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ATCC64974_20900-T1, ATCC64974_20900-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_20900-T1
Unique NameATCC64974_20900-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000003.1:2979934..2983821+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_20900-T1 ID=ATCC64974_20900-T1|Name=ATCC64974_20900-T1|organism=Aspergillus niger N402|type=mRNA|length=3888bp|location=Sequence derived from alignment at OGUI01000003.1:2979934..2983821+ (Aspergillus niger N402)
ATGCTGGAACGGGCTGCCGGATGTCTTGAGAACGCGGGACGGCGTTTCTT
CCGGGATCCCAACGGCGCTGTTCGAGGTCGGGGTTCGATATATTCAACTC
TTGGGCAATTCAGTAGCGCAGGGGCGGAGCTTTTGGTTTTCCTACAGGCA
ACGCAAAGATCCGCGTCGAATACTTCAACCGCCACCTCGACAACCGGAAG
GACAGCCACGGACCCGCGGGCCCCCGTTCTCGACTTTCTCTATCCCCCCC
GCACACAGGAGTTTATAGCGACATGCTTGATACGTTCGCCGAGAAGGCTT
GTCCCGCGACGGAAAAGGAAGGCCGTCCCTGGCCTTTCCAGAAATTACTC
GTCAGAGGCTGTTAGCCTAGACCGCAGGGTGGACGCTGAGGCTCACATGC
TCGACGACTCTGCTGAAATAATTGCCGATGAAGACCGCGCCATTGCCAAG
AATGAACTTCGAGCGTTATTGGATAAGGAGGAGATCGAAGATTCCGATAA
ATTATGGAGCCTTTTTTCGAAGGCTGGTCACCCTCTTGACCTGACTTCTG
CATTGCTGGCGGGAATTGGCAGCTCTGAGCGTGACGTTGATAGCAGAAGG
GCCAGACGACTCCTCAACTCTCTGCCTACCGAGTCCCGAACTTCTGAGGA
TTATTTGCACATGACCAAGTCTTGTATTGCCACGGGAAATTTTTCGGATG
TAATTGGGATATGTCGCGAAGCAGTCTCCTGTGGCCGCGGCGTCTCATGC
TGGGCATACTGTTTTGCACAATTTGTGAACTCTGAACGATGGGATTATGT
GCAAGATATTTGGAGATCGAGGCCGTTGGGCGACAACTCACTATGGCACG
CTGTCGCGCCTTGGCTACAGTTGTCTTCCGTGCATAAGCCTTTGTTTGCA
CTTGCTGATTATTTACAAGATCAGAGTCTCCACAGTCCAGTACGTCATGC
TACTCGCTTCATACTCAACAATGTATTTTCTAGCACGGAATTTGCCGAAG
CTACTGCGACGGAGACCCTACTAGCACTACTGCAAAAGTTCAATCATTTG
GACATGGTCACTTCCCGGAATTATTTTGATCTTATCAACATCCTCCAAGA
ATCAGAGCACCGATCGACGTTTGTTCGATCTATCGTGGTATATCGGAATT
TCCGTTGGCAGATGGAAGAAGAAACTCCACCCCGAAAGCTTCTGGCTAAG
CTGTTGAAGCGTCTTGCTTCGTTCGAGATCACAACTGGTATCTTATACTT
CCTCGATGAGATTTCCCAATTCCATCGCAAACCGACAGAGGACGTCTACA
GGCAGGCGCTTATTGTTTTTTCGAGAGCCGGTGATGTGGATAACGTCCAG
CATGTATTCGAGAGGTTTCTTTCGGACCACGGGAAGCCGCGAAGCCGCAA
ACTCGTGGCTCCGCTTCTCTATGTTTACGCCAGAATCGGCGATGTTGAAA
AGACTACGCGTCAATTCCGAAGAATTTCAGAAGAGTTCAACCTTCAACCA
AATATTATATGTTGGAACATCCTGCTTACGGCTTATTCCAAAGCAGGAGA
TCTTTCAGGGACCTTCGCCATGTTCAAGAAAATGATTGAGGAGGGTGTTG
AGCCCAGCTCGCACACTTTCGGTATAATGATGGGTCTTTGTGCTAACCGG
GGCGATGTCACTCATGTCCGCGATTTGCTCAGCCTGGCCCAACAACATAA
CGTGCAGATAACCGCCCCCATGATTGATACAGTTGTGGAGGCTTATTGCA
ACAACTCCGAGTGGGAGATGGCTGAGCACGTTGCGGAGACTTGCCTCGGC
CTCGACGTCAAGGGTTCTCGCGTAAGAATGTGGAATATCCTACTCTGGAA
TTATGCTTTCCGGATGGACCTGGAAGCTATCTCAAGGATACGCTCGCGGA
TGGATGCCGCAGGATTGGAGCCCGATGATATGACTTATTCTGCTCTCATG
CTCAGTCTTGTGCTTATAGGCCAGACGGATTCTGCCCGTCGCATCCTCAG
GGCACTCCACAGAGGCCGCCGCGTTTACGCTACTGAATTCCACTACGCAG
TCATCCTGTATGGCTATCTGAAGGATCGCAATCGGGATATGGTGCACATC
ATCTTCCGCGAAATTAAAGACAGATTCAACCAGCCGGGACTTGGCTCGAG
GCTCCTCGTGCTCAAGAGTCAGATCCAGCGAGATTTACAACTTTTGGCAC
AGGGTGGTCAGGTCGGCAACCACGCAAATATTCGTCTCGAAAACTCTGAG
AAGTTCCTCGCAGAGACTCTTGCGGATTACCACTCTACCAAATTGGCGAC
AAAGTACCCCTTGCTGGGTTCTGGTAGAATGTCTGCCAGGAAGGGATTCC
CTGCTGTTTACTACGAATATATGATCTCTGCCTATGGTATGAAGGGGGCT
TATCTGTCGGCTCGGAGGCTTTTCGATGACTATACCGCAAGTCATGCACC
TAAAGACTCCGACGAAGAAAATTACCATGATATCGCCCCTCTTCGTTTGC
TGTCTGCCTTGATGCTCGCACATTTGAAGGCTGAACAGTACCACCAGGTG
GAAGAATGCTGGAACTTGGCTTTCACCCGCGCTTTGAAGATAGCCAGTCC
CACTTCCCCTGATATTGATGAGTGGCTTAGCCGTCAACTTAACCCAGTTA
CACCGCCCTTACCATCTCATGCCGAACTCGTGGTGAATCCCGATTCCTCC
CAGGCTACGTCAAGCGAGCCAGCTACGACAAAGAAAGACCCGATCCTACC
GGCGTACCGCTTCATGCTATCTCGCCCGCTCTCACTGTATCTGCGTTCTT
TGGCTTATGGAAACGAAGTTTCGAAGATCTCCGAGGTTATAGCAAAGTAT
GTGGAGGCAGGCTTCTCCATGACAACCTTCAATTGGTCCACATTTGTGCA
GATGCTTGCATCCTCCGACAGATTGTCCGATCAGATTGAAGCTTTCACTG
TCTTTGAACATAAGTTCATGCCCAACTTCCCTGGGTGGGATAATCTTCGT
CGAGGATATGGGGCACGACCGCCGGGTGTGCCTTCAACCATTGATGCGAT
GGAGAATCCCAAACGTGCAAAGCCGCCTAATGTACTGGGCAAACTGGGCC
GGCGCTACTGGAGCAAAATCCAGCCGGACTTCATGCAGCCCACGTACGTG
TCCATGGTATATCTGGCTGCTGCATTGAGGCGACTTCGCGAACGAAGCAT
CCACGAGGGAGGCACGGACCTTCAAGCTATCTACGATGCGGCGCCGAAGA
CAATCGCAGCCGTTGCTAGACTGCCTTACCTCCGTGAGAAGTTCCAAGGT
GTGCTCCTCCGGCGTCGGCAGGAGAAAGGCGAGATGGTTGATGAACTTGG
ACGCGATCGCTATGTATGGACAGGCGGTATTCTTGGCGTTGGCGGCCTGA
CTAGGTCTAAGTCGCGGGTTGAGCCGACTGGTGATAAGGCGGAGCAAGAC
AGCAGCAATGTTCGAGTCGAATCAAAGGACGCCTCTTCGAATCCAATTGA
TGAGCCTCCGCTCAACGTTGGTATCTCTGAGCTGGACGATGATGAGCAAG
ATTCCGATGTTGCACCCTCGCCGTTCAGAAAGACCCTCGACTACCCCGAC
GAATACGACATGGAGGCCGAGACGCTGCTTGAGGAAAGAGGCAAGGAACT
CGGAACGAAAGAGGAATTGATGGACGATGAAAGTCTTGTGGAAGATGATG
AAGATGAGTTCGACGATCTGGAGGAGGACCTGGAGATGGAAGAAGAAGAA
GAAAAAGAAGAAGAGGAAGAAGACTGGATAGCAGAGGAGGCAGAAGAAGG
AGAAGATACTCCTGATGCCGCCGAACAGGACATATATGACCCTCAAGACG
AAGGGCAAATCCCTCAAGGCGAGGGTGAGACTCGTTGA
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Coding sequence (CDS) from alignment at OGUI01000003.1:2979934..2983821+

>ATCC64974_20900-T1 ID=ATCC64974_20900-T1|Name=ATCC64974_20900-T1|organism=Aspergillus niger N402|type=CDS|length=3888bp|location=Sequence derived from alignment at OGUI01000003.1:2979934..2983821+ (Aspergillus niger N402)
ATGCTGGAACGGGCTGCCGGATGTCTTGAGAACGCGGGACGGCGTTTCTT
CCGGGATCCCAACGGCGCTGTTCGAGGTCGGGGTTCGATATATTCAACTC
TTGGGCAATTCAGTAGCGCAGGGGCGGAGCTTTTGGTTTTCCTACAGGCA
ACGCAAAGATCCGCGTCGAATACTTCAACCGCCACCTCGACAACCGGAAG
GACAGCCACGGACCCGCGGGCCCCCGTTCTCGACTTTCTCTATCCCCCCC
GCACACAGGAGTTTATAGCGACATGCTTGATACGTTCGCCGAGAAGGCTT
GTCCCGCGACGGAAAAGGAAGGCCGTCCCTGGCCTTTCCAGAAATTACTC
GTCAGAGGCTGTTAGCCTAGACCGCAGGGTGGACGCTGAGGCTCACATGC
TCGACGACTCTGCTGAAATAATTGCCGATGAAGACCGCGCCATTGCCAAG
AATGAACTTCGAGCGTTATTGGATAAGGAGGAGATCGAAGATTCCGATAA
ATTATGGAGCCTTTTTTCGAAGGCTGGTCACCCTCTTGACCTGACTTCTG
CATTGCTGGCGGGAATTGGCAGCTCTGAGCGTGACGTTGATAGCAGAAGG
GCCAGACGACTCCTCAACTCTCTGCCTACCGAGTCCCGAACTTCTGAGGA
TTATTTGCACATGACCAAGTCTTGTATTGCCACGGGAAATTTTTCGGATG
TAATTGGGATATGTCGCGAAGCAGTCTCCTGTGGCCGCGGCGTCTCATGC
TGGGCATACTGTTTTGCACAATTTGTGAACTCTGAACGATGGGATTATGT
GCAAGATATTTGGAGATCGAGGCCGTTGGGCGACAACTCACTATGGCACG
CTGTCGCGCCTTGGCTACAGTTGTCTTCCGTGCATAAGCCTTTGTTTGCA
CTTGCTGATTATTTACAAGATCAGAGTCTCCACAGTCCAGTACGTCATGC
TACTCGCTTCATACTCAACAATGTATTTTCTAGCACGGAATTTGCCGAAG
CTACTGCGACGGAGACCCTACTAGCACTACTGCAAAAGTTCAATCATTTG
GACATGGTCACTTCCCGGAATTATTTTGATCTTATCAACATCCTCCAAGA
ATCAGAGCACCGATCGACGTTTGTTCGATCTATCGTGGTATATCGGAATT
TCCGTTGGCAGATGGAAGAAGAAACTCCACCCCGAAAGCTTCTGGCTAAG
CTGTTGAAGCGTCTTGCTTCGTTCGAGATCACAACTGGTATCTTATACTT
CCTCGATGAGATTTCCCAATTCCATCGCAAACCGACAGAGGACGTCTACA
GGCAGGCGCTTATTGTTTTTTCGAGAGCCGGTGATGTGGATAACGTCCAG
CATGTATTCGAGAGGTTTCTTTCGGACCACGGGAAGCCGCGAAGCCGCAA
ACTCGTGGCTCCGCTTCTCTATGTTTACGCCAGAATCGGCGATGTTGAAA
AGACTACGCGTCAATTCCGAAGAATTTCAGAAGAGTTCAACCTTCAACCA
AATATTATATGTTGGAACATCCTGCTTACGGCTTATTCCAAAGCAGGAGA
TCTTTCAGGGACCTTCGCCATGTTCAAGAAAATGATTGAGGAGGGTGTTG
AGCCCAGCTCGCACACTTTCGGTATAATGATGGGTCTTTGTGCTAACCGG
GGCGATGTCACTCATGTCCGCGATTTGCTCAGCCTGGCCCAACAACATAA
CGTGCAGATAACCGCCCCCATGATTGATACAGTTGTGGAGGCTTATTGCA
ACAACTCCGAGTGGGAGATGGCTGAGCACGTTGCGGAGACTTGCCTCGGC
CTCGACGTCAAGGGTTCTCGCGTAAGAATGTGGAATATCCTACTCTGGAA
TTATGCTTTCCGGATGGACCTGGAAGCTATCTCAAGGATACGCTCGCGGA
TGGATGCCGCAGGATTGGAGCCCGATGATATGACTTATTCTGCTCTCATG
CTCAGTCTTGTGCTTATAGGCCAGACGGATTCTGCCCGTCGCATCCTCAG
GGCACTCCACAGAGGCCGCCGCGTTTACGCTACTGAATTCCACTACGCAG
TCATCCTGTATGGCTATCTGAAGGATCGCAATCGGGATATGGTGCACATC
ATCTTCCGCGAAATTAAAGACAGATTCAACCAGCCGGGACTTGGCTCGAG
GCTCCTCGTGCTCAAGAGTCAGATCCAGCGAGATTTACAACTTTTGGCAC
AGGGTGGTCAGGTCGGCAACCACGCAAATATTCGTCTCGAAAACTCTGAG
AAGTTCCTCGCAGAGACTCTTGCGGATTACCACTCTACCAAATTGGCGAC
AAAGTACCCCTTGCTGGGTTCTGGTAGAATGTCTGCCAGGAAGGGATTCC
CTGCTGTTTACTACGAATATATGATCTCTGCCTATGGTATGAAGGGGGCT
TATCTGTCGGCTCGGAGGCTTTTCGATGACTATACCGCAAGTCATGCACC
TAAAGACTCCGACGAAGAAAATTACCATGATATCGCCCCTCTTCGTTTGC
TGTCTGCCTTGATGCTCGCACATTTGAAGGCTGAACAGTACCACCAGGTG
GAAGAATGCTGGAACTTGGCTTTCACCCGCGCTTTGAAGATAGCCAGTCC
CACTTCCCCTGATATTGATGAGTGGCTTAGCCGTCAACTTAACCCAGTTA
CACCGCCCTTACCATCTCATGCCGAACTCGTGGTGAATCCCGATTCCTCC
CAGGCTACGTCAAGCGAGCCAGCTACGACAAAGAAAGACCCGATCCTACC
GGCGTACCGCTTCATGCTATCTCGCCCGCTCTCACTGTATCTGCGTTCTT
TGGCTTATGGAAACGAAGTTTCGAAGATCTCCGAGGTTATAGCAAAGTAT
GTGGAGGCAGGCTTCTCCATGACAACCTTCAATTGGTCCACATTTGTGCA
GATGCTTGCATCCTCCGACAGATTGTCCGATCAGATTGAAGCTTTCACTG
TCTTTGAACATAAGTTCATGCCCAACTTCCCTGGGTGGGATAATCTTCGT
CGAGGATATGGGGCACGACCGCCGGGTGTGCCTTCAACCATTGATGCGAT
GGAGAATCCCAAACGTGCAAAGCCGCCTAATGTACTGGGCAAACTGGGCC
GGCGCTACTGGAGCAAAATCCAGCCGGACTTCATGCAGCCCACGTACGTG
TCCATGGTATATCTGGCTGCTGCATTGAGGCGACTTCGCGAACGAAGCAT
CCACGAGGGAGGCACGGACCTTCAAGCTATCTACGATGCGGCGCCGAAGA
CAATCGCAGCCGTTGCTAGACTGCCTTACCTCCGTGAGAAGTTCCAAGGT
GTGCTCCTCCGGCGTCGGCAGGAGAAAGGCGAGATGGTTGATGAACTTGG
ACGCGATCGCTATGTATGGACAGGCGGTATTCTTGGCGTTGGCGGCCTGA
CTAGGTCTAAGTCGCGGGTTGAGCCGACTGGTGATAAGGCGGAGCAAGAC
AGCAGCAATGTTCGAGTCGAATCAAAGGACGCCTCTTCGAATCCAATTGA
TGAGCCTCCGCTCAACGTTGGTATCTCTGAGCTGGACGATGATGAGCAAG
ATTCCGATGTTGCACCCTCGCCGTTCAGAAAGACCCTCGACTACCCCGAC
GAATACGACATGGAGGCCGAGACGCTGCTTGAGGAAAGAGGCAAGGAACT
CGGAACGAAAGAGGAATTGATGGACGATGAAAGTCTTGTGGAAGATGATG
AAGATGAGTTCGACGATCTGGAGGAGGACCTGGAGATGGAAGAAGAAGAA
GAAAAAGAAGAAGAGGAAGAAGACTGGATAGCAGAGGAGGCAGAAGAAGG
AGAAGATACTCCTGATGCCGCCGAACAGGACATATATGACCCTCAAGACG
AAGGGCAAATCCCTCAAGGCGAGGGTGAGACTCGTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_20900ATCC64974_20900Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_20900-T1.exon1ATCC64974_20900-T1.exon1Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_20900-T1.cdsATCC64974_20900-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_20900-T1ATCC64974_20900-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR002885
DBxrefInterPro:IPR011990
DBxrefPFAM:PF17177
DBxrefPFAM:PF13812
DBxrefPFAM:PF13041
DBxrefPFAM:PF01535
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000003.1supercontigOGUI01000003.1:2979934..2983821 +
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