You are here

Home

ATCC64974_19610-T1, ATCC64974_19610-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_19610-T1
Unique NameATCC64974_19610-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000003.1:2553917..2555376-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_19610-T1 ID=ATCC64974_19610-T1|Name=ATCC64974_19610-T1|organism=Aspergillus niger N402|type=mRNA|length=1460bp|location=Sequence derived from alignment at OGUI01000003.1:2553917..2555376- (Aspergillus niger N402)
ATGCGACGCACCGCGACTCTCCTTTCGGCCTTAGGCCTCACGGCGCAGCT
CAGCTCTGCAGCCTACACTTTACAAGACGACTACTCCGGCTCTGGCTTCT
TCGACGGCTTCTCCTTCTTCACCGACACCGACCCCACCAACGGCTTCGTT
GACTACGTTGATGAAGCCACCGCCCAGAGCAATGGCTATATCTCCACCTC
CGGCGACTCCGTCTACATGGGTGTCGACCACACCAACGTCGCCGGCAGTA
GCGGACGTCAAAGTGTTCGCATCTCCAGCGACGCCACCTACAACCATGGT
CTCTTCATCCTAGACCTCGAACACATGCCCGGAGGTATCTGTGGCACCTG
GCCTGCCTTGTAAGCCCCCCTCTCCATTCCCTCCACCCTTCACTCATAAC
ATCTCTATTGGACACAAAAGCTAAAACAAATTCATTGTAGCTGGCTCGTC
GGCGCCGACTGGCCCAACAACGGCGAAATCGACATCATCGAAGGCGTCAA
CCAACAATCCGGCAACGACATGACCCTGCACACTAGCGACGGCTGCAGCA
TCTCCTCCTCATCGGACTTCACCGGCTCCATGACCACCGACAACTGCTAC
GTCTACGCCGCAGGCCAATCTAGTAACGCCGGGTGTGGTATCACTGATCC
CGACGCTACCTCGTACGGAACCGCCTTCAACGCGAATGGCGGCGGCGTGT
TCGCGACCGAGTGGACTTCAGATGCGATTAGTATCTGGTTCTTCGAACGG
GGGAGCATCCCTGATGATATTGATTCCGGGAATCCGGATCCGGATTCTTG
GGGTTCCCCTGTTGCGAGGTTTCAAGGTGATTGTGATATTGATAGTCATT
TTGATGGGTTGCAGATTGTATGTTCTCCCACCCCCTTTCCCCCCTTCTTT
TTTGCTCTTTGCATGTTGTTGGTTTGCGATGATGGGCGGGGGGCGCTAAT
ATGCTGGTATAGATCTTCGATACTACCTTCTGCGGCGACTGGGCCGGTAA
TGTCTGGGGCTCGGGCAGTTGTGCGTCCGTCGCTAGCTCGTGCAGTAGTT
ATGTGGCGAATAATCCGGGGGCTTTTGTCGACGCTTACTGGAGTATTAAT
TCGTTGAAGGTTTATCAGGATGATGGTGATAGCACTGTTGCTGGGGTGGT
TGATTATGGGGATGATGACGACGAGGATGAAGATGATGATCAGGATGATG
GGGACGATGATTCCGACGACGATGACGATGACGACGACGACTCTGATTCG
GATGATGATTCAGATGATGATGGGGACGACGACGACGACGACGACGACGA
TGATGATGACGATGAAGATTCTCGTCCCTGGAGGGGAGGAAGAAACCATC
ATGGTCAGATGCTGAACGCGTCGACGTCGACTTCGTCGTTCCCTAGCCCG
TCGTTTGTGAAGAAGGCCAGGTGGGAGCCGAGGAATTATATGGCGGGCAT
GATTTTCTAA
back to top

Coding sequence (CDS) from alignment at OGUI01000003.1:2553917..2555376-

>ATCC64974_19610-T1 ID=ATCC64974_19610-T1|Name=ATCC64974_19610-T1|organism=Aspergillus niger N402|type=CDS|length=3852bp|location=Sequence derived from alignment at OGUI01000003.1:2553917..2555376- (Aspergillus niger N402)
ATCTTCGATACTACCTTCTGCGGCGACTGGGCCGGTAATGTCTGGGGCTC
GGGCAGTTGTGCGTCCGTCGCTAGCTCGTGCAGTAGTTATGTGGCGAATA
ATCCGGGGGCTTTTGTCGACGCTTACTGGAGTATTAATTCGTTGAAGGTT
TATCAGGATGATGGTGATAGCACTGTTGCTGGGGTGGTTGATTATGGGGA
TGATGACGACGAGGATGAAGATGATGATCAGGATGATGGGGACGATGATT
CCGACGACGATGACGATGACGACGACGACTCTGATTCGGATGATGATTCA
GATGATGATGGGGACGACGACGACGACGACGACGACGATGATGATGACGA
TGAAGATTCTCGTCCCTGGAGGGGAGGAAGAAACCATCATGGTCAGATGC
TGAACGCGTCGACGTCGACTTCGTCGTTCCCTAGCCCGTCGTTTGTGAAG
AAGGCCAGGTGGGAGCCGAGGAATTATATGGCGGGCATGATTTTCTAACT
GGCTCGTCGGCGCCGACTGGCCCAACAACGGCGAAATCGACATCATCGAA
GGCGTCAACCAACAATCCGGCAACGACATGACCCTGCACACTAGCGACGG
CTGCAGCATCTCCTCCTCATCGGACTTCACCGGCTCCATGACCACCGACA
ACTGCTACGTCTACGCCGCAGGCCAATCTAGTAACGCCGGGTGTGGTATC
ACTGATCCCGACGCTACCTCGTACGGAACCGCCTTCAACGCGAATGGCGG
CGGCGTGTTCGCGACCGAGTGGACTTCAGATGCGATTAGTATCTGGTTCT
TCGAACGGGGGAGCATCCCTGATGATATTGATTCCGGGAATCCGGATCCG
GATTCTTGGGGTTCCCCTGTTGCGAGGTTTCAAGGTGATTGTGATATTGA
TAGTCATTTTGATGGGTTGCAGATTATGCGACGCACCGCGACTCTCCTTT
CGGCCTTAGGCCTCACGGCGCAGCTCAGCTCTGCAGCCTACACTTTACAA
GACGACTACTCCGGCTCTGGCTTCTTCGACGGCTTCTCCTTCTTCACCGA
CACCGACCCCACCAACGGCTTCGTTGACTACGTTGATGAAGCCACCGCCC
AGAGCAATGGCTATATCTCCACCTCCGGCGACTCCGTCTACATGGGTGTC
GACCACACCAACGTCGCCGGCAGTAGCGGACGTCAAAGTGTTCGCATCTC
CAGCGACGCCACCTACAACCATGGTCTCTTCATCCTAGACCTCGAACACA
TGCCCGGAGGTATCTGTGGCACCTGGCCTGCCTTATCTTCGATACTACCT
TCTGCGGCGACTGGGCCGGTAATGTCTGGGGCTCGGGCAGTTGTGCGTCC
GTCGCTAGCTCGTGCAGTAGTTATGTGGCGAATAATCCGGGGGCTTTTGT
CGACGCTTACTGGAGTATTAATTCGTTGAAGGTTTATCAGGATGATGGTG
ATAGCACTGTTGCTGGGGTGGTTGATTATGGGGATGATGACGACGAGGAT
GAAGATGATGATCAGGATGATGGGGACGATGATTCCGACGACGATGACGA
TGACGACGACGACTCTGATTCGGATGATGATTCAGATGATGATGGGGACG
ACGACGACGACGACGACGACGATGATGATGACGATGAAGATTCTCGTCCC
TGGAGGGGAGGAAGAAACCATCATGGTCAGATGCTGAACGCGTCGACGTC
GACTTCGTCGTTCCCTAGCCCGTCGTTTGTGAAGAAGGCCAGGTGGGAGC
CGAGGAATTATATGGCGGGCATGATTTTCTAACTGGCTCGTCGGCGCCGA
CTGGCCCAACAACGGCGAAATCGACATCATCGAAGGCGTCAACCAACAAT
CCGGCAACGACATGACCCTGCACACTAGCGACGGCTGCAGCATCTCCTCC
TCATCGGACTTCACCGGCTCCATGACCACCGACAACTGCTACGTCTACGC
CGCAGGCCAATCTAGTAACGCCGGGTGTGGTATCACTGATCCCGACGCTA
CCTCGTACGGAACCGCCTTCAACGCGAATGGCGGCGGCGTGTTCGCGACC
GAGTGGACTTCAGATGCGATTAGTATCTGGTTCTTCGAACGGGGGAGCAT
CCCTGATGATATTGATTCCGGGAATCCGGATCCGGATTCTTGGGGTTCCC
CTGTTGCGAGGTTTCAAGGTGATTGTGATATTGATAGTCATTTTGATGGG
TTGCAGATTATGCGACGCACCGCGACTCTCCTTTCGGCCTTAGGCCTCAC
GGCGCAGCTCAGCTCTGCAGCCTACACTTTACAAGACGACTACTCCGGCT
CTGGCTTCTTCGACGGCTTCTCCTTCTTCACCGACACCGACCCCACCAAC
GGCTTCGTTGACTACGTTGATGAAGCCACCGCCCAGAGCAATGGCTATAT
CTCCACCTCCGGCGACTCCGTCTACATGGGTGTCGACCACACCAACGTCG
CCGGCAGTAGCGGACGTCAAAGTGTTCGCATCTCCAGCGACGCCACCTAC
AACCATGGTCTCTTCATCCTAGACCTCGAACACATGCCCGGAGGTATCTG
TGGCACCTGGCCTGCCTTATCTTCGATACTACCTTCTGCGGCGACTGGGC
CGGTAATGTCTGGGGCTCGGGCAGTTGTGCGTCCGTCGCTAGCTCGTGCA
GTAGTTATGTGGCGAATAATCCGGGGGCTTTTGTCGACGCTTACTGGAGT
ATTAATTCGTTGAAGGTTTATCAGGATGATGGTGATAGCACTGTTGCTGG
GGTGGTTGATTATGGGGATGATGACGACGAGGATGAAGATGATGATCAGG
ATGATGGGGACGATGATTCCGACGACGATGACGATGACGACGACGACTCT
GATTCGGATGATGATTCAGATGATGATGGGGACGACGACGACGACGACGA
CGACGATGATGATGACGATGAAGATTCTCGTCCCTGGAGGGGAGGAAGAA
ACCATCATGGTCAGATGCTGAACGCGTCGACGTCGACTTCGTCGTTCCCT
AGCCCGTCGTTTGTGAAGAAGGCCAGGTGGGAGCCGAGGAATTATATGGC
GGGCATGATTTTCTAACTGGCTCGTCGGCGCCGACTGGCCCAACAACGGC
GAAATCGACATCATCGAAGGCGTCAACCAACAATCCGGCAACGACATGAC
CCTGCACACTAGCGACGGCTGCAGCATCTCCTCCTCATCGGACTTCACCG
GCTCCATGACCACCGACAACTGCTACGTCTACGCCGCAGGCCAATCTAGT
AACGCCGGGTGTGGTATCACTGATCCCGACGCTACCTCGTACGGAACCGC
CTTCAACGCGAATGGCGGCGGCGTGTTCGCGACCGAGTGGACTTCAGATG
CGATTAGTATCTGGTTCTTCGAACGGGGGAGCATCCCTGATGATATTGAT
TCCGGGAATCCGGATCCGGATTCTTGGGGTTCCCCTGTTGCGAGGTTTCA
AGGTGATTGTGATATTGATAGTCATTTTGATGGGTTGCAGATTATGCGAC
GCACCGCGACTCTCCTTTCGGCCTTAGGCCTCACGGCGCAGCTCAGCTCT
GCAGCCTACACTTTACAAGACGACTACTCCGGCTCTGGCTTCTTCGACGG
CTTCTCCTTCTTCACCGACACCGACCCCACCAACGGCTTCGTTGACTACG
TTGATGAAGCCACCGCCCAGAGCAATGGCTATATCTCCACCTCCGGCGAC
TCCGTCTACATGGGTGTCGACCACACCAACGTCGCCGGCAGTAGCGGACG
TCAAAGTGTTCGCATCTCCAGCGACGCCACCTACAACCATGGTCTCTTCA
TCCTAGACCTCGAACACATGCCCGGAGGTATCTGTGGCACCTGGCCTGCC
TT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_19610ATCC64974_19610Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_19610-T1ATCC64974_19610-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_19610-T1.cdsATCC64974_19610-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_19610-T1.exon3ATCC64974_19610-T1.exon3Aspergillus niger N402exon
ATCC64974_19610-T1.exon2ATCC64974_19610-T1.exon2Aspergillus niger N402exon
ATCC64974_19610-T1.exon1ATCC64974_19610-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteEggNog:ENOG41
NoteSECRETED:SignalP(1-20)
NoteCAZy:GH16
DBxrefInterPro:IPR013320
DBxrefInterPro:IPR000757
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000003.1supercontigOGUI01000003.1:2553917..2555376 -
Powered by Drupal