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ATCC64974_20330-T1, ATCC64974_20330-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_20330-T1
Unique NameATCC64974_20330-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000003.1:2804156..2805126-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_20330-T1 ID=ATCC64974_20330-T1|Name=ATCC64974_20330-T1|organism=Aspergillus niger N402|type=mRNA|length=971bp|location=Sequence derived from alignment at OGUI01000003.1:2804156..2805126- (Aspergillus niger N402)
ATGGGTGCCCTCAAGTACGTGGAAGAGATCCAGAAGAAGAAGCAGTCCGA
CGTGATTCGCTTCCTGCTGCGTGTCCGTTGCTGGGAGGTGAGAATTCCCC
CCTATATTGCGATCACTTAACATCCCGCCGGGTGCTCGTGTAGTTTGCCA
TAGGATGCCCTTCTTGAAATGAGAAATGGTGTTACTGGGCGGCTCGAAAC
GAATTTTTTCTTTCGCCGGCGGATGGATGTGGCACAAACAGAGAGACTTG
AGAGAAGCCTCATGTGTCTTGCTATACACTCGTTGAACTTTGCTGAGAGT
GCATCAATATAGCTCCGTCAACTGAACGCTATCCACCGTGCTTCCCGCCC
CTCTCGCCCCGACAAGGCTCGTCGTCTCGGCTACAAGGCCAAGCAGGGCT
ATGTTGTCTACCGTATCCGTGTGAGACGCGGTGGTCGTAAGAGACCCGCT
CCTAAGGGTGCCACCTACGGTATGTACAATCTTCGTCTTTGAGGGATTGG
AACCCAATCTAATTTGTTTGCGACTACAGGCAAGCCCACCAACATGGGTA
TCAACCAGCTCAAGTACCAGCGCGCTCTCCGTGCTACCGCTGAGGAGCGT
GTTGGCCGTCGCTGCGCCAACCTGCGTGTCCTGAACTCCTACTGGATCAA
CCAGGACTCCACCTACAAGTACTTCGAGGTCATCCTCGTCGACCCCCAGC
ACAAGGCCATCCGCCGCGATGCTCGCATCAACTGGATCTGCAACGCTGTC
CACAAGGTTCGTTATGAATGCCATTGGGGATTATATGTTCTCATTGATTA
CACGTTACTGACCGGGAATGTGTTTCATAGCACCGCGAGGCCCGTGGTCT
TACCGCCACCGGCAAGAAGTCCCGTGGTATCAACAAGGGCCACCGCTACA
ACAACACCCGCTCTGGCCGCCGCCACACCTGGAAGCGCCAGAACACCCAG
AGCTACTGGCGTTACCGTTAA
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Coding sequence (CDS) from alignment at OGUI01000003.1:2804156..2805126-

>ATCC64974_20330-T1 ID=ATCC64974_20330-T1|Name=ATCC64974_20330-T1|organism=Aspergillus niger N402|type=CDS|length=2448bp|location=Sequence derived from alignment at OGUI01000003.1:2804156..2805126- (Aspergillus niger N402)
CACCGCGAGGCCCGTGGTCTTACCGCCACCGGCAAGAAGTCCCGTGGTAT
CAACAAGGGCCACCGCTACAACAACACCCGCTCTGGCCGCCGCCACACCT
GGAAGCGCCAGAACACCCAGAGCTACTGGCGTTACCGTTAAGCAAGCCCA
CCAACATGGGTATCAACCAGCTCAAGTACCAGCGCGCTCTCCGTGCTACC
GCTGAGGAGCGTGTTGGCCGTCGCTGCGCCAACCTGCGTGTCCTGAACTC
CTACTGGATCAACCAGGACTCCACCTACAAGTACTTCGAGGTCATCCTCG
TCGACCCCCAGCACAAGGCCATCCGCCGCGATGCTCGCATCAACTGGATC
TGCAACGCTGTCCACAAGCTCCGTCAACTGAACGCTATCCACCGTGCTTC
CCGCCCCTCTCGCCCCGACAAGGCTCGTCGTCTCGGCTACAAGGCCAAGC
AGGGCTATGTTGTCTACCGTATCCGTGTGAGACGCGGTGGTCGTAAGAGA
CCCGCTCCTAAGGGTGCCACCTACGATGGGTGCCCTCAAGTACGTGGAAG
AGATCCAGAAGAAGAAGCAGTCCGACGTGATTCGCTTCCTGCTGCGTGTC
CGTTGCTGGGAGCACCGCGAGGCCCGTGGTCTTACCGCCACCGGCAAGAA
GTCCCGTGGTATCAACAAGGGCCACCGCTACAACAACACCCGCTCTGGCC
GCCGCCACACCTGGAAGCGCCAGAACACCCAGAGCTACTGGCGTTACCGT
TAAGCAAGCCCACCAACATGGGTATCAACCAGCTCAAGTACCAGCGCGCT
CTCCGTGCTACCGCTGAGGAGCGTGTTGGCCGTCGCTGCGCCAACCTGCG
TGTCCTGAACTCCTACTGGATCAACCAGGACTCCACCTACAAGTACTTCG
AGGTCATCCTCGTCGACCCCCAGCACAAGGCCATCCGCCGCGATGCTCGC
ATCAACTGGATCTGCAACGCTGTCCACAAGCTCCGTCAACTGAACGCTAT
CCACCGTGCTTCCCGCCCCTCTCGCCCCGACAAGGCTCGTCGTCTCGGCT
ACAAGGCCAAGCAGGGCTATGTTGTCTACCGTATCCGTGTGAGACGCGGT
GGTCGTAAGAGACCCGCTCCTAAGGGTGCCACCTACGATGGGTGCCCTCA
AGTACGTGGAAGAGATCCAGAAGAAGAAGCAGTCCGACGTGATTCGCTTC
CTGCTGCGTGTCCGTTGCTGGGAGCACCGCGAGGCCCGTGGTCTTACCGC
CACCGGCAAGAAGTCCCGTGGTATCAACAAGGGCCACCGCTACAACAACA
CCCGCTCTGGCCGCCGCCACACCTGGAAGCGCCAGAACACCCAGAGCTAC
TGGCGTTACCGTTAAGCAAGCCCACCAACATGGGTATCAACCAGCTCAAG
TACCAGCGCGCTCTCCGTGCTACCGCTGAGGAGCGTGTTGGCCGTCGCTG
CGCCAACCTGCGTGTCCTGAACTCCTACTGGATCAACCAGGACTCCACCT
ACAAGTACTTCGAGGTCATCCTCGTCGACCCCCAGCACAAGGCCATCCGC
CGCGATGCTCGCATCAACTGGATCTGCAACGCTGTCCACAAGCTCCGTCA
ACTGAACGCTATCCACCGTGCTTCCCGCCCCTCTCGCCCCGACAAGGCTC
GTCGTCTCGGCTACAAGGCCAAGCAGGGCTATGTTGTCTACCGTATCCGT
GTGAGACGCGGTGGTCGTAAGAGACCCGCTCCTAAGGGTGCCACCTACGA
TGGGTGCCCTCAAGTACGTGGAAGAGATCCAGAAGAAGAAGCAGTCCGAC
GTGATTCGCTTCCTGCTGCGTGTCCGTTGCTGGGAGCACCGCGAGGCCCG
TGGTCTTACCGCCACCGGCAAGAAGTCCCGTGGTATCAACAAGGGCCACC
GCTACAACAACACCCGCTCTGGCCGCCGCCACACCTGGAAGCGCCAGAAC
ACCCAGAGCTACTGGCGTTACCGTTAAGCAAGCCCACCAACATGGGTATC
AACCAGCTCAAGTACCAGCGCGCTCTCCGTGCTACCGCTGAGGAGCGTGT
TGGCCGTCGCTGCGCCAACCTGCGTGTCCTGAACTCCTACTGGATCAACC
AGGACTCCACCTACAAGTACTTCGAGGTCATCCTCGTCGACCCCCAGCAC
AAGGCCATCCGCCGCGATGCTCGCATCAACTGGATCTGCAACGCTGTCCA
CAAGCTCCGTCAACTGAACGCTATCCACCGTGCTTCCCGCCCCTCTCGCC
CCGACAAGGCTCGTCGTCTCGGCTACAAGGCCAAGCAGGGCTATGTTGTC
TACCGTATCCGTGTGAGACGCGGTGGTCGTAAGAGACCCGCTCCTAAGGG
TGCCACCTACGATGGGTGCCCTCAAGTACGTGGAAGAGATCCAGAAGAAG
AAGCAGTCCGACGTGATTCGCTTCCTGCTGCGTGTCCGTTGCTGGGAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPL15ATCC64974_20330Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_20330-T1ATCC64974_20330-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_20330-T1.cdsATCC64974_20330-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_20330-T1.exon4ATCC64974_20330-T1.exon4Aspergillus niger N402exon
ATCC64974_20330-T1.exon3ATCC64974_20330-T1.exon3Aspergillus niger N402exon
ATCC64974_20330-T1.exon2ATCC64974_20330-T1.exon2Aspergillus niger N402exon
ATCC64974_20330-T1.exon1ATCC64974_20330-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteBUSCO:EOG09264L0C
DBxrefInterPro:IPR012678
DBxrefInterPro:IPR020925
DBxrefInterPro:IPR024794
DBxrefInterPro:IPR000439
DBxrefPFAM:PF00827
Product60S ribosomal protein L15
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000003.1supercontigOGUI01000003.1:2804156..2805126 -
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