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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000003.1:2832455..2833246+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_20420-T1 ID=ATCC64974_20420-T1|Name=ATCC64974_20420-T1|organism=Aspergillus niger N402|type=mRNA|length=792bp|location=Sequence derived from alignment at OGUI01000003.1:2832455..2833246+ (Aspergillus niger N402)
ATGAAGGTTCTCGCTCTTTCCGCTCTTCTTTCCTTGGCTTCGGCCGCCTC
TATCAGCCGCCGTAGCGACTTCTGCGGCCAATGGGATACCGCCACCGCCG
GTGACTTCATCCTGTACAACGACCTCTGGGGTGAAGACAACGCCTCCAGC
GGCTCCCAGTGCACCGGCGTCGACTCGGCCAGCGGCAGCGAGATCGCCTG
GCACACCAGCTGGTCCTGGGAGGGTGGCAGCAGTGACGTCAAGAGCTACG
CCAACGCTGCTCTGCAGTTCACTGGTACTCAGCTGAGCTCCATCTCCAGC
ATCCCCTCCACCTGGAAGTGGACGTATGTTGCAGCCTAGACCTTCCGACC
GACCGACCGTCAGGACGCATGCTGACTCTTTGGGAATAGATACTCTGGCT
CCGACATCGTGGCCGACGTGGCCTATGACATGTTCCTGGGCTCGACCGCC
GACGCCTCCTCCGATGAGTACGAGATCATGGTCTGGCTTGCTGCCCTGGG
CGGTGCTGGCCCCATCTCGTCGACTGGCTCCACCATTGCCACCCCGACGA
TCAACGGCGTGACCTGGGACCTGTACACCGGCCCCAACGGCGACACCACC
GTCTACAGCTTCGTCGCCCAGTCGACCACCGAGGACTTCTCCGGCGACCT
GAACGACTTCTTCACCTACTTGGTGGACAACGAGGGTGTCTCTGACAGCC
TGTACCTGACCACCCTTGAGGCGGGTACCGAGCCCTTCACCGGTAGCGAC
GCTGAGCTGAAGGTGTCCGAGTACTCCGTTTCCATCGAGTAA back to topCoding sequence (CDS) from alignment at OGUI01000003.1:2832455..2833246+ >ATCC64974_20420-T1 ID=ATCC64974_20420-T1|Name=ATCC64974_20420-T1|organism=Aspergillus niger N402|type=CDS|length=1452bp|location=Sequence derived from alignment at OGUI01000003.1:2832455..2833246+ (Aspergillus niger N402)
ATGAAGGTTCTCGCTCTTTCCGCTCTTCTTTCCTTGGCTTCGGCCGCCTC
TATCAGCCGCCGTAGCGACTTCTGCGGCCAATGGGATACCGCCACCGCCG
GTGACTTCATCCTGTACAACGACCTCTGGGGTGAAGACAACGCCTCCAGC
GGCTCCCAGTGCACCGGCGTCGACTCGGCCAGCGGCAGCGAGATCGCCTG
GCACACCAGCTGGTCCTGGGAGGGTGGCAGCAGTGACGTCAAGAGCTACG
CCAACGCTGCTCTGCAGTTCACTGGTACTCAGCTGAGCTCCATCTCCAGC
ATCCCCTCCACCTGGAAGTGGACATACTCTGGCTCCGACATCGTGGCCGA
CGTGGCCTATGACATGTTCCTGGGCTCGACCGCCGACGCCTCCTCCGATG
AGTACGAGATCATGGTCTGGCTTGCTGCCCTGGGCGGTGCTGGCCCCATC
TCGTCGACTGGCTCCACCATTGCCACCCCGACGATCAACGGCGTGACCTG
GGACCTGTACACCGGCCCCAACGGCGACACCACCGTCTACAGCTTCGTCG
CCCAGTCGACCACCGAGGACTTCTCCGGCGACCTGAACGACTTCTTCACC
TACTTGGTGGACAACGAGGGTGTCTCTGACAGCCTGTACCTGACCACCCT
TGAGGCGGGTACCGAGCCCTTCACCGGTAGCGACGCTGAGCTGAAGGTGT
CCGAGTACTCCGTTTCCATCGAGTAAATGAAGGTTCTCGCTCTTTCCGCT
CTTCTTTCCTTGGCTTCGGCCGCCTCTATCAGCCGCCGTAGCGACTTCTG
CGGCCAATGGGATACCGCCACCGCCGGTGACTTCATCCTGTACAACGACC
TCTGGGGTGAAGACAACGCCTCCAGCGGCTCCCAGTGCACCGGCGTCGAC
TCGGCCAGCGGCAGCGAGATCGCCTGGCACACCAGCTGGTCCTGGGAGGG
TGGCAGCAGTGACGTCAAGAGCTACGCCAACGCTGCTCTGCAGTTCACTG
GTACTCAGCTGAGCTCCATCTCCAGCATCCCCTCCACCTGGAAGTGGACA
TACTCTGGCTCCGACATCGTGGCCGACGTGGCCTATGACATGTTCCTGGG
CTCGACCGCCGACGCCTCCTCCGATGAGTACGAGATCATGGTCTGGCTTG
CTGCCCTGGGCGGTGCTGGCCCCATCTCGTCGACTGGCTCCACCATTGCC
ACCCCGACGATCAACGGCGTGACCTGGGACCTGTACACCGGCCCCAACGG
CGACACCACCGTCTACAGCTTCGTCGCCCAGTCGACCACCGAGGACTTCT
CCGGCGACCTGAACGACTTCTTCACCTACTTGGTGGACAACGAGGGTGTC
TCTGACAGCCTGTACCTGACCACCCTTGAGGCGGGTACCGAGCCCTTCAC
CGGTAGCGACGCTGAGCTGAAGGTGTCCGAGTACTCCGTTTCCATCGAGT
AA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0000272 | polysaccharide catabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008810 | cellulase activity |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_20420-T1 | ATCC64974_20420-T1-protein | Aspergillus niger N402 | polypeptide |
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-15) |
| Note | CAZy:GH12 |
| DBxref | InterPro:IPR013320 |
| DBxref | InterPro:IPR002594 |
| DBxref | InterPro:IPR013319 |
| DBxref | PFAM:PF01670 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000003.1 | supercontig | OGUI01000003.1:2832455..2833246 + |
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