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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000001.1:657994..659011- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_2100-T1 ID=ATCC64974_2100-T1|Name=ATCC64974_2100-T1|organism=Aspergillus niger N402|type=mRNA|length=1018bp|location=Sequence derived from alignment at OGUI01000001.1:657994..659011- (Aspergillus niger N402)
ATGCGATTGACCGTTGAACTGATCCAAAATTCCCTGTCCTACATTAACCC
GCTCAAAGACCGCGAGCTAGATCTTCGAGGTGCGTTCCAGCCACCTGTCC
TGAAAAGAACAGATACTACACTTTTGAGATGAGCTTGATTGATATCGGTT
TTGTGTTTGAGTCGTATAGGGCACAAGATACCCGCTATTGAGAACTTGGG
TATTGCCAAGGTAACCTCTTCCCACCACCTCATTTCTCTCTTGGAATGTC
TTCGCGGCATTGTATATGGTATAGAGGCTAAGAAAGGAACGGTAGGACCA
AGATGCAATCGACCTAACAGACAACGATATCACCTCCCTCGGAAACTTTC
CCTTCTTTCCTCGCCTCCGCACCCTCCTCCTCGCGCGTAACCGAGTCAAG
CAGATCCAGCCGACGATATCGACCTCAGTGCCGAATCTGAGCGCGCTGGT
GTTGACGGCGAATAACATGAACGAGTTGGCGGATTTGGACCCGCTTAGAA
ATCTGGCCCAGTTGACGCATTTGGTGTTGCTGGAGAATCCTGTTACCAGG
AAGGAGGTAAGCTTCCCCTTTTCTTCTATTTCCTTTCCTAGCGAGATCAA
AGCAAAGCAAAGTCTAACATAAATGGTATTGGTGTAGCACTATCGCTACT
ACGTCATCTGGCGCATCCCCAGCGTCCGCTTCCTCGACTACCAGAAAGTG
AAGGACGCGGAGCGCGAAAAAGCCACCGAGTTGTTCGGCACAGCGGAGGA
GCCGTCTGCGCTGGCGTCTAAGATCATGGGAATCAAGTCTCGCACGTTTG
ATGTGCCCTCGGGCGCTGGGGGTGCGGATCGTGGTGCGCCCGCGGATAAG
GCGGTGCGGGTGAAGTTGACGGAGAAGGAGAGGAAGAGGGTGGAGAAGAT
GATTCGCGAGGCGAAGAGTTTGCAGGAGATTTCGCGGTTGGAGAAGGAGT
TGAATGAGGGCAGGATACCTGGAGGTGCGTTGGATTATGCTGATAGTGAT
GAGGAGATGCAGACATAG back to topCoding sequence (CDS) from alignment at OGUI01000001.1:657994..659011- >ATCC64974_2100-T1 ID=ATCC64974_2100-T1|Name=ATCC64974_2100-T1|organism=Aspergillus niger N402|type=CDS|length=3048bp|location=Sequence derived from alignment at OGUI01000001.1:657994..659011- (Aspergillus niger N402)
CACTATCGCTACTACGTCATCTGGCGCATCCCCAGCGTCCGCTTCCTCGA
CTACCAGAAAGTGAAGGACGCGGAGCGCGAAAAAGCCACCGAGTTGTTCG
GCACAGCGGAGGAGCCGTCTGCGCTGGCGTCTAAGATCATGGGAATCAAG
TCTCGCACGTTTGATGTGCCCTCGGGCGCTGGGGGTGCGGATCGTGGTGC
GCCCGCGGATAAGGCGGTGCGGGTGAAGTTGACGGAGAAGGAGAGGAAGA
GGGTGGAGAAGATGATTCGCGAGGCGAAGAGTTTGCAGGAGATTTCGCGG
TTGGAGAAGGAGTTGAATGAGGGCAGGATACCTGGAGGTGCGTTGGATTA
TGCTGATAGTGATGAGGAGATGCAGACATAGGACCAAGATGCAATCGACC
TAACAGACAACGATATCACCTCCCTCGGAAACTTTCCCTTCTTTCCTCGC
CTCCGCACCCTCCTCCTCGCGCGTAACCGAGTCAAGCAGATCCAGCCGAC
GATATCGACCTCAGTGCCGAATCTGAGCGCGCTGGTGTTGACGGCGAATA
ACATGAACGAGTTGGCGGATTTGGACCCGCTTAGAAATCTGGCCCAGTTG
ACGCATTTGGTGTTGCTGGAGAATCCTGTTACCAGGAAGGAGGGCACAAG
ATACCCGCTATTGAGAACTTGGGTATTGCCAAGATGCGATTGACCGTTGA
ACTGATCCAAAATTCCCTGTCCTACATTAACCCGCTCAAAGACCGCGAGC
TAGATCTTCGAGCACTATCGCTACTACGTCATCTGGCGCATCCCCAGCGT
CCGCTTCCTCGACTACCAGAAAGTGAAGGACGCGGAGCGCGAAAAAGCCA
CCGAGTTGTTCGGCACAGCGGAGGAGCCGTCTGCGCTGGCGTCTAAGATC
ATGGGAATCAAGTCTCGCACGTTTGATGTGCCCTCGGGCGCTGGGGGTGC
GGATCGTGGTGCGCCCGCGGATAAGGCGGTGCGGGTGAAGTTGACGGAGA
AGGAGAGGAAGAGGGTGGAGAAGATGATTCGCGAGGCGAAGAGTTTGCAG
GAGATTTCGCGGTTGGAGAAGGAGTTGAATGAGGGCAGGATACCTGGAGG
TGCGTTGGATTATGCTGATAGTGATGAGGAGATGCAGACATAGGACCAAG
ATGCAATCGACCTAACAGACAACGATATCACCTCCCTCGGAAACTTTCCC
TTCTTTCCTCGCCTCCGCACCCTCCTCCTCGCGCGTAACCGAGTCAAGCA
GATCCAGCCGACGATATCGACCTCAGTGCCGAATCTGAGCGCGCTGGTGT
TGACGGCGAATAACATGAACGAGTTGGCGGATTTGGACCCGCTTAGAAAT
CTGGCCCAGTTGACGCATTTGGTGTTGCTGGAGAATCCTGTTACCAGGAA
GGAGGGCACAAGATACCCGCTATTGAGAACTTGGGTATTGCCAAGATGCG
ATTGACCGTTGAACTGATCCAAAATTCCCTGTCCTACATTAACCCGCTCA
AAGACCGCGAGCTAGATCTTCGAGCACTATCGCTACTACGTCATCTGGCG
CATCCCCAGCGTCCGCTTCCTCGACTACCAGAAAGTGAAGGACGCGGAGC
GCGAAAAAGCCACCGAGTTGTTCGGCACAGCGGAGGAGCCGTCTGCGCTG
GCGTCTAAGATCATGGGAATCAAGTCTCGCACGTTTGATGTGCCCTCGGG
CGCTGGGGGTGCGGATCGTGGTGCGCCCGCGGATAAGGCGGTGCGGGTGA
AGTTGACGGAGAAGGAGAGGAAGAGGGTGGAGAAGATGATTCGCGAGGCG
AAGAGTTTGCAGGAGATTTCGCGGTTGGAGAAGGAGTTGAATGAGGGCAG
GATACCTGGAGGTGCGTTGGATTATGCTGATAGTGATGAGGAGATGCAGA
CATAGGACCAAGATGCAATCGACCTAACAGACAACGATATCACCTCCCTC
GGAAACTTTCCCTTCTTTCCTCGCCTCCGCACCCTCCTCCTCGCGCGTAA
CCGAGTCAAGCAGATCCAGCCGACGATATCGACCTCAGTGCCGAATCTGA
GCGCGCTGGTGTTGACGGCGAATAACATGAACGAGTTGGCGGATTTGGAC
CCGCTTAGAAATCTGGCCCAGTTGACGCATTTGGTGTTGCTGGAGAATCC
TGTTACCAGGAAGGAGGGCACAAGATACCCGCTATTGAGAACTTGGGTAT
TGCCAAGATGCGATTGACCGTTGAACTGATCCAAAATTCCCTGTCCTACA
TTAACCCGCTCAAAGACCGCGAGCTAGATCTTCGAGCACTATCGCTACTA
CGTCATCTGGCGCATCCCCAGCGTCCGCTTCCTCGACTACCAGAAAGTGA
AGGACGCGGAGCGCGAAAAAGCCACCGAGTTGTTCGGCACAGCGGAGGAG
CCGTCTGCGCTGGCGTCTAAGATCATGGGAATCAAGTCTCGCACGTTTGA
TGTGCCCTCGGGCGCTGGGGGTGCGGATCGTGGTGCGCCCGCGGATAAGG
CGGTGCGGGTGAAGTTGACGGAGAAGGAGAGGAAGAGGGTGGAGAAGATG
ATTCGCGAGGCGAAGAGTTTGCAGGAGATTTCGCGGTTGGAGAAGGAGTT
GAATGAGGGCAGGATACCTGGAGGTGCGTTGGATTATGCTGATAGTGATG
AGGAGATGCAGACATAGGACCAAGATGCAATCGACCTAACAGACAACGAT
ATCACCTCCCTCGGAAACTTTCCCTTCTTTCCTCGCCTCCGCACCCTCCT
CCTCGCGCGTAACCGAGTCAAGCAGATCCAGCCGACGATATCGACCTCAG
TGCCGAATCTGAGCGCGCTGGTGTTGACGGCGAATAACATGAACGAGTTG
GCGGATTTGGACCCGCTTAGAAATCTGGCCCAGTTGACGCATTTGGTGTT
GCTGGAGAATCCTGTTACCAGGAAGGAGGGCACAAGATACCCGCTATTGA
GAACTTGGGTATTGCCAAGATGCGATTGACCGTTGAACTGATCCAAAATT
CCCTGTCCTACATTAACCCGCTCAAAGACCGCGAGCTAGATCTTCGAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_2100-T1 | ATCC64974_2100-T1-protein | Aspergillus niger N402 | polypeptide |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR032675 |
| DBxref | PFAM:PF14580 |
| DBxref | PFAM:PF13855 |
| Product | U2 snRNP complex subunit |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000001.1 | supercontig | OGUI01000001.1:657994..659011 - |
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