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ATCC64974_20410-T1, ATCC64974_20410-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_20410-T1
Unique NameATCC64974_20410-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000003.1:2830550..2831349-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_20410-T1 ID=ATCC64974_20410-T1|Name=ATCC64974_20410-T1|organism=Aspergillus niger N402|type=mRNA|length=800bp|location=Sequence derived from alignment at OGUI01000003.1:2830550..2831349- (Aspergillus niger N402)
ATGCGCTGCGCTAGCTTCGCCGTGGCCATCCTGGCCCTTTTCACTGGTCT
CTACAGCTACCTGAACGCGCGCCTGGAGCAGTTCTACATCTTCGATCCCT
CCCACCTGCACGACCTGTCGCAGCGCGCCATTGCCGCTCATGGCAATGAC
ACTCGCTCGGTGGTGAACTTCATCGTCTCCGAGCTGGGCGAGAAGGTCAC
CGACACGCACCTGAACCTGGACGAGGAATGGGTCTTCAACAACGCCGGTG
GTGCGATGGGGGCAATGTATATTATCCATGCTAGTGCGTCCCCTCTTTTG
CTCCATACCACCTCTATAATTATCTATAGTGCCTGAACTAAGCTTTGATT
CTCCTATAGGTATCACGGAGTACTTGATCATTTTCGGTATGGCTTCCCCT
GTATCCCGGATATTTTTATGCCCTCGATTGCACGAGCTAACTACTCTCTC
CCTGTCCATTAGGCACCGCTATTGGTACTGAGGGCCACACTGGCCGTCAC
ACGGCCGACGACTACTTCAACATTCTTCAGGGCACCCAGCTCGCCTACGT
CCCTGGATCCTACGAGCCCGAGGTTTACCCCCAGGGTAGCGTGCACCACC
TCCGCCGCGGTGAGGTCAAGCAGTACAAGATGGATGAGTCGTGCTTTGCT
CTGGAGTACGCCCGTGGCTGGATTCCCCCGATGCTCTTCTTCGGATACGC
CGATACCTTCTCCAGCACTCTCGACTTCCCGACTCTGTGGGCGACGTCCA
GAATCACTGGTCGCGAGATGATCTCCAACCTGCTCAAGGGCAAGATGTGA
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Coding sequence (CDS) from alignment at OGUI01000003.1:2830550..2831349-

>ATCC64974_20410-T1 ID=ATCC64974_20410-T1|Name=ATCC64974_20410-T1|organism=Aspergillus niger N402|type=CDS|length=1944bp|location=Sequence derived from alignment at OGUI01000003.1:2830550..2831349- (Aspergillus niger N402)
GCACCGCTATTGGTACTGAGGGCCACACTGGCCGTCACACGGCCGACGAC
TACTTCAACATTCTTCAGGGCACCCAGCTCGCCTACGTCCCTGGATCCTA
CGAGCCCGAGGTTTACCCCCAGGGTAGCGTGCACCACCTCCGCCGCGGTG
AGGTCAAGCAGTACAAGATGGATGAGTCGTGCTTTGCTCTGGAGTACGCC
CGTGGCTGGATTCCCCCGATGCTCTTCTTCGGATACGCCGATACCTTCTC
CAGCACTCTCGACTTCCCGACTCTGTGGGCGACGTCCAGAATCACTGGTC
GCGAGATGATCTCCAACCTGCTCAAGGGCAAGATGTGAGTATCACGGAGT
ACTTGATCATTTTCGATGCGCTGCGCTAGCTTCGCCGTGGCCATCCTGGC
CCTTTTCACTGGTCTCTACAGCTACCTGAACGCGCGCCTGGAGCAGTTCT
ACATCTTCGATCCCTCCCACCTGCACGACCTGTCGCAGCGCGCCATTGCC
GCTCATGGCAATGACACTCGCTCGGTGGTGAACTTCATCGTCTCCGAGCT
GGGCGAGAAGGTCACCGACACGCACCTGAACCTGGACGAGGAATGGGTCT
TCAACAACGCCGGTGGTGCGATGGGGGCAATGTATATTATCCATGCTAGC
ACCGCTATTGGTACTGAGGGCCACACTGGCCGTCACACGGCCGACGACTA
CTTCAACATTCTTCAGGGCACCCAGCTCGCCTACGTCCCTGGATCCTACG
AGCCCGAGGTTTACCCCCAGGGTAGCGTGCACCACCTCCGCCGCGGTGAG
GTCAAGCAGTACAAGATGGATGAGTCGTGCTTTGCTCTGGAGTACGCCCG
TGGCTGGATTCCCCCGATGCTCTTCTTCGGATACGCCGATACCTTCTCCA
GCACTCTCGACTTCCCGACTCTGTGGGCGACGTCCAGAATCACTGGTCGC
GAGATGATCTCCAACCTGCTCAAGGGCAAGATGTGAGTATCACGGAGTAC
TTGATCATTTTCGATGCGCTGCGCTAGCTTCGCCGTGGCCATCCTGGCCC
TTTTCACTGGTCTCTACAGCTACCTGAACGCGCGCCTGGAGCAGTTCTAC
ATCTTCGATCCCTCCCACCTGCACGACCTGTCGCAGCGCGCCATTGCCGC
TCATGGCAATGACACTCGCTCGGTGGTGAACTTCATCGTCTCCGAGCTGG
GCGAGAAGGTCACCGACACGCACCTGAACCTGGACGAGGAATGGGTCTTC
AACAACGCCGGTGGTGCGATGGGGGCAATGTATATTATCCATGCTAGCAC
CGCTATTGGTACTGAGGGCCACACTGGCCGTCACACGGCCGACGACTACT
TCAACATTCTTCAGGGCACCCAGCTCGCCTACGTCCCTGGATCCTACGAG
CCCGAGGTTTACCCCCAGGGTAGCGTGCACCACCTCCGCCGCGGTGAGGT
CAAGCAGTACAAGATGGATGAGTCGTGCTTTGCTCTGGAGTACGCCCGTG
GCTGGATTCCCCCGATGCTCTTCTTCGGATACGCCGATACCTTCTCCAGC
ACTCTCGACTTCCCGACTCTGTGGGCGACGTCCAGAATCACTGGTCGCGA
GATGATCTCCAACCTGCTCAAGGGCAAGATGTGAGTATCACGGAGTACTT
GATCATTTTCGATGCGCTGCGCTAGCTTCGCCGTGGCCATCCTGGCCCTT
TTCACTGGTCTCTACAGCTACCTGAACGCGCGCCTGGAGCAGTTCTACAT
CTTCGATCCCTCCCACCTGCACGACCTGTCGCAGCGCGCCATTGCCGCTC
ATGGCAATGACACTCGCTCGGTGGTGAACTTCATCGTCTCCGAGCTGGGC
GAGAAGGTCACCGACACGCACCTGAACCTGGACGAGGAATGGGTCTTCAA
CAACGCCGGTGGTGCGATGGGGGCAATGTATATTATCCATGCTA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ERG1ATCC64974_20410Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_20410-T1ATCC64974_20410-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_20410-T1.cdsATCC64974_20410-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_20410-T1.exon3ATCC64974_20410-T1.exon3Aspergillus niger N402exon
ATCC64974_20410-T1.exon2ATCC64974_20410-T1.exon2Aspergillus niger N402exon
ATCC64974_20410-T1.exon1ATCC64974_20410-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR006716
DBxrefPFAM:PF04622
ProductSqualene epoxidase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000003.1supercontigOGUI01000003.1:2830550..2831349 -
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