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ATCC64974_19980-T1, ATCC64974_19980-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_19980-T1
Unique NameATCC64974_19980-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000003.1:2704247..2705495+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_19980-T1 ID=ATCC64974_19980-T1|Name=ATCC64974_19980-T1|organism=Aspergillus niger N402|type=mRNA|length=1249bp|location=Sequence derived from alignment at OGUI01000003.1:2704247..2705495+ (Aspergillus niger N402)
ATGAAACCCTCGAACGCGAATTCGCTGCACTTTCAGGTCCCTCAATAAAT
TCACCCCAACCTGAAAGACACGCCGTTATCCTTCCTACGCACTCAATTCC
TTCTGTCAGTTCTTTACGATTTCCAATCTTCACGATACTCCTTTCACCCG
CTAACCACCATCTACTTATCTCAGCCTCTCCTCTTTCTTCCACTTCTCCT
TCTAATTAGCTTCTCACCGTACTCACATACCATCACATCAAAAGTGAGCG
TCACAGCTTCAACTGGTTCAGAATTCTAAGCTAACAGCTTACTCAGTGCT
TGAAGCTCGCCTAGAACAAGCCAGTCTTCTGAAGCGCGTGAGTAACTCTA
CATCATATTGTTGCATGTCAATGCTTGATTGCTGACATTTGGTTTCTTTC
TTCAGGTCGTCGACGCCATCAAGGACCTGGTCCAAGACTGCAACTTCGAC
TGCAATGACTCCGGTATCTCACTTCAGGCCATGGACAACTCCCATGTTGC
TCTCGTCTCCATGATGCTCAAGGCCGAGGGATTCTCCCCTTACCGTTGCG
ACCGTAACATTGCCCTCGGTATCAACCTGCTCTCCCTGACCAAGGTCCTG
CGCGCCGCCCAGAATGAAGATATCCTCACTCTCAAGGCTGAGGACTCTCC
CGATGCCGTCAACCTGATGTTCGAGAGTGCCGAGACGGATAGACTTAGCG
AATATGATATTAAGTTGATGGATATTGACCAGGAGCACCTGGCCATCCCG
GAGACAGAGTACGCTGCTACGGTAGAGATGCCGGCAGCAGAGTTCCAGCG
TATCTGCAGGGATCTGAATGCCCTCTCTGAGTCCGGTATGTTCTTCTTAT
TGGCAACGGGTGTGATCCGCGACTAATTCAACTCCTAGTTGTCATTGAGG
CTACGAAGGAGGGTGTCAAGTTCTCCTGCCAGGGTGACATTGGCAGTGGC
TCCGTCACCGTCCGTCAGCACACCAACGTCGAGAACCCCGCACAGAACGT
CTCCATCTCCCTCACCGAACCCGTTGCCCTCACTTTCTCCCTCAAGTACC
TCGTCAACTTCTGCAAGGCTACCAACCTGTCGAACAAGGTCACCCTGTGC
CTGTCGCAGGAGGTGCCGCTCCTCGTTGAGTATGGCCTCGGTAGCGGTCA
TCTGAGATTCTACCTGGCTCCTAAGGTACGATGACTCCTCATCTGGCTTG
TTTGAGAGTTGTACTGACTTATGATATTTAGATTGGCGATGAGGAGTAA
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Coding sequence (CDS) from alignment at OGUI01000003.1:2704247..2705495+

>ATCC64974_19980-T1 ID=ATCC64974_19980-T1|Name=ATCC64974_19980-T1|organism=Aspergillus niger N402|type=CDS|length=5076bp|location=Sequence derived from alignment at OGUI01000003.1:2704247..2705495+ (Aspergillus niger N402)
ATGAAACCCTCGAACGCGAATTCGCTGCACTTTCAGCTTCTCACCGTACT
CACATACCATCACATCAAAATGCTTGAAGCTCGCCTAGAACAAGCCAGTC
TTCTGAAGCGCGTCGTCGACGCCATCAAGGACCTGGTCCAAGACTGCAAC
TTCGACTGCAATGACTCCGGTATCTCACTTCAGGCCATGGACAACTCCCA
TGTTGCTCTCGTCTCCATGATGCTCAAGGCCGAGGGATTCTCCCCTTACC
GTTGCGACCGTAACATTGCCCTCGGTATCAACCTGCTCTCCCTGACCAAG
GTCCTGCGCGCCGCCCAGAATGAAGATATCCTCACTCTCAAGGCTGAGGA
CTCTCCCGATGCCGTCAACCTGATGTTCGAGAGTGCCGAGACGGATAGAC
TTAGCGAATATGATATTAAGTTGATGGATATTGACCAGGAGCACCTGGCC
ATCCCGGAGACAGAGTACGCTGCTACGGTAGAGATGCCGGCAGCAGAGTT
CCAGCGTATCTGCAGGGATCTGAATGCCCTCTCTGAGTCCGTTGTCATTG
AGGCTACGAAGGAGGGTGTCAAGTTCTCCTGCCAGGGTGACATTGGCAGT
GGCTCCGTCACCGTCCGTCAGCACACCAACGTCGAGAACCCCGCACAGAA
CGTCTCCATCTCCCTCACCGAACCCGTTGCCCTCACTTTCTCCCTCAAGT
ACCTCGTCAACTTCTGCAAGGCTACCAACCTGTCGAACAAGGTCACCCTG
TGCCTGTCGCAGGAGGTGCCGCTCCTCGTTGAGTATGGCCTCGGTAGCGG
TCATCTGAGATTCTACCTGGCTCCTAAGATTGGCGATGAGGAGTAAATGA
AACCCTCGAACGCGAATTCGCTGCACTTTCAGCTTCTCACCGTACTCACA
TACCATCACATCAAAATGCTTGAAGCTCGCCTAGAACAAGCCAGTCTTCT
GAAGCGCGTCGTCGACGCCATCAAGGACCTGGTCCAAGACTGCAACTTCG
ACTGCAATGACTCCGGTATCTCACTTCAGGCCATGGACAACTCCCATGTT
GCTCTCGTCTCCATGATGCTCAAGGCCGAGGGATTCTCCCCTTACCGTTG
CGACCGTAACATTGCCCTCGGTATCAACCTGCTCTCCCTGACCAAGGTCC
TGCGCGCCGCCCAGAATGAAGATATCCTCACTCTCAAGGCTGAGGACTCT
CCCGATGCCGTCAACCTGATGTTCGAGAGTGCCGAGACGGATAGACTTAG
CGAATATGATATTAAGTTGATGGATATTGACCAGGAGCACCTGGCCATCC
CGGAGACAGAGTACGCTGCTACGGTAGAGATGCCGGCAGCAGAGTTCCAG
CGTATCTGCAGGGATCTGAATGCCCTCTCTGAGTCCGTTGTCATTGAGGC
TACGAAGGAGGGTGTCAAGTTCTCCTGCCAGGGTGACATTGGCAGTGGCT
CCGTCACCGTCCGTCAGCACACCAACGTCGAGAACCCCGCACAGAACGTC
TCCATCTCCCTCACCGAACCCGTTGCCCTCACTTTCTCCCTCAAGTACCT
CGTCAACTTCTGCAAGGCTACCAACCTGTCGAACAAGGTCACCCTGTGCC
TGTCGCAGGAGGTGCCGCTCCTCGTTGAGTATGGCCTCGGTAGCGGTCAT
CTGAGATTCTACCTGGCTCCTAAGATTGGCGATGAGGAGTAAATGAAACC
CTCGAACGCGAATTCGCTGCACTTTCAGCTTCTCACCGTACTCACATACC
ATCACATCAAAATGCTTGAAGCTCGCCTAGAACAAGCCAGTCTTCTGAAG
CGCGTCGTCGACGCCATCAAGGACCTGGTCCAAGACTGCAACTTCGACTG
CAATGACTCCGGTATCTCACTTCAGGCCATGGACAACTCCCATGTTGCTC
TCGTCTCCATGATGCTCAAGGCCGAGGGATTCTCCCCTTACCGTTGCGAC
CGTAACATTGCCCTCGGTATCAACCTGCTCTCCCTGACCAAGGTCCTGCG
CGCCGCCCAGAATGAAGATATCCTCACTCTCAAGGCTGAGGACTCTCCCG
ATGCCGTCAACCTGATGTTCGAGAGTGCCGAGACGGATAGACTTAGCGAA
TATGATATTAAGTTGATGGATATTGACCAGGAGCACCTGGCCATCCCGGA
GACAGAGTACGCTGCTACGGTAGAGATGCCGGCAGCAGAGTTCCAGCGTA
TCTGCAGGGATCTGAATGCCCTCTCTGAGTCCGTTGTCATTGAGGCTACG
AAGGAGGGTGTCAAGTTCTCCTGCCAGGGTGACATTGGCAGTGGCTCCGT
CACCGTCCGTCAGCACACCAACGTCGAGAACCCCGCACAGAACGTCTCCA
TCTCCCTCACCGAACCCGTTGCCCTCACTTTCTCCCTCAAGTACCTCGTC
AACTTCTGCAAGGCTACCAACCTGTCGAACAAGGTCACCCTGTGCCTGTC
GCAGGAGGTGCCGCTCCTCGTTGAGTATGGCCTCGGTAGCGGTCATCTGA
GATTCTACCTGGCTCCTAAGATTGGCGATGAGGAGTAAATGAAACCCTCG
AACGCGAATTCGCTGCACTTTCAGCTTCTCACCGTACTCACATACCATCA
CATCAAAATGCTTGAAGCTCGCCTAGAACAAGCCAGTCTTCTGAAGCGCG
TCGTCGACGCCATCAAGGACCTGGTCCAAGACTGCAACTTCGACTGCAAT
GACTCCGGTATCTCACTTCAGGCCATGGACAACTCCCATGTTGCTCTCGT
CTCCATGATGCTCAAGGCCGAGGGATTCTCCCCTTACCGTTGCGACCGTA
ACATTGCCCTCGGTATCAACCTGCTCTCCCTGACCAAGGTCCTGCGCGCC
GCCCAGAATGAAGATATCCTCACTCTCAAGGCTGAGGACTCTCCCGATGC
CGTCAACCTGATGTTCGAGAGTGCCGAGACGGATAGACTTAGCGAATATG
ATATTAAGTTGATGGATATTGACCAGGAGCACCTGGCCATCCCGGAGACA
GAGTACGCTGCTACGGTAGAGATGCCGGCAGCAGAGTTCCAGCGTATCTG
CAGGGATCTGAATGCCCTCTCTGAGTCCGTTGTCATTGAGGCTACGAAGG
AGGGTGTCAAGTTCTCCTGCCAGGGTGACATTGGCAGTGGCTCCGTCACC
GTCCGTCAGCACACCAACGTCGAGAACCCCGCACAGAACGTCTCCATCTC
CCTCACCGAACCCGTTGCCCTCACTTTCTCCCTCAAGTACCTCGTCAACT
TCTGCAAGGCTACCAACCTGTCGAACAAGGTCACCCTGTGCCTGTCGCAG
GAGGTGCCGCTCCTCGTTGAGTATGGCCTCGGTAGCGGTCATCTGAGATT
CTACCTGGCTCCTAAGATTGGCGATGAGGAGTAAATGAAACCCTCGAACG
CGAATTCGCTGCACTTTCAGCTTCTCACCGTACTCACATACCATCACATC
AAAATGCTTGAAGCTCGCCTAGAACAAGCCAGTCTTCTGAAGCGCGTCGT
CGACGCCATCAAGGACCTGGTCCAAGACTGCAACTTCGACTGCAATGACT
CCGGTATCTCACTTCAGGCCATGGACAACTCCCATGTTGCTCTCGTCTCC
ATGATGCTCAAGGCCGAGGGATTCTCCCCTTACCGTTGCGACCGTAACAT
TGCCCTCGGTATCAACCTGCTCTCCCTGACCAAGGTCCTGCGCGCCGCCC
AGAATGAAGATATCCTCACTCTCAAGGCTGAGGACTCTCCCGATGCCGTC
AACCTGATGTTCGAGAGTGCCGAGACGGATAGACTTAGCGAATATGATAT
TAAGTTGATGGATATTGACCAGGAGCACCTGGCCATCCCGGAGACAGAGT
ACGCTGCTACGGTAGAGATGCCGGCAGCAGAGTTCCAGCGTATCTGCAGG
GATCTGAATGCCCTCTCTGAGTCCGTTGTCATTGAGGCTACGAAGGAGGG
TGTCAAGTTCTCCTGCCAGGGTGACATTGGCAGTGGCTCCGTCACCGTCC
GTCAGCACACCAACGTCGAGAACCCCGCACAGAACGTCTCCATCTCCCTC
ACCGAACCCGTTGCCCTCACTTTCTCCCTCAAGTACCTCGTCAACTTCTG
CAAGGCTACCAACCTGTCGAACAAGGTCACCCTGTGCCTGTCGCAGGAGG
TGCCGCTCCTCGTTGAGTATGGCCTCGGTAGCGGTCATCTGAGATTCTAC
CTGGCTCCTAAGATTGGCGATGAGGAGTAAATGAAACCCTCGAACGCGAA
TTCGCTGCACTTTCAGCTTCTCACCGTACTCACATACCATCACATCAAAA
TGCTTGAAGCTCGCCTAGAACAAGCCAGTCTTCTGAAGCGCGTCGTCGAC
GCCATCAAGGACCTGGTCCAAGACTGCAACTTCGACTGCAATGACTCCGG
TATCTCACTTCAGGCCATGGACAACTCCCATGTTGCTCTCGTCTCCATGA
TGCTCAAGGCCGAGGGATTCTCCCCTTACCGTTGCGACCGTAACATTGCC
CTCGGTATCAACCTGCTCTCCCTGACCAAGGTCCTGCGCGCCGCCCAGAA
TGAAGATATCCTCACTCTCAAGGCTGAGGACTCTCCCGATGCCGTCAACC
TGATGTTCGAGAGTGCCGAGACGGATAGACTTAGCGAATATGATATTAAG
TTGATGGATATTGACCAGGAGCACCTGGCCATCCCGGAGACAGAGTACGC
TGCTACGGTAGAGATGCCGGCAGCAGAGTTCCAGCGTATCTGCAGGGATC
TGAATGCCCTCTCTGAGTCCGTTGTCATTGAGGCTACGAAGGAGGGTGTC
AAGTTCTCCTGCCAGGGTGACATTGGCAGTGGCTCCGTCACCGTCCGTCA
GCACACCAACGTCGAGAACCCCGCACAGAACGTCTCCATCTCCCTCACCG
AACCCGTTGCCCTCACTTTCTCCCTCAAGTACCTCGTCAACTTCTGCAAG
GCTACCAACCTGTCGAACAAGGTCACCCTGTGCCTGTCGCAGGAGGTGCC
GCTCCTCGTTGAGTATGGCCTCGGTAGCGGTCATCTGAGATTCTACCTGG
CTCCTAAGATTGGCGATGAGGAGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006275regulation of DNA replication
Vocabulary: Molecular Function
TermDefinition
GO:0030337DNA polymerase processivity factor activity
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PCN1ATCC64974_19980Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_19980-T1ATCC64974_19980-T1-proteinAspergillus niger N402polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_19980-T1.exon1ATCC64974_19980-T1.exon1Aspergillus niger N402exon
ATCC64974_19980-T1.exon2ATCC64974_19980-T1.exon2Aspergillus niger N402exon
ATCC64974_19980-T1.exon3ATCC64974_19980-T1.exon3Aspergillus niger N402exon
ATCC64974_19980-T1.exon4ATCC64974_19980-T1.exon4Aspergillus niger N402exon
ATCC64974_19980-T1.exon5ATCC64974_19980-T1.exon5Aspergillus niger N402exon
ATCC64974_19980-T1.exon6ATCC64974_19980-T1.exon6Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_19980-T1.cdsATCC64974_19980-T1.cdsAspergillus niger N402CDS


Properties
Property NameValue
DBxrefInterPro:IPR022659
DBxrefInterPro:IPR022648
DBxrefInterPro:IPR022649
DBxrefInterPro:IPR000730
DBxrefPFAM:PF04139
DBxrefPFAM:PF02144
DBxrefPFAM:PF00705
DBxrefPFAM:PF02747
ProductDNA polymerase delta processivity factor
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000003.1supercontigOGUI01000003.1:2704247..2705495 +
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