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ATCC64974_19880-T1, ATCC64974_19880-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_19880-T1
Unique NameATCC64974_19880-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000003.1:2652470..2654421-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_19880-T1 ID=ATCC64974_19880-T1|Name=ATCC64974_19880-T1|organism=Aspergillus niger N402|type=mRNA|length=1952bp|location=Sequence derived from alignment at OGUI01000003.1:2652470..2654421- (Aspergillus niger N402)
ATGGCCAGCCATATCATCGGCAACCGCAACAGCACGCCTGAAGCCTCCAA
GTCCAGTCTTCGTCCTCCATCGTCGTCTCGGAATCTAGGATCGCACCAGC
TTCGTGCATCGGCCGATATGTCGGGCTTCCCATCTCCTCTGTCATCCCGC
AGCATCCGTCCTTCCTCGGAAGTCTACTTCAATCAGCAGTCGCAGGCGTC
GAACAACGCGGAGGATCCGTTGGACCGTGCGGCTCAGCAGTGGCTCGCGG
ATATTGATCAGTACGAGACTACATTGGAAGAAATGGCCGCTGCCACGCTG
GACCAGGATTTCAAGGATGAGCTTAGCGCCATCGAGCAGTGGTTCCGGGT
TCTCAGCGAGGCGGAGAGGACTGCTGCCCTTTACGCTCTGTTGCAGCAGA
CCACTCAGGTGCAGATTCGTTTCTTCATTCAGGTCTTGCAGCAGATGGCC
AAGAGCCATCCCATGTCGGGACTGTTGTCTCCGGCCAACTTTGGCGAGAA
GGGTAAGTTGCATTTCAAACCAGGCAAGCGTGACAGGTATTAACAATAAT
ATTTTGCCAGATGCCATGTCTAACCGCTTGAACGATGCCATGTCCAAGTT
GAACGTGGACAGCTCCCGGAGCTCCCTCGGTCGCCCCCCGCCGTCCCCCG
GTGCTAAGCGCAACTCCGGACTCGACTCGTCCACCATTAATGCCATGTTC
CCTGATGCTGCTGCGGCAATTGCAAAGAAGAAGGCCGAGTTCACCCAGCA
AACGGGCAATGCTCCTCCCTCGAACCGGAACAGCGCTGTTTTCGATCGGA
CTTCCTTTGTGGCACCCACCATTTCGGCCCCAGACAACAGCAACGACACC
TTGGGCCAGCCTCCGGTTTCACCCTGGGCCCAGCGCGGATCTGAGCCGCA
ACCCCCTATCGCCCGTCCCAAGTCTTCGTCCGGTCATCAGCCCATGGGCC
AATTCAGCCAGACTCCTTCGAGCCTGCGCTCTCCGCTCCCTACCCAAACC
GCCACGATTCCTGCCCCCGAGATTGATGCTCCTTTGCTCTCGCCGTACAA
TGTTGGAAATGCCAGCTGGGCCTCCATGACCAACACCCCCATGACGGCGA
CCTTTGGCCAGCAGCCGCAGCAGCCCCAGCAGAATTCGCAGGCCGATATG
GTGGCCAACGCGACTGCGATGAAGCTGGCCGCACTGTCGACCGTCAACAA
CCGCATTGCACTTGATGATGCTCGCAAGTACCGTCGGGCTCGCTCCAACG
ATGGCCAGGGTAAGAACTCGGCCAACAGCCACGCCATGTCTCAGGGTGGC
CTGGCCAGCCCGGGCCTCCCGGGCCACAGTCACCTTGTTGCCGGACAGCT
GTTGAACACTCAGCAGCTGGCGGCTTTGCAGGCACAGCAACAGGCTGCGA
TGGCGGGTCGTCGCTCCCGCCCGACGTCGCCTGGAATCGCCATGCAGGGT
GCTGGCGGACTTGGTCCGATGGGCTTCACTTCGCCGCAGAACAACGGCTT
CTTGGCAGCATATGACCCGAACAACCCGCTCATGGGTAACGGCCTGGGTG
CACTTGGTATCGGGCAGTTTGGCCTGGGAGGTCCTGAGGGCTACCTCTCA
GACCACTCGGAAGTGGCTCGCGGCCGGTCCCCGCGTGGTCGTCGCGGTAG
CTCGAAGCCGCCGGAGGACCCCACGGACCCTAACCTCTTGAAGGACATTC
CCAGCTGGCTGAGATCGCTGCGGCTGCACAAGTACACGGAAAACCTGAAG
GACTTGAAATGGACGGAGCTGGTCGAATTGAACGACAAGGCGCTGGAAGA
CCGCGGCGTCAATGCTCTTGGTGCCAGAAACAAAATGCTCAAGGTGAGTT
ACATAAACTCTCCAAGGTGTTTAGACATCATGCTAATCTTTGTAGGTTTT
TGAACAAGTCAGAGAAGCCAAAGCCGAGGGCAAGCTCGACAACATTGCGT
GA
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Coding sequence (CDS) from alignment at OGUI01000003.1:2652470..2654421-

>ATCC64974_19880-T1 ID=ATCC64974_19880-T1|Name=ATCC64974_19880-T1|organism=Aspergillus niger N402|type=CDS|length=5526bp|location=Sequence derived from alignment at OGUI01000003.1:2652470..2654421- (Aspergillus niger N402)
GTTTTTGAACAAGTCAGAGAAGCCAAAGCCGAGGGCAAGCTCGACAACAT
TGCGTGAATGCCATGTCTAACCGCTTGAACGATGCCATGTCCAAGTTGAA
CGTGGACAGCTCCCGGAGCTCCCTCGGTCGCCCCCCGCCGTCCCCCGGTG
CTAAGCGCAACTCCGGACTCGACTCGTCCACCATTAATGCCATGTTCCCT
GATGCTGCTGCGGCAATTGCAAAGAAGAAGGCCGAGTTCACCCAGCAAAC
GGGCAATGCTCCTCCCTCGAACCGGAACAGCGCTGTTTTCGATCGGACTT
CCTTTGTGGCACCCACCATTTCGGCCCCAGACAACAGCAACGACACCTTG
GGCCAGCCTCCGGTTTCACCCTGGGCCCAGCGCGGATCTGAGCCGCAACC
CCCTATCGCCCGTCCCAAGTCTTCGTCCGGTCATCAGCCCATGGGCCAAT
TCAGCCAGACTCCTTCGAGCCTGCGCTCTCCGCTCCCTACCCAAACCGCC
ACGATTCCTGCCCCCGAGATTGATGCTCCTTTGCTCTCGCCGTACAATGT
TGGAAATGCCAGCTGGGCCTCCATGACCAACACCCCCATGACGGCGACCT
TTGGCCAGCAGCCGCAGCAGCCCCAGCAGAATTCGCAGGCCGATATGGTG
GCCAACGCGACTGCGATGAAGCTGGCCGCACTGTCGACCGTCAACAACCG
CATTGCACTTGATGATGCTCGCAAGTACCGTCGGGCTCGCTCCAACGATG
GCCAGGGTAAGAACTCGGCCAACAGCCACGCCATGTCTCAGGGTGGCCTG
GCCAGCCCGGGCCTCCCGGGCCACAGTCACCTTGTTGCCGGACAGCTGTT
GAACACTCAGCAGCTGGCGGCTTTGCAGGCACAGCAACAGGCTGCGATGG
CGGGTCGTCGCTCCCGCCCGACGTCGCCTGGAATCGCCATGCAGGGTGCT
GGCGGACTTGGTCCGATGGGCTTCACTTCGCCGCAGAACAACGGCTTCTT
GGCAGCATATGACCCGAACAACCCGCTCATGGGTAACGGCCTGGGTGCAC
TTGGTATCGGGCAGTTTGGCCTGGGAGGTCCTGAGGGCTACCTCTCAGAC
CACTCGGAAGTGGCTCGCGGCCGGTCCCCGCGTGGTCGTCGCGGTAGCTC
GAAGCCGCCGGAGGACCCCACGGACCCTAACCTCTTGAAGGACATTCCCA
GCTGGCTGAGATCGCTGCGGCTGCACAAGTACACGGAAAACCTGAAGGAC
TTGAAATGGACGGAGCTGGTCGAATTGAACGACAAGGCGCTGGAAGACCG
CGGCGTCAATGCTCTTGGTGCCAGAAACAAAATGCTCAAGATGGCCAGCC
ATATCATCGGCAACCGCAACAGCACGCCTGAAGCCTCCAAGTCCAGTCTT
CGTCCTCCATCGTCGTCTCGGAATCTAGGATCGCACCAGCTTCGTGCATC
GGCCGATATGTCGGGCTTCCCATCTCCTCTGTCATCCCGCAGCATCCGTC
CTTCCTCGGAAGTCTACTTCAATCAGCAGTCGCAGGCGTCGAACAACGCG
GAGGATCCGTTGGACCGTGCGGCTCAGCAGTGGCTCGCGGATATTGATCA
GTACGAGACTACATTGGAAGAAATGGCCGCTGCCACGCTGGACCAGGATT
TCAAGGATGAGCTTAGCGCCATCGAGCAGTGGTTCCGGGTTCTCAGCGAG
GCGGAGAGGACTGCTGCCCTTTACGCTCTGTTGCAGCAGACCACTCAGGT
GCAGATTCGTTTCTTCATTCAGGTCTTGCAGCAGATGGCCAAGAGCCATC
CCATGTCGGGACTGTTGTCTCCGGCCAACTTTGGCGAGAAGGGTTTTTGA
ACAAGTCAGAGAAGCCAAAGCCGAGGGCAAGCTCGACAACATTGCGTGAA
TGCCATGTCTAACCGCTTGAACGATGCCATGTCCAAGTTGAACGTGGACA
GCTCCCGGAGCTCCCTCGGTCGCCCCCCGCCGTCCCCCGGTGCTAAGCGC
AACTCCGGACTCGACTCGTCCACCATTAATGCCATGTTCCCTGATGCTGC
TGCGGCAATTGCAAAGAAGAAGGCCGAGTTCACCCAGCAAACGGGCAATG
CTCCTCCCTCGAACCGGAACAGCGCTGTTTTCGATCGGACTTCCTTTGTG
GCACCCACCATTTCGGCCCCAGACAACAGCAACGACACCTTGGGCCAGCC
TCCGGTTTCACCCTGGGCCCAGCGCGGATCTGAGCCGCAACCCCCTATCG
CCCGTCCCAAGTCTTCGTCCGGTCATCAGCCCATGGGCCAATTCAGCCAG
ACTCCTTCGAGCCTGCGCTCTCCGCTCCCTACCCAAACCGCCACGATTCC
TGCCCCCGAGATTGATGCTCCTTTGCTCTCGCCGTACAATGTTGGAAATG
CCAGCTGGGCCTCCATGACCAACACCCCCATGACGGCGACCTTTGGCCAG
CAGCCGCAGCAGCCCCAGCAGAATTCGCAGGCCGATATGGTGGCCAACGC
GACTGCGATGAAGCTGGCCGCACTGTCGACCGTCAACAACCGCATTGCAC
TTGATGATGCTCGCAAGTACCGTCGGGCTCGCTCCAACGATGGCCAGGGT
AAGAACTCGGCCAACAGCCACGCCATGTCTCAGGGTGGCCTGGCCAGCCC
GGGCCTCCCGGGCCACAGTCACCTTGTTGCCGGACAGCTGTTGAACACTC
AGCAGCTGGCGGCTTTGCAGGCACAGCAACAGGCTGCGATGGCGGGTCGT
CGCTCCCGCCCGACGTCGCCTGGAATCGCCATGCAGGGTGCTGGCGGACT
TGGTCCGATGGGCTTCACTTCGCCGCAGAACAACGGCTTCTTGGCAGCAT
ATGACCCGAACAACCCGCTCATGGGTAACGGCCTGGGTGCACTTGGTATC
GGGCAGTTTGGCCTGGGAGGTCCTGAGGGCTACCTCTCAGACCACTCGGA
AGTGGCTCGCGGCCGGTCCCCGCGTGGTCGTCGCGGTAGCTCGAAGCCGC
CGGAGGACCCCACGGACCCTAACCTCTTGAAGGACATTCCCAGCTGGCTG
AGATCGCTGCGGCTGCACAAGTACACGGAAAACCTGAAGGACTTGAAATG
GACGGAGCTGGTCGAATTGAACGACAAGGCGCTGGAAGACCGCGGCGTCA
ATGCTCTTGGTGCCAGAAACAAAATGCTCAAGATGGCCAGCCATATCATC
GGCAACCGCAACAGCACGCCTGAAGCCTCCAAGTCCAGTCTTCGTCCTCC
ATCGTCGTCTCGGAATCTAGGATCGCACCAGCTTCGTGCATCGGCCGATA
TGTCGGGCTTCCCATCTCCTCTGTCATCCCGCAGCATCCGTCCTTCCTCG
GAAGTCTACTTCAATCAGCAGTCGCAGGCGTCGAACAACGCGGAGGATCC
GTTGGACCGTGCGGCTCAGCAGTGGCTCGCGGATATTGATCAGTACGAGA
CTACATTGGAAGAAATGGCCGCTGCCACGCTGGACCAGGATTTCAAGGAT
GAGCTTAGCGCCATCGAGCAGTGGTTCCGGGTTCTCAGCGAGGCGGAGAG
GACTGCTGCCCTTTACGCTCTGTTGCAGCAGACCACTCAGGTGCAGATTC
GTTTCTTCATTCAGGTCTTGCAGCAGATGGCCAAGAGCCATCCCATGTCG
GGACTGTTGTCTCCGGCCAACTTTGGCGAGAAGGGTTTTTGAACAAGTCA
GAGAAGCCAAAGCCGAGGGCAAGCTCGACAACATTGCGTGAATGCCATGT
CTAACCGCTTGAACGATGCCATGTCCAAGTTGAACGTGGACAGCTCCCGG
AGCTCCCTCGGTCGCCCCCCGCCGTCCCCCGGTGCTAAGCGCAACTCCGG
ACTCGACTCGTCCACCATTAATGCCATGTTCCCTGATGCTGCTGCGGCAA
TTGCAAAGAAGAAGGCCGAGTTCACCCAGCAAACGGGCAATGCTCCTCCC
TCGAACCGGAACAGCGCTGTTTTCGATCGGACTTCCTTTGTGGCACCCAC
CATTTCGGCCCCAGACAACAGCAACGACACCTTGGGCCAGCCTCCGGTTT
CACCCTGGGCCCAGCGCGGATCTGAGCCGCAACCCCCTATCGCCCGTCCC
AAGTCTTCGTCCGGTCATCAGCCCATGGGCCAATTCAGCCAGACTCCTTC
GAGCCTGCGCTCTCCGCTCCCTACCCAAACCGCCACGATTCCTGCCCCCG
AGATTGATGCTCCTTTGCTCTCGCCGTACAATGTTGGAAATGCCAGCTGG
GCCTCCATGACCAACACCCCCATGACGGCGACCTTTGGCCAGCAGCCGCA
GCAGCCCCAGCAGAATTCGCAGGCCGATATGGTGGCCAACGCGACTGCGA
TGAAGCTGGCCGCACTGTCGACCGTCAACAACCGCATTGCACTTGATGAT
GCTCGCAAGTACCGTCGGGCTCGCTCCAACGATGGCCAGGGTAAGAACTC
GGCCAACAGCCACGCCATGTCTCAGGGTGGCCTGGCCAGCCCGGGCCTCC
CGGGCCACAGTCACCTTGTTGCCGGACAGCTGTTGAACACTCAGCAGCTG
GCGGCTTTGCAGGCACAGCAACAGGCTGCGATGGCGGGTCGTCGCTCCCG
CCCGACGTCGCCTGGAATCGCCATGCAGGGTGCTGGCGGACTTGGTCCGA
TGGGCTTCACTTCGCCGCAGAACAACGGCTTCTTGGCAGCATATGACCCG
AACAACCCGCTCATGGGTAACGGCCTGGGTGCACTTGGTATCGGGCAGTT
TGGCCTGGGAGGTCCTGAGGGCTACCTCTCAGACCACTCGGAAGTGGCTC
GCGGCCGGTCCCCGCGTGGTCGTCGCGGTAGCTCGAAGCCGCCGGAGGAC
CCCACGGACCCTAACCTCTTGAAGGACATTCCCAGCTGGCTGAGATCGCT
GCGGCTGCACAAGTACACGGAAAACCTGAAGGACTTGAAATGGACGGAGC
TGGTCGAATTGAACGACAAGGCGCTGGAAGACCGCGGCGTCAATGCTCTT
GGTGCCAGAAACAAAATGCTCAAGATGGCCAGCCATATCATCGGCAACCG
CAACAGCACGCCTGAAGCCTCCAAGTCCAGTCTTCGTCCTCCATCGTCGT
CTCGGAATCTAGGATCGCACCAGCTTCGTGCATCGGCCGATATGTCGGGC
TTCCCATCTCCTCTGTCATCCCGCAGCATCCGTCCTTCCTCGGAAGTCTA
CTTCAATCAGCAGTCGCAGGCGTCGAACAACGCGGAGGATCCGTTGGACC
GTGCGGCTCAGCAGTGGCTCGCGGATATTGATCAGTACGAGACTACATTG
GAAGAAATGGCCGCTGCCACGCTGGACCAGGATTTCAAGGATGAGCTTAG
CGCCATCGAGCAGTGGTTCCGGGTTCTCAGCGAGGCGGAGAGGACTGCTG
CCCTTTACGCTCTGTTGCAGCAGACCACTCAGGTGCAGATTCGTTTCTTC
ATTCAGGTCTTGCAGCAGATGGCCAAGAGCCATCCCATGTCGGGACTGTT
GTCTCCGGCCAACTTTGGCGAGAAGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0043488regulation of mRNA stability
Vocabulary: Molecular Function
TermDefinition
GO:0003729mRNA binding
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
VTS1ATCC64974_19880Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_19880-T1ATCC64974_19880-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_19880-T1.cdsATCC64974_19880-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_19880-T1.exon3ATCC64974_19880-T1.exon3Aspergillus niger N402exon
ATCC64974_19880-T1.exon2ATCC64974_19880-T1.exon2Aspergillus niger N402exon
ATCC64974_19880-T1.exon1ATCC64974_19880-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR037635
DBxrefInterPro:IPR013761
DBxrefInterPro:IPR001660
DBxrefPFAM:PF07647
ProductFlap-structured DNA-binding and RNA-binding protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000003.1supercontigOGUI01000003.1:2652470..2654421 -
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