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ATCC64974_20890-T1, ATCC64974_20890-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_20890-T1
Unique NameATCC64974_20890-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000003.1:2977458..2979447-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_20890-T1 ID=ATCC64974_20890-T1|Name=ATCC64974_20890-T1|organism=Aspergillus niger N402|type=mRNA|length=1990bp|location=Sequence derived from alignment at OGUI01000003.1:2977458..2979447- (Aspergillus niger N402)
ATGGAGATCACCGACTTCATTTTCTCCCAGAGGGAGGAGAGTCTCTTGAC
GGGAAACTACAACGCTTATCGAGCACACACGACTCGCAAGTTGCACAGCG
CCCGCCTGCGACTTGGACAGACCACCCCCAAACGCAGCAAGTACATTGCC
AAACGACCTGTGACGGCGGAAGATGTGAACAGCAATGTGGAGTATGTCTC
TGAAGTCATCTTTGACGTATTCCTTCAAACACTCATACGGCTGGGTCAGC
TATGGAAATTGTACTAACACTCCGGATTTCTTAGATACGTCCACACCCTA
CTCATCAGCGCCGAACGGGCATGGGCGAACGCAATGCACATGAAGACCAC
TCACTCGGCAGACCCATCGGCCAAGGGGGTTAGCGGTACGACTAGGGGGC
ACATTATTTCGAAACTACGGAAGGCAGTTACATTTGCGAAGCAATTGGTG
CACGTTCTCGAGGATCAAGAAACTTCTGGTGCTGCAGACACTGATGTCCT
CGAAGCTCGTGCATATCTGGCGTCCCTCTTGGGAGCATACTTCTTGGAGA
AGCGCAATTGGGAGCAGTGTCTCCAAAACTACTCCGTGTCAAGAGTGATC
TATGCAGCTCTGGGTCAGCAAGTCAAGAAGGACGCCTTCCGAGACCTTCT
TTCCGGCACTGTCGACCCCAGTATAAGATACGCAGCATATCAGTTGAAGC
TCCCGCGGTCAAAGCCCATCCCGTCTTTGGCTCTTAGTTATTTCCCATCG
GACGCGACCATCAGGTCCGAAGTTGAGAAGTTGGACCCCAACTGTCTGAA
GGAGGATGCAGCGGGCACTCGGAGGACCGCTGACGGGGAGGTGCAGCAAC
TCCCTGGAAGCGTCACATGGAGATCGCATACAGTTGGCTTGGAAGATGCC
GCAATCTCACAGGCTCTTGCGTCCGCAGCGGCAGCTGAGTCTCGTCTCAC
TACGTGGCTTGCGGAAGGTGAGGGCAAAAACGCCTCCTCGAAAGATAAAG
CCGCTGCCTACGATAATGTTATCATCGCCAGTCAAGATGCCGTCGATGCT
ACAAAGACTGCGATCGATGACCTTGCCGGAGAGGGAGTTGACCCGAGTGA
TAAGAGAATGCAGGCTCTGCAAATAACGCGGACTGCTGTTAACTATGATC
TGGTTGGGTGGAGAATCGGACGGAACCGTGTCCTTTGCGGAGACAACGAC
GGCGTTTCATTCGAATCTGTCTCAACCAAGTTACCCAAGAGTGCCAAGGC
TACTGCCAAACAGGACGATGCTACGGGTAAGAAGCTGGCACGGCTGCGCG
AAAGAGTCGTCCTGTATGATTCTACCCTTCAAAGTATCGAGTTCATTCTT
GAGCTTCCCGGAGTTGCCGCGGATACGGCGTTTGTTCGCGAATTAGATGC
AAAGCGGCGGTACTTCCGTGCTTTAAGGTACGGCAGCGCAGCCCTTCCAT
ACCGATAACCTGCTAACTGGAGTCTTTCTTAGATGTCTGACCATTGGACG
GTCGCACGGAATCCTGGGCAAGTCTACCAATGCCCTCGCCCTATTTGCGC
AGGCTTTGGCCCTTGTCACAGAGACCGCACGGTCGCCGCAATCCTTGACT
GAAACGGAAGGACCACCGAGGCTGGATATTTCCCGTAGTCAGGTCCAGAC
TCTGGAGCTGACCTTGAAGGGCCTGGTTGCGCAATACCGCGGTTTGGTGA
CTTTGGAGAAGATGTCCGCTGAAGCACAGTCAAAATCTGTAACTCAGCGA
CCCGCAGTCGAACGTCTACACGATTTTGCCGGTGATGCTCTGGATTTGAC
CAACATTGTTCCTTACCCCCCTCAGATGCAGCCGATTCCAGTGAAGCCTT
TGTTCCTGGACGTGGCTTGGAACTACATCGAGTACCCTCGTCAAAGCACG
CCTGCTGCAGACAACAGTCAGGCTCAACCGGAACCACAGCCGGAAGAGAA
GAAGGGTGGACGACGCGGCTGGTTCGGCTTTGGTCGGTAG
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Coding sequence (CDS) from alignment at OGUI01000003.1:2977458..2979447-

>ATCC64974_20890-T1 ID=ATCC64974_20890-T1|Name=ATCC64974_20890-T1|organism=Aspergillus niger N402|type=CDS|length=5526bp|location=Sequence derived from alignment at OGUI01000003.1:2977458..2979447- (Aspergillus niger N402)
ATGTCTGACCATTGGACGGTCGCACGGAATCCTGGGCAAGTCTACCAATG
CCCTCGCCCTATTTGCGCAGGCTTTGGCCCTTGTCACAGAGACCGCACGG
TCGCCGCAATCCTTGACTGAAACGGAAGGACCACCGAGGCTGGATATTTC
CCGTAGTCAGGTCCAGACTCTGGAGCTGACCTTGAAGGGCCTGGTTGCGC
AATACCGCGGTTTGGTGACTTTGGAGAAGATGTCCGCTGAAGCACAGTCA
AAATCTGTAACTCAGCGACCCGCAGTCGAACGTCTACACGATTTTGCCGG
TGATGCTCTGGATTTGACCAACATTGTTCCTTACCCCCCTCAGATGCAGC
CGATTCCAGTGAAGCCTTTGTTCCTGGACGTGGCTTGGAACTACATCGAG
TACCCTCGTCAAAGCACGCCTGCTGCAGACAACAGTCAGGCTCAACCGGA
ACCACAGCCGGAAGAGAAGAAGGGTGGACGACGCGGCTGGTTCGGCTTTG
GTCGGTAGATACGTCCACACCCTACTCATCAGCGCCGAACGGGCATGGGC
GAACGCAATGCACATGAAGACCACTCACTCGGCAGACCCATCGGCCAAGG
GGGTTAGCGGTACGACTAGGGGGCACATTATTTCGAAACTACGGAAGGCA
GTTACATTTGCGAAGCAATTGGTGCACGTTCTCGAGGATCAAGAAACTTC
TGGTGCTGCAGACACTGATGTCCTCGAAGCTCGTGCATATCTGGCGTCCC
TCTTGGGAGCATACTTCTTGGAGAAGCGCAATTGGGAGCAGTGTCTCCAA
AACTACTCCGTGTCAAGAGTGATCTATGCAGCTCTGGGTCAGCAAGTCAA
GAAGGACGCCTTCCGAGACCTTCTTTCCGGCACTGTCGACCCCAGTATAA
GATACGCAGCATATCAGTTGAAGCTCCCGCGGTCAAAGCCCATCCCGTCT
TTGGCTCTTAGTTATTTCCCATCGGACGCGACCATCAGGTCCGAAGTTGA
GAAGTTGGACCCCAACTGTCTGAAGGAGGATGCAGCGGGCACTCGGAGGA
CCGCTGACGGGGAGGTGCAGCAACTCCCTGGAAGCGTCACATGGAGATCG
CATACAGTTGGCTTGGAAGATGCCGCAATCTCACAGGCTCTTGCGTCCGC
AGCGGCAGCTGAGTCTCGTCTCACTACGTGGCTTGCGGAAGGTGAGGGCA
AAAACGCCTCCTCGAAAGATAAAGCCGCTGCCTACGATAATGTTATCATC
GCCAGTCAAGATGCCGTCGATGCTACAAAGACTGCGATCGATGACCTTGC
CGGAGAGGGAGTTGACCCGAGTGATAAGAGAATGCAGGCTCTGCAAATAA
CGCGGACTGCTGTTAACTATGATCTGGTTGGGTGGAGAATCGGACGGAAC
CGTGTCCTTTGCGGAGACAACGACGGCGTTTCATTCGAATCTGTCTCAAC
CAAGTTACCCAAGAGTGCCAAGGCTACTGCCAAACAGGACGATGCTACGG
GTAAGAAGCTGGCACGGCTGCGCGAAAGAGTCGTCCTGTATGATTCTACC
CTTCAAAGTATCGAGTTCATTCTTGAGCTTCCCGGAGTTGCCGCGGATAC
GGCGTTTGTTCGCGAATTAGATGCAAAGCGGCGGTACTTCCGTGCTTTAA
GATGGAGATCACCGACTTCATTTTCTCCCAGAGGGAGGAGAGTCTCTTGA
CGGGAAACTACAACGCTTATCGAGCACACACGACTCGCAAGTTGCACAGC
GCCCGCCTGCGACTTGGACAGACCACCCCCAAACGCAGCAAGTACATTGC
CAAACGACCTGTGACGGCGGAAGATGTGAACAGCAATGTGGAATGTCTGA
CCATTGGACGGTCGCACGGAATCCTGGGCAAGTCTACCAATGCCCTCGCC
CTATTTGCGCAGGCTTTGGCCCTTGTCACAGAGACCGCACGGTCGCCGCA
ATCCTTGACTGAAACGGAAGGACCACCGAGGCTGGATATTTCCCGTAGTC
AGGTCCAGACTCTGGAGCTGACCTTGAAGGGCCTGGTTGCGCAATACCGC
GGTTTGGTGACTTTGGAGAAGATGTCCGCTGAAGCACAGTCAAAATCTGT
AACTCAGCGACCCGCAGTCGAACGTCTACACGATTTTGCCGGTGATGCTC
TGGATTTGACCAACATTGTTCCTTACCCCCCTCAGATGCAGCCGATTCCA
GTGAAGCCTTTGTTCCTGGACGTGGCTTGGAACTACATCGAGTACCCTCG
TCAAAGCACGCCTGCTGCAGACAACAGTCAGGCTCAACCGGAACCACAGC
CGGAAGAGAAGAAGGGTGGACGACGCGGCTGGTTCGGCTTTGGTCGGTAG
ATACGTCCACACCCTACTCATCAGCGCCGAACGGGCATGGGCGAACGCAA
TGCACATGAAGACCACTCACTCGGCAGACCCATCGGCCAAGGGGGTTAGC
GGTACGACTAGGGGGCACATTATTTCGAAACTACGGAAGGCAGTTACATT
TGCGAAGCAATTGGTGCACGTTCTCGAGGATCAAGAAACTTCTGGTGCTG
CAGACACTGATGTCCTCGAAGCTCGTGCATATCTGGCGTCCCTCTTGGGA
GCATACTTCTTGGAGAAGCGCAATTGGGAGCAGTGTCTCCAAAACTACTC
CGTGTCAAGAGTGATCTATGCAGCTCTGGGTCAGCAAGTCAAGAAGGACG
CCTTCCGAGACCTTCTTTCCGGCACTGTCGACCCCAGTATAAGATACGCA
GCATATCAGTTGAAGCTCCCGCGGTCAAAGCCCATCCCGTCTTTGGCTCT
TAGTTATTTCCCATCGGACGCGACCATCAGGTCCGAAGTTGAGAAGTTGG
ACCCCAACTGTCTGAAGGAGGATGCAGCGGGCACTCGGAGGACCGCTGAC
GGGGAGGTGCAGCAACTCCCTGGAAGCGTCACATGGAGATCGCATACAGT
TGGCTTGGAAGATGCCGCAATCTCACAGGCTCTTGCGTCCGCAGCGGCAG
CTGAGTCTCGTCTCACTACGTGGCTTGCGGAAGGTGAGGGCAAAAACGCC
TCCTCGAAAGATAAAGCCGCTGCCTACGATAATGTTATCATCGCCAGTCA
AGATGCCGTCGATGCTACAAAGACTGCGATCGATGACCTTGCCGGAGAGG
GAGTTGACCCGAGTGATAAGAGAATGCAGGCTCTGCAAATAACGCGGACT
GCTGTTAACTATGATCTGGTTGGGTGGAGAATCGGACGGAACCGTGTCCT
TTGCGGAGACAACGACGGCGTTTCATTCGAATCTGTCTCAACCAAGTTAC
CCAAGAGTGCCAAGGCTACTGCCAAACAGGACGATGCTACGGGTAAGAAG
CTGGCACGGCTGCGCGAAAGAGTCGTCCTGTATGATTCTACCCTTCAAAG
TATCGAGTTCATTCTTGAGCTTCCCGGAGTTGCCGCGGATACGGCGTTTG
TTCGCGAATTAGATGCAAAGCGGCGGTACTTCCGTGCTTTAAGATGGAGA
TCACCGACTTCATTTTCTCCCAGAGGGAGGAGAGTCTCTTGACGGGAAAC
TACAACGCTTATCGAGCACACACGACTCGCAAGTTGCACAGCGCCCGCCT
GCGACTTGGACAGACCACCCCCAAACGCAGCAAGTACATTGCCAAACGAC
CTGTGACGGCGGAAGATGTGAACAGCAATGTGGAATGTCTGACCATTGGA
CGGTCGCACGGAATCCTGGGCAAGTCTACCAATGCCCTCGCCCTATTTGC
GCAGGCTTTGGCCCTTGTCACAGAGACCGCACGGTCGCCGCAATCCTTGA
CTGAAACGGAAGGACCACCGAGGCTGGATATTTCCCGTAGTCAGGTCCAG
ACTCTGGAGCTGACCTTGAAGGGCCTGGTTGCGCAATACCGCGGTTTGGT
GACTTTGGAGAAGATGTCCGCTGAAGCACAGTCAAAATCTGTAACTCAGC
GACCCGCAGTCGAACGTCTACACGATTTTGCCGGTGATGCTCTGGATTTG
ACCAACATTGTTCCTTACCCCCCTCAGATGCAGCCGATTCCAGTGAAGCC
TTTGTTCCTGGACGTGGCTTGGAACTACATCGAGTACCCTCGTCAAAGCA
CGCCTGCTGCAGACAACAGTCAGGCTCAACCGGAACCACAGCCGGAAGAG
AAGAAGGGTGGACGACGCGGCTGGTTCGGCTTTGGTCGGTAGATACGTCC
ACACCCTACTCATCAGCGCCGAACGGGCATGGGCGAACGCAATGCACATG
AAGACCACTCACTCGGCAGACCCATCGGCCAAGGGGGTTAGCGGTACGAC
TAGGGGGCACATTATTTCGAAACTACGGAAGGCAGTTACATTTGCGAAGC
AATTGGTGCACGTTCTCGAGGATCAAGAAACTTCTGGTGCTGCAGACACT
GATGTCCTCGAAGCTCGTGCATATCTGGCGTCCCTCTTGGGAGCATACTT
CTTGGAGAAGCGCAATTGGGAGCAGTGTCTCCAAAACTACTCCGTGTCAA
GAGTGATCTATGCAGCTCTGGGTCAGCAAGTCAAGAAGGACGCCTTCCGA
GACCTTCTTTCCGGCACTGTCGACCCCAGTATAAGATACGCAGCATATCA
GTTGAAGCTCCCGCGGTCAAAGCCCATCCCGTCTTTGGCTCTTAGTTATT
TCCCATCGGACGCGACCATCAGGTCCGAAGTTGAGAAGTTGGACCCCAAC
TGTCTGAAGGAGGATGCAGCGGGCACTCGGAGGACCGCTGACGGGGAGGT
GCAGCAACTCCCTGGAAGCGTCACATGGAGATCGCATACAGTTGGCTTGG
AAGATGCCGCAATCTCACAGGCTCTTGCGTCCGCAGCGGCAGCTGAGTCT
CGTCTCACTACGTGGCTTGCGGAAGGTGAGGGCAAAAACGCCTCCTCGAA
AGATAAAGCCGCTGCCTACGATAATGTTATCATCGCCAGTCAAGATGCCG
TCGATGCTACAAAGACTGCGATCGATGACCTTGCCGGAGAGGGAGTTGAC
CCGAGTGATAAGAGAATGCAGGCTCTGCAAATAACGCGGACTGCTGTTAA
CTATGATCTGGTTGGGTGGAGAATCGGACGGAACCGTGTCCTTTGCGGAG
ACAACGACGGCGTTTCATTCGAATCTGTCTCAACCAAGTTACCCAAGAGT
GCCAAGGCTACTGCCAAACAGGACGATGCTACGGGTAAGAAGCTGGCACG
GCTGCGCGAAAGAGTCGTCCTGTATGATTCTACCCTTCAAAGTATCGAGT
TCATTCTTGAGCTTCCCGGAGTTGCCGCGGATACGGCGTTTGTTCGCGAA
TTAGATGCAAAGCGGCGGTACTTCCGTGCTTTAAGATGGAGATCACCGAC
TTCATTTTCTCCCAGAGGGAGGAGAGTCTCTTGACGGGAAACTACAACGC
TTATCGAGCACACACGACTCGCAAGTTGCACAGCGCCCGCCTGCGACTTG
GACAGACCACCCCCAAACGCAGCAAGTACATTGCCAAACGACCTGTGACG
GCGGAAGATGTGAACAGCAATGTGGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005786signal recognition particle, endoplasmic reticulum targeting
Vocabulary: Biological Process
TermDefinition
GO:0006614SRP-dependent cotranslational protein targeting to membrane
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:00083127S RNA binding
GO:0030942endoplasmic reticulum signal peptide binding
GO:0005047signal recognition particle binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_20890ATCC64974_20890Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_20890-T1ATCC64974_20890-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_20890-T1.cdsATCC64974_20890-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_20890-T1.exon3ATCC64974_20890-T1.exon3Aspergillus niger N402exon
ATCC64974_20890-T1.exon2ATCC64974_20890-T1.exon2Aspergillus niger N402exon
ATCC64974_20890-T1.exon1ATCC64974_20890-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR034652
DBxrefInterPro:IPR038253
DBxrefInterPro:IPR026258
DBxrefPFAM:PF16969
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000003.1supercontigOGUI01000003.1:2977458..2979447 -
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