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ATCC64974_19930-T1, ATCC64974_19930-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_19930-T1
Unique NameATCC64974_19930-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000003.1:2680569..2681700-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_19930-T1 ID=ATCC64974_19930-T1|Name=ATCC64974_19930-T1|organism=Aspergillus niger N402|type=mRNA|length=1132bp|location=Sequence derived from alignment at OGUI01000003.1:2680569..2681700- (Aspergillus niger N402)
ATGTGGCTCATTAACTGGTGTAGGTAGTCTCCTGTTTTGCCATCCGCCGA
CTTGGCCCCGATCAGGTGGTCTGCAGACCTGCCCTGCACGCTCTTGGATC
CATTGGATCCTCATCGTTTCTCTTCTGTTCACAGTGTCTCTCGTATGCCA
ATTTACTGATTTATCTTTTCCGAATAGTCTACGATCTCCTGGCCTCCCTT
GGCCTGCTCAACAAGCACGCCAAGCTCCTGTTCCTCGGTCTCGATAATGC
CGGAAAGACGACCCTCCTGCACATGCTGAAGGTATGTGAGCTTCCTTTAG
TCGCAGACAAGCTCTGCTTTGATGGCAACAATGGTGGATATGGTATCGCC
TGGGATCGACTCCGATCGCAAGGGAATGCCACCACGGCAGGGATAGAGCC
GCGAGAGATGTGGACGATAAGCTAACATCTGTGTTTGATAATAGAACGAC
CGGGTTGCCATCCTCCAGCCCACTGCTCACCCGAGTACGTATCACCCGCA
CGAACATGCCAGCGAGGGACTATTCGACAGCGACCGAGGAGAATCGATTT
TCATGAACATGGGCTAACCGCACTCCTTGAATACAGCATCCGAAGAACTC
GCCATCGGCAACAACCGCTTCACGACCTTCGACCTGGGTGGTCACCAGCA
GGGTGAGTAACACACCTCGTAGCCCCGTGGTATAGATCGAAACAAGAAAA
CTAAATGTAGCAATTCTTGTTAAATAGCTCGTCGTCTGTGGAAGGACTAC
TTCCCCGAAGTTAGCGGTATCGTCTTCCTCGTTGACGCCAAGGACCACGA
GCGTTTCCCCGAGTCCAAGGCCGAGCTCGACGCTCTCCTTGCCATGGAGG
AGCTGGCTAAGGTTCCTTTCCTGATCCTCGGAAACAAGATCGACCACCCG
GATGCTGTTAGCGAGGATGAGCTGCGCCACCAGCTTGGATTGTACCAGAC
CACGGGTAAGGGCAAGGTTCCTCTCGAGGGAATCCGGCCCATTGAGGTGT
TCATGTGCAGTGTTGTCATGAGACAGGGTGAGTGGGATTTTTCATATCCA
AACCAATGTCGACCAGGAGCTAATCGTTCTGTGCCTTGTAGGATACGGTG
AAGGTATCAGATGGCTGTCTCAATACGTCTAA
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Coding sequence (CDS) from alignment at OGUI01000003.1:2680569..2681700-

>ATCC64974_19930-T1 ID=ATCC64974_19930-T1|Name=ATCC64974_19930-T1|organism=Aspergillus niger N402|type=CDS|length=3420bp|location=Sequence derived from alignment at OGUI01000003.1:2680569..2681700- (Aspergillus niger N402)
GATACGGTGAAGGTATCAGATGGCTGTCTCAATACGTCTAACTCGTCGTC
TGTGGAAGGACTACTTCCCCGAAGTTAGCGGTATCGTCTTCCTCGTTGAC
GCCAAGGACCACGAGCGTTTCCCCGAGTCCAAGGCCGAGCTCGACGCTCT
CCTTGCCATGGAGGAGCTGGCTAAGGTTCCTTTCCTGATCCTCGGAAACA
AGATCGACCACCCGGATGCTGTTAGCGAGGATGAGCTGCGCCACCAGCTT
GGATTGTACCAGACCACGGGTAAGGGCAAGGTTCCTCTCGAGGGAATCCG
GCCCATTGAGGTGTTCATGTGCAGTGTTGTCATGAGACAGGCATCCGAAG
AACTCGCCATCGGCAACAACCGCTTCACGACCTTCGACCTGGGTGGTCAC
CAGCAGGAACGACCGGGTTGCCATCCTCCAGCCCACTGCTCACCCGATCT
ACGATCTCCTGGCCTCCCTTGGCCTGCTCAACAAGCACGCCAAGCTCCTG
TTCCTCGGTCTCGATAATGCCGGAAAGACGACCCTCCTGCACATGCTGAA
GATGTGGCTCATTAACTGGTGATACGGTGAAGGTATCAGATGGCTGTCTC
AATACGTCTAACTCGTCGTCTGTGGAAGGACTACTTCCCCGAAGTTAGCG
GTATCGTCTTCCTCGTTGACGCCAAGGACCACGAGCGTTTCCCCGAGTCC
AAGGCCGAGCTCGACGCTCTCCTTGCCATGGAGGAGCTGGCTAAGGTTCC
TTTCCTGATCCTCGGAAACAAGATCGACCACCCGGATGCTGTTAGCGAGG
ATGAGCTGCGCCACCAGCTTGGATTGTACCAGACCACGGGTAAGGGCAAG
GTTCCTCTCGAGGGAATCCGGCCCATTGAGGTGTTCATGTGCAGTGTTGT
CATGAGACAGGCATCCGAAGAACTCGCCATCGGCAACAACCGCTTCACGA
CCTTCGACCTGGGTGGTCACCAGCAGGAACGACCGGGTTGCCATCCTCCA
GCCCACTGCTCACCCGATCTACGATCTCCTGGCCTCCCTTGGCCTGCTCA
ACAAGCACGCCAAGCTCCTGTTCCTCGGTCTCGATAATGCCGGAAAGACG
ACCCTCCTGCACATGCTGAAGATGTGGCTCATTAACTGGTGATACGGTGA
AGGTATCAGATGGCTGTCTCAATACGTCTAACTCGTCGTCTGTGGAAGGA
CTACTTCCCCGAAGTTAGCGGTATCGTCTTCCTCGTTGACGCCAAGGACC
ACGAGCGTTTCCCCGAGTCCAAGGCCGAGCTCGACGCTCTCCTTGCCATG
GAGGAGCTGGCTAAGGTTCCTTTCCTGATCCTCGGAAACAAGATCGACCA
CCCGGATGCTGTTAGCGAGGATGAGCTGCGCCACCAGCTTGGATTGTACC
AGACCACGGGTAAGGGCAAGGTTCCTCTCGAGGGAATCCGGCCCATTGAG
GTGTTCATGTGCAGTGTTGTCATGAGACAGGCATCCGAAGAACTCGCCAT
CGGCAACAACCGCTTCACGACCTTCGACCTGGGTGGTCACCAGCAGGAAC
GACCGGGTTGCCATCCTCCAGCCCACTGCTCACCCGATCTACGATCTCCT
GGCCTCCCTTGGCCTGCTCAACAAGCACGCCAAGCTCCTGTTCCTCGGTC
TCGATAATGCCGGAAAGACGACCCTCCTGCACATGCTGAAGATGTGGCTC
ATTAACTGGTGATACGGTGAAGGTATCAGATGGCTGTCTCAATACGTCTA
ACTCGTCGTCTGTGGAAGGACTACTTCCCCGAAGTTAGCGGTATCGTCTT
CCTCGTTGACGCCAAGGACCACGAGCGTTTCCCCGAGTCCAAGGCCGAGC
TCGACGCTCTCCTTGCCATGGAGGAGCTGGCTAAGGTTCCTTTCCTGATC
CTCGGAAACAAGATCGACCACCCGGATGCTGTTAGCGAGGATGAGCTGCG
CCACCAGCTTGGATTGTACCAGACCACGGGTAAGGGCAAGGTTCCTCTCG
AGGGAATCCGGCCCATTGAGGTGTTCATGTGCAGTGTTGTCATGAGACAG
GCATCCGAAGAACTCGCCATCGGCAACAACCGCTTCACGACCTTCGACCT
GGGTGGTCACCAGCAGGAACGACCGGGTTGCCATCCTCCAGCCCACTGCT
CACCCGATCTACGATCTCCTGGCCTCCCTTGGCCTGCTCAACAAGCACGC
CAAGCTCCTGTTCCTCGGTCTCGATAATGCCGGAAAGACGACCCTCCTGC
ACATGCTGAAGATGTGGCTCATTAACTGGTGATACGGTGAAGGTATCAGA
TGGCTGTCTCAATACGTCTAACTCGTCGTCTGTGGAAGGACTACTTCCCC
GAAGTTAGCGGTATCGTCTTCCTCGTTGACGCCAAGGACCACGAGCGTTT
CCCCGAGTCCAAGGCCGAGCTCGACGCTCTCCTTGCCATGGAGGAGCTGG
CTAAGGTTCCTTTCCTGATCCTCGGAAACAAGATCGACCACCCGGATGCT
GTTAGCGAGGATGAGCTGCGCCACCAGCTTGGATTGTACCAGACCACGGG
TAAGGGCAAGGTTCCTCTCGAGGGAATCCGGCCCATTGAGGTGTTCATGT
GCAGTGTTGTCATGAGACAGGCATCCGAAGAACTCGCCATCGGCAACAAC
CGCTTCACGACCTTCGACCTGGGTGGTCACCAGCAGGAACGACCGGGTTG
CCATCCTCCAGCCCACTGCTCACCCGATCTACGATCTCCTGGCCTCCCTT
GGCCTGCTCAACAAGCACGCCAAGCTCCTGTTCCTCGGTCTCGATAATGC
CGGAAAGACGACCCTCCTGCACATGCTGAAGATGTGGCTCATTAACTGGT
GATACGGTGAAGGTATCAGATGGCTGTCTCAATACGTCTAACTCGTCGTC
TGTGGAAGGACTACTTCCCCGAAGTTAGCGGTATCGTCTTCCTCGTTGAC
GCCAAGGACCACGAGCGTTTCCCCGAGTCCAAGGCCGAGCTCGACGCTCT
CCTTGCCATGGAGGAGCTGGCTAAGGTTCCTTTCCTGATCCTCGGAAACA
AGATCGACCACCCGGATGCTGTTAGCGAGGATGAGCTGCGCCACCAGCTT
GGATTGTACCAGACCACGGGTAAGGGCAAGGTTCCTCTCGAGGGAATCCG
GCCCATTGAGGTGTTCATGTGCAGTGTTGTCATGAGACAGGCATCCGAAG
AACTCGCCATCGGCAACAACCGCTTCACGACCTTCGACCTGGGTGGTCAC
CAGCAGGAACGACCGGGTTGCCATCCTCCAGCCCACTGCTCACCCGATCT
ACGATCTCCTGGCCTCCCTTGGCCTGCTCAACAAGCACGCCAAGCTCCTG
TTCCTCGGTCTCGATAATGCCGGAAAGACGACCCTCCTGCACATGCTGAA
GATGTGGCTCATTAACTGGT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006886intracellular protein transport
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SAR1ATCC64974_19930Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_19930-T1ATCC64974_19930-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_19930-T1.cdsATCC64974_19930-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_19930-T1.exon6ATCC64974_19930-T1.exon6Aspergillus niger N402exon
ATCC64974_19930-T1.exon5ATCC64974_19930-T1.exon5Aspergillus niger N402exon
ATCC64974_19930-T1.exon4ATCC64974_19930-T1.exon4Aspergillus niger N402exon
ATCC64974_19930-T1.exon3ATCC64974_19930-T1.exon3Aspergillus niger N402exon
ATCC64974_19930-T1.exon2ATCC64974_19930-T1.exon2Aspergillus niger N402exon
ATCC64974_19930-T1.exon1ATCC64974_19930-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR006687
DBxrefInterPro:IPR005225
DBxrefInterPro:IPR006689
DBxrefPFAM:PF09439
DBxrefPFAM:PF08477
DBxrefPFAM:PF00071
DBxrefPFAM:PF01926
DBxrefPFAM:PF00025
ProductCOPII coat GTPase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000003.1supercontigOGUI01000003.1:2680569..2681700 -
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