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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000003.1:2720410..2720993+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_20010-T1 ID=ATCC64974_20010-T1|Name=ATCC64974_20010-T1|organism=Aspergillus niger N402|type=mRNA|length=584bp|location=Sequence derived from alignment at OGUI01000003.1:2720410..2720993+ (Aspergillus niger N402)
ATGGTGAGCACCCTTGTCCTGCCGATCCTCTTGGTGGCTACCGTTGTCTC
CCAAGCGAACTCAACCAGACCATCGACGAATTGTGACAACTTCAGTCAAT
TAGACTAAGGGCAACCTCATCTAACGTCTGTATTCTCTTCAGGCCTCTCC
CCGTGCTGCTTCCCCCATGACCTCCGGTGCTGAGTCCGGTCCCGACTCCA
AGTCTGCTGGCGCTGGCACCGGCGCCTCTGCTGTCTCCTCCGTCAACCGC
CCTTCCTCTCCTACTCCTCCTGGTGGTCCCCGGGCTGCTATGCGTCGCCG
CGCGGCCGCTGACCACAAGGAGTCCCTCCGCAATGCCAGACCCAGCTCGA
CTCGCGCCGCCGGTGCTGGTGGCTCCTCCGGCACGATGCTCAAGCTCTAC
ACTGACGAGAGCCCCGGTCTGAGGGTTGACCCCGTTGTTGTCCTGGTTCT
CAGTCTGGGCTTCATTTTCTCCGTCGTTGGTCTCCACGGTAAGTGTGCTT
TCCGGGTTGTCTTCTGGGTGGTGAAGTGGCCTCTAACGCGCATATCCAGT
CATTGCCAAGATCACCCGCAAGTTCTCCTCATAA back to topCoding sequence (CDS) from alignment at OGUI01000003.1:2720410..2720993+ >ATCC64974_20010-T1 ID=ATCC64974_20010-T1|Name=ATCC64974_20010-T1|organism=Aspergillus niger N402|type=CDS|length=1152bp|location=Sequence derived from alignment at OGUI01000003.1:2720410..2720993+ (Aspergillus niger N402)
ATGGCCTCTCCCCGTGCTGCTTCCCCCATGACCTCCGGTGCTGAGTCCGG
TCCCGACTCCAAGTCTGCTGGCGCTGGCACCGGCGCCTCTGCTGTCTCCT
CCGTCAACCGCCCTTCCTCTCCTACTCCTCCTGGTGGTCCCCGGGCTGCT
ATGCGTCGCCGCGCGGCCGCTGACCACAAGGAGTCCCTCCGCAATGCCAG
ACCCAGCTCGACTCGCGCCGCCGGTGCTGGTGGCTCCTCCGGCACGATGC
TCAAGCTCTACACTGACGAGAGCCCCGGTCTGAGGGTTGACCCCGTTGTT
GTCCTGGTTCTCAGTCTGGGCTTCATTTTCTCCGTCGTTGGTCTCCACGT
CATTGCCAAGATCACCCGCAAGTTCTCCTCATAAATGGCCTCTCCCCGTG
CTGCTTCCCCCATGACCTCCGGTGCTGAGTCCGGTCCCGACTCCAAGTCT
GCTGGCGCTGGCACCGGCGCCTCTGCTGTCTCCTCCGTCAACCGCCCTTC
CTCTCCTACTCCTCCTGGTGGTCCCCGGGCTGCTATGCGTCGCCGCGCGG
CCGCTGACCACAAGGAGTCCCTCCGCAATGCCAGACCCAGCTCGACTCGC
GCCGCCGGTGCTGGTGGCTCCTCCGGCACGATGCTCAAGCTCTACACTGA
CGAGAGCCCCGGTCTGAGGGTTGACCCCGTTGTTGTCCTGGTTCTCAGTC
TGGGCTTCATTTTCTCCGTCGTTGGTCTCCACGTCATTGCCAAGATCACC
CGCAAGTTCTCCTCATAAATGGCCTCTCCCCGTGCTGCTTCCCCCATGAC
CTCCGGTGCTGAGTCCGGTCCCGACTCCAAGTCTGCTGGCGCTGGCACCG
GCGCCTCTGCTGTCTCCTCCGTCAACCGCCCTTCCTCTCCTACTCCTCCT
GGTGGTCCCCGGGCTGCTATGCGTCGCCGCGCGGCCGCTGACCACAAGGA
GTCCCTCCGCAATGCCAGACCCAGCTCGACTCGCGCCGCCGGTGCTGGTG
GCTCCTCCGGCACGATGCTCAAGCTCTACACTGACGAGAGCCCCGGTCTG
AGGGTTGACCCCGTTGTTGTCCTGGTTCTCAGTCTGGGCTTCATTTTCTC
CGTCGTTGGTCTCCACGTCATTGCCAAGATCACCCGCAAGTTCTCCTCAT
AA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005784 | Sec61 translocon complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006886 | intracellular protein transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_20010-T1 | ATCC64974_20010-T1-protein | Aspergillus niger N402 | polypeptide |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR016482 |
| DBxref | InterPro:IPR030671 |
| DBxref | PFAM:PF03911 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000003.1 | supercontig | OGUI01000003.1:2720410..2720993 + |
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