGGTATGAGATGT
TGAGGAAGGGGTTGGCAACAGTGTATGAGGCGAAGGTTGGGGCGGAGTTT
GGGGGTGAGGTGATGGAGAAGAAGTATCGGAGTGCGGAGTGGTGGGCGAA
GGCGAGGGGGTTGGGGCTGTGGAAGGGGTTCAAGAAGAATAGGGATGCGT
GGGAGAGTCCGAGGGAGTTTAAGACTAGGACGGGGATGGAAGATGTGGGG
GATGGGAAGAAGTAG
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Coding sequence (CDS) from alignment at OGUI01000003.1:2516739..2517653-

>ATCC64974_19480-T1 ID=ATCC64974_19480-T1|Name=ATCC64974_19480-T1|organism=Aspergillus niger N402|type=CDS|length=1656bp|location=Sequence derived from alignment at OGUI01000003.1:2516739..2517653- (Aspergillus niger N402)
ATCCATGTCCGGATAGCTGGTGTCGACGCCCCCGAACAAGCGCACTTCGG
ACGCCCCGCGCAACCCTTCGGCAAAGAAGCACACGAGTGGCTAACGGGGT
ACTTGATAAACCGGCGCGTGCGGATATATGTGCATCGACAGGACCAGTAT
CAGCGTGTGGTGGCGACGGTGTTTGTGCGGCGGGCGCTGGATTTCCCGGT
TCCGTTTCGCAGGCGCGATGTCGGGTATGAGATGTTGAGGAAGGGGTTGG
CAACAGTGTATGAGGCGAAGGTTGGGGCGGAGTTTGGGGGTGAGGTGATG
GAGAAGAAGTATCGGAGTGCGGAGTGGTGGGCGAAGGCGAGGGGGTTGGG
GCTGTGGAAGGGGTTCAAGAAGAATAGGGATGCGTGGGAGAGTCCGAGGG
AGTTTAAGACTAGGACGGGGATGGAAGATGTGGGGGATGGGAAGAAGTAG
ATGCGATGGCCGCCATGGGCTTCCAACACGCAAGCCTCCAACAATGACCA
CCCTACCACCACGAACAACAATGACCCCAAGAACCTACTCGACTGGAGCG
CCTTCACCGAACTCCGCACCCTCATCCCAACTCTAGTCCTCACAACCGGC
ATCCTCAGCGCCTTCACCCTGCACCGGAACTACCTCCGCCGGTTCCCCAC
AGCAGTCAACATCACGCCCGCATATTACCGTCGCCGCAGCATCCTGGGAA
AAGTAACCAGCGTCGGTGACGGCGACAACTTTCGCATCTATCATACACCC
GGCGGAAGACTCGCGGGTTGGGGCTGGGTACCCTGGAAGAAGGTTCCCAC
GACGCGGAAGGAATTGAGAGATCAGACTATCCATGTCCGGATAGCTGGTG
TCGACGCCCCCGAACAAGCGCACTTCGGACGCCCCGCGCAACCCTTCGGC
AAAGAAGCACACGAGTGGCTAACGGGGTACTTGATAAACCGGCGCGTGCG
GATATATGTGCATCGACAGGACCAGTATCAGCGTGTGGTGGCGACGGTGT
TTGTGCGGCGGGCGCTGGATTTCCCGGTTCCGTTTCGCAGGCGCGATGTC
GGGTATGAGATGTTGAGGAAGGGGTTGGCAACAGTGTATGAGGCGAAGGT
TGGGGCGGAGTTTGGGGGTGAGGTGATGGAGAAGAAGTATCGGAGTGCGG
AGTGGTGGGCGAAGGCGAGGGGGTTGGGGCTGTGGAAGGGGTTCAAGAAG
AATAGGGATGCGTGGGAGAGTCCGAGGGAGTTTAAGACTAGGACGGGGAT
GGAAGATGTGGGGGATGGGAAGAAGTAGATGCGATGGCCGCCATGGGCTT
CCAACACGCAAGCCTCCAACAATGACCACCCTACCACCACGAACAACAAT
GACCCCAAGAACCTACTCGACTGGAGCGCCTTCACCGAACTCCGCACCCT
CATCCCAACTCTAGTCCTCACAACCGGCATCCTCAGCGCCTTCACCCTGC
ACCGGAACTACCTCCGCCGGTTCCCCACAGCAGTCAACATCACGCCCGCA
TATTACCGTCGCCGCAGCATCCTGGGAAAAGTAACCAGCGTCGGTGACGG
CGACAACTTTCGCATCTATCATACACCCGGCGGAAGACTCGCGGGTTGGG
GCTGGGTACCCTGGAAGAAGGTTCCCACGACGCGGAAGGAATTGAGAGAT
CAGACT
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
LCL3ATCC64974_19480Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_19480-T1ATCC64974_19480-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_19480-T1.cdsATCC64974_19480-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_19480-T1.exon2ATCC64974_19480-T1.exon2Aspergillus niger N402exon
ATCC64974_19480-T1.exon1ATCC64974_19480-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteEggNog:ENOG41
NoteBUSCO:EOG092644K0
DBxrefInterPro:IPR035437
DBxrefInterPro:IPR016071
DBxrefPFAM:PF00565
Productputative endonuclease lcl3
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000003.1supercontigOGUI01000003.1:2516739..2517653 -
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