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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000003.1:3010290..3012824+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_21010-T1 ID=ATCC64974_21010-T1|Name=ATCC64974_21010-T1|organism=Aspergillus niger N402|type=mRNA|length=2535bp|location=Sequence derived from alignment at OGUI01000003.1:3010290..3012824+ (Aspergillus niger N402)
ATGACCTCCGCAGCGCACAGCAGTCATTCACCCGCCGGGAATGGGGTGAC
TAAGCGCAAGTCAGGTACGCTCTGCAATGTCTATGAAGGACTTGGCATAT
ATCTGCTATTCTTCTCCTGGTTCTAATGAAAATTCCCCTCTAGGCTCCGC
AGCCTGCGTCCACTGCCATCGGCGCAAAGTCCGATGCGATGCCCGCATCG
TCGGCCTCCCATGCTCCAATTGCCGTTCCGCGGGAAAGACCGACTGTCGG
ATTCACGAAAAGAAGAAGCGTCTGGCGGTGCGATCAATCCTCGACCCCGT
TCCGATCCGCTGTCGACCACCTCCTGCTTCTTCTGAGCCTACACACAGAC
ACTCTCTGCCTCTCACGGCTACAACCCCACCTGACGCTTTCACCACCACC
TTTCGCGGCGTCCAACCGGAAGTGACAACACCTGTCGCACATCCCGCATC
AAGTCTTCATAATCTTCATCAAACGCTTAATCATAATGTTAATCACCACC
CTCCCCATAATGGCGCCGGGTCAGCTGCAGAATCTCCGACATATAACCGT
CCCCCGGGCCAGGATGTCTCGGCCGAATCGGACTCCCACGCGGATTTGGA
GAAACGACTAGTGAAGCTCATCGATGAGGAAGAATCGGGCAGTCGGGAGA
TTCGTCGGGGTGTGCGAGCTATATACGTGGGCCATGAGCTGTCGAACATG
TCTTTCTTGATCCGTCAGCAACGCGACAAGGATGACGACGTCTATCACTT
TGCAGGCAATGAGATTCCGCGACGACAGTTAAGGACCGGCCATGATCAGC
TCCTCATGGATGCTCTCACTTTGCCTGAACCGGCCCTAGCAGATGAACTG
GTGCAAGCTTACTTTGACCACGTCAACCCAGGGTATCCTATCATTGACGA
GGACTTGTTCATGGCGCAGTATCGCAACCGGGACCCTGCTGATCCTCCCC
CGATATTGCTGCTACAAGCGATTCTGCTAGTGGGAGCCCATGTCACTCGT
CCCAAAGCGGAACGCGATGCCCTCAAGGATATTTTCTTCCGTCGTGCCAA
GTGGCTGTTTGATTCACGTATTGAGCGTAATCGCGATATCCTGGTGCAAG
CTGCTCTACTTTTGACTTGGCACTCGGATGGTGCCGACGATGATGTCGCA
GCGAATGCGCACTACTGGGTGGGTGTAGCTGCCAGGATTGCTACTGGCCT
CGGAATGCACCGAAATCCTATCTCTAGCCGGTTTGTCTCCCGTGATCGCC
GGATGTGGAGGAGGCTATGGCACATTATAGTGCAATTCGACGTTATGGTA
TCACTTTCGTATGGTCGACCGCAGGCAATGTAAGCAGATAGCCCCCTCCT
TACCCTCCCGATCGGCCGCTGACTGCTTCCGACAACAGAAACCTAGAAGA
CTCCGACGTGTCTCCATTGACAATCTCTGACTTCGAGGGCTGCGGACCTC
GTGTCCAATCCGACTACGTGATCCATTTCACTGAGCTCTCAGTAATGATC
TCGTACATCGTTCGAAGCCGCTTCGGACTACGAGTGAGCGCAGAGCGTCG
CAAAGCCGTCCTCCTAGAAGCCGACGAAGCCCTCGCCAATTGGTCCCTGA
AGCTGCCCGATAAACTACGTCTCCGAGCGTCCGACATGGACCCCTGGTCC
GCCATGCTCCATCTCACCTACAACAACTTCCTGATCCTCCTCCACCGCCC
ACACCCCCGAGCATCCGCCTACTCAGATGACTACGGCCCGCACGATGCCG
AAATCTGCAGCGCAGCCGCAGGAGTCATCACCTCCATCTTCGAAGAACTC
CGATTAAACGACCGCCTCAAGTTCCTCTGGTACTCCGGCGTCCACACCCT
CTTCACAGCCATGATCCAAGTCCGCGTCGAACTCCGCTTCTCCAACCCCG
TCCTAGCAATCAACGCCCTCCGCCGCTTCGACTCAGCCTCCTACTCCCTC
CGCGAACTAGCAAGCTATTGGTTCCACGCAAACACCATCCTCCGCCTCTT
CGAAGACTCCAGACGCCTCCAAGAAGACCTCCGAATGGCCACCAGCGAAC
GACCACCCCGCCGCTTCAGCAACCCTCAAGACCAACTCAAAACAACCCTA
CACTCCACCACCACTTCCACCTCCGCACCCACAGCAATGCAGACACCAAG
ACCCCCCAACCCAACCCCGACAGACCGCCCTCTTCCCTTCGAAGTCCCCA
CCCCAGACTCCTCCACGAACCACCTCCCAACAAGCCCTCACCACAGCCAC
CCTCAACCTCAATCTCAGCCCCAACAACATCACCATCTAGACGCCTGGAT
CCCCCCACCTCCGCCATCCGCCACCATGACCCCCGTCGTCGACGCCATCG
ACGCCGACGCGCCCCGCGAATCTCTCGACTGGCGCCAACTCTTCTCCTTC
ACGGATCTGGACCAGCCCGTGCTGCCTATGGCCATGGAAGGGCTACCAGA
GTTAGAGGATGAATGGCGTCAGATCTACTGGCAAGAGACTCCGATGTCAG
ATCTTCTGTTAGATGGGGGGTGGATGCATGGATAA back to topCoding sequence (CDS) from alignment at OGUI01000003.1:3010290..3012824+ >ATCC64974_21010-T1 ID=ATCC64974_21010-T1|Name=ATCC64974_21010-T1|organism=Aspergillus niger N402|type=CDS|length=7191bp|location=Sequence derived from alignment at OGUI01000003.1:3010290..3012824+ (Aspergillus niger N402)
ATGACCTCCGCAGCGCACAGCAGTCATTCACCCGCCGGGAATGGGGTGAC
TAAGCGCAAGTCAGGCTCCGCAGCCTGCGTCCACTGCCATCGGCGCAAAG
TCCGATGCGATGCCCGCATCGTCGGCCTCCCATGCTCCAATTGCCGTTCC
GCGGGAAAGACCGACTGTCGGATTCACGAAAAGAAGAAGCGTCTGGCGGT
GCGATCAATCCTCGACCCCGTTCCGATCCGCTGTCGACCACCTCCTGCTT
CTTCTGAGCCTACACACAGACACTCTCTGCCTCTCACGGCTACAACCCCA
CCTGACGCTTTCACCACCACCTTTCGCGGCGTCCAACCGGAAGTGACAAC
ACCTGTCGCACATCCCGCATCAAGTCTTCATAATCTTCATCAAACGCTTA
ATCATAATGTTAATCACCACCCTCCCCATAATGGCGCCGGGTCAGCTGCA
GAATCTCCGACATATAACCGTCCCCCGGGCCAGGATGTCTCGGCCGAATC
GGACTCCCACGCGGATTTGGAGAAACGACTAGTGAAGCTCATCGATGAGG
AAGAATCGGGCAGTCGGGAGATTCGTCGGGGTGTGCGAGCTATATACGTG
GGCCATGAGCTGTCGAACATGTCTTTCTTGATCCGTCAGCAACGCGACAA
GGATGACGACGTCTATCACTTTGCAGGCAATGAGATTCCGCGACGACAGT
TAAGGACCGGCCATGATCAGCTCCTCATGGATGCTCTCACTTTGCCTGAA
CCGGCCCTAGCAGATGAACTGGTGCAAGCTTACTTTGACCACGTCAACCC
AGGGTATCCTATCATTGACGAGGACTTGTTCATGGCGCAGTATCGCAACC
GGGACCCTGCTGATCCTCCCCCGATATTGCTGCTACAAGCGATTCTGCTA
GTGGGAGCCCATGTCACTCGTCCCAAAGCGGAACGCGATGCCCTCAAGGA
TATTTTCTTCCGTCGTGCCAAGTGGCTGTTTGATTCACGTATTGAGCGTA
ATCGCGATATCCTGGTGCAAGCTGCTCTACTTTTGACTTGGCACTCGGAT
GGTGCCGACGATGATGTCGCAGCGAATGCGCACTACTGGGTGGGTGTAGC
TGCCAGGATTGCTACTGGCCTCGGAATGCACCGAAATCCTATCTCTAGCC
GGTTTGTCTCCCGTGATCGCCGGATGTGGAGGAGGCTATGGCACATTATA
GTGCAATTCGACGTTATGGTATCACTTTCGTATGGTCGACCGCAGGCAAT
AAACCTAGAAGACTCCGACGTGTCTCCATTGACAATCTCTGACTTCGAGG
GCTGCGGACCTCGTGTCCAATCCGACTACGTGATCCATTTCACTGAGCTC
TCAGTAATGATCTCGTACATCGTTCGAAGCCGCTTCGGACTACGAGTGAG
CGCAGAGCGTCGCAAAGCCGTCCTCCTAGAAGCCGACGAAGCCCTCGCCA
ATTGGTCCCTGAAGCTGCCCGATAAACTACGTCTCCGAGCGTCCGACATG
GACCCCTGGTCCGCCATGCTCCATCTCACCTACAACAACTTCCTGATCCT
CCTCCACCGCCCACACCCCCGAGCATCCGCCTACTCAGATGACTACGGCC
CGCACGATGCCGAAATCTGCAGCGCAGCCGCAGGAGTCATCACCTCCATC
TTCGAAGAACTCCGATTAAACGACCGCCTCAAGTTCCTCTGGTACTCCGG
CGTCCACACCCTCTTCACAGCCATGATCCAAGTCCGCGTCGAACTCCGCT
TCTCCAACCCCGTCCTAGCAATCAACGCCCTCCGCCGCTTCGACTCAGCC
TCCTACTCCCTCCGCGAACTAGCAAGCTATTGGTTCCACGCAAACACCAT
CCTCCGCCTCTTCGAAGACTCCAGACGCCTCCAAGAAGACCTCCGAATGG
CCACCAGCGAACGACCACCCCGCCGCTTCAGCAACCCTCAAGACCAACTC
AAAACAACCCTACACTCCACCACCACTTCCACCTCCGCACCCACAGCAAT
GCAGACACCAAGACCCCCCAACCCAACCCCGACAGACCGCCCTCTTCCCT
TCGAAGTCCCCACCCCAGACTCCTCCACGAACCACCTCCCAACAAGCCCT
CACCACAGCCACCCTCAACCTCAATCTCAGCCCCAACAACATCACCATCT
AGACGCCTGGATCCCCCCACCTCCGCCATCCGCCACCATGACCCCCGTCG
TCGACGCCATCGACGCCGACGCGCCCCGCGAATCTCTCGACTGGCGCCAA
CTCTTCTCCTTCACGGATCTGGACCAGCCCGTGCTGCCTATGGCCATGGA
AGGGCTACCAGAGTTAGAGGATGAATGGCGTCAGATCTACTGGCAAGAGA
CTCCGATGTCAGATCTTCTGTTAGATGGGGGGTGGATGCATGGATAAATG
ACCTCCGCAGCGCACAGCAGTCATTCACCCGCCGGGAATGGGGTGACTAA
GCGCAAGTCAGGCTCCGCAGCCTGCGTCCACTGCCATCGGCGCAAAGTCC
GATGCGATGCCCGCATCGTCGGCCTCCCATGCTCCAATTGCCGTTCCGCG
GGAAAGACCGACTGTCGGATTCACGAAAAGAAGAAGCGTCTGGCGGTGCG
ATCAATCCTCGACCCCGTTCCGATCCGCTGTCGACCACCTCCTGCTTCTT
CTGAGCCTACACACAGACACTCTCTGCCTCTCACGGCTACAACCCCACCT
GACGCTTTCACCACCACCTTTCGCGGCGTCCAACCGGAAGTGACAACACC
TGTCGCACATCCCGCATCAAGTCTTCATAATCTTCATCAAACGCTTAATC
ATAATGTTAATCACCACCCTCCCCATAATGGCGCCGGGTCAGCTGCAGAA
TCTCCGACATATAACCGTCCCCCGGGCCAGGATGTCTCGGCCGAATCGGA
CTCCCACGCGGATTTGGAGAAACGACTAGTGAAGCTCATCGATGAGGAAG
AATCGGGCAGTCGGGAGATTCGTCGGGGTGTGCGAGCTATATACGTGGGC
CATGAGCTGTCGAACATGTCTTTCTTGATCCGTCAGCAACGCGACAAGGA
TGACGACGTCTATCACTTTGCAGGCAATGAGATTCCGCGACGACAGTTAA
GGACCGGCCATGATCAGCTCCTCATGGATGCTCTCACTTTGCCTGAACCG
GCCCTAGCAGATGAACTGGTGCAAGCTTACTTTGACCACGTCAACCCAGG
GTATCCTATCATTGACGAGGACTTGTTCATGGCGCAGTATCGCAACCGGG
ACCCTGCTGATCCTCCCCCGATATTGCTGCTACAAGCGATTCTGCTAGTG
GGAGCCCATGTCACTCGTCCCAAAGCGGAACGCGATGCCCTCAAGGATAT
TTTCTTCCGTCGTGCCAAGTGGCTGTTTGATTCACGTATTGAGCGTAATC
GCGATATCCTGGTGCAAGCTGCTCTACTTTTGACTTGGCACTCGGATGGT
GCCGACGATGATGTCGCAGCGAATGCGCACTACTGGGTGGGTGTAGCTGC
CAGGATTGCTACTGGCCTCGGAATGCACCGAAATCCTATCTCTAGCCGGT
TTGTCTCCCGTGATCGCCGGATGTGGAGGAGGCTATGGCACATTATAGTG
CAATTCGACGTTATGGTATCACTTTCGTATGGTCGACCGCAGGCAATAAA
CCTAGAAGACTCCGACGTGTCTCCATTGACAATCTCTGACTTCGAGGGCT
GCGGACCTCGTGTCCAATCCGACTACGTGATCCATTTCACTGAGCTCTCA
GTAATGATCTCGTACATCGTTCGAAGCCGCTTCGGACTACGAGTGAGCGC
AGAGCGTCGCAAAGCCGTCCTCCTAGAAGCCGACGAAGCCCTCGCCAATT
GGTCCCTGAAGCTGCCCGATAAACTACGTCTCCGAGCGTCCGACATGGAC
CCCTGGTCCGCCATGCTCCATCTCACCTACAACAACTTCCTGATCCTCCT
CCACCGCCCACACCCCCGAGCATCCGCCTACTCAGATGACTACGGCCCGC
ACGATGCCGAAATCTGCAGCGCAGCCGCAGGAGTCATCACCTCCATCTTC
GAAGAACTCCGATTAAACGACCGCCTCAAGTTCCTCTGGTACTCCGGCGT
CCACACCCTCTTCACAGCCATGATCCAAGTCCGCGTCGAACTCCGCTTCT
CCAACCCCGTCCTAGCAATCAACGCCCTCCGCCGCTTCGACTCAGCCTCC
TACTCCCTCCGCGAACTAGCAAGCTATTGGTTCCACGCAAACACCATCCT
CCGCCTCTTCGAAGACTCCAGACGCCTCCAAGAAGACCTCCGAATGGCCA
CCAGCGAACGACCACCCCGCCGCTTCAGCAACCCTCAAGACCAACTCAAA
ACAACCCTACACTCCACCACCACTTCCACCTCCGCACCCACAGCAATGCA
GACACCAAGACCCCCCAACCCAACCCCGACAGACCGCCCTCTTCCCTTCG
AAGTCCCCACCCCAGACTCCTCCACGAACCACCTCCCAACAAGCCCTCAC
CACAGCCACCCTCAACCTCAATCTCAGCCCCAACAACATCACCATCTAGA
CGCCTGGATCCCCCCACCTCCGCCATCCGCCACCATGACCCCCGTCGTCG
ACGCCATCGACGCCGACGCGCCCCGCGAATCTCTCGACTGGCGCCAACTC
TTCTCCTTCACGGATCTGGACCAGCCCGTGCTGCCTATGGCCATGGAAGG
GCTACCAGAGTTAGAGGATGAATGGCGTCAGATCTACTGGCAAGAGACTC
CGATGTCAGATCTTCTGTTAGATGGGGGGTGGATGCATGGATAAATGACC
TCCGCAGCGCACAGCAGTCATTCACCCGCCGGGAATGGGGTGACTAAGCG
CAAGTCAGGCTCCGCAGCCTGCGTCCACTGCCATCGGCGCAAAGTCCGAT
GCGATGCCCGCATCGTCGGCCTCCCATGCTCCAATTGCCGTTCCGCGGGA
AAGACCGACTGTCGGATTCACGAAAAGAAGAAGCGTCTGGCGGTGCGATC
AATCCTCGACCCCGTTCCGATCCGCTGTCGACCACCTCCTGCTTCTTCTG
AGCCTACACACAGACACTCTCTGCCTCTCACGGCTACAACCCCACCTGAC
GCTTTCACCACCACCTTTCGCGGCGTCCAACCGGAAGTGACAACACCTGT
CGCACATCCCGCATCAAGTCTTCATAATCTTCATCAAACGCTTAATCATA
ATGTTAATCACCACCCTCCCCATAATGGCGCCGGGTCAGCTGCAGAATCT
CCGACATATAACCGTCCCCCGGGCCAGGATGTCTCGGCCGAATCGGACTC
CCACGCGGATTTGGAGAAACGACTAGTGAAGCTCATCGATGAGGAAGAAT
CGGGCAGTCGGGAGATTCGTCGGGGTGTGCGAGCTATATACGTGGGCCAT
GAGCTGTCGAACATGTCTTTCTTGATCCGTCAGCAACGCGACAAGGATGA
CGACGTCTATCACTTTGCAGGCAATGAGATTCCGCGACGACAGTTAAGGA
CCGGCCATGATCAGCTCCTCATGGATGCTCTCACTTTGCCTGAACCGGCC
CTAGCAGATGAACTGGTGCAAGCTTACTTTGACCACGTCAACCCAGGGTA
TCCTATCATTGACGAGGACTTGTTCATGGCGCAGTATCGCAACCGGGACC
CTGCTGATCCTCCCCCGATATTGCTGCTACAAGCGATTCTGCTAGTGGGA
GCCCATGTCACTCGTCCCAAAGCGGAACGCGATGCCCTCAAGGATATTTT
CTTCCGTCGTGCCAAGTGGCTGTTTGATTCACGTATTGAGCGTAATCGCG
ATATCCTGGTGCAAGCTGCTCTACTTTTGACTTGGCACTCGGATGGTGCC
GACGATGATGTCGCAGCGAATGCGCACTACTGGGTGGGTGTAGCTGCCAG
GATTGCTACTGGCCTCGGAATGCACCGAAATCCTATCTCTAGCCGGTTTG
TCTCCCGTGATCGCCGGATGTGGAGGAGGCTATGGCACATTATAGTGCAA
TTCGACGTTATGGTATCACTTTCGTATGGTCGACCGCAGGCAATAAACCT
AGAAGACTCCGACGTGTCTCCATTGACAATCTCTGACTTCGAGGGCTGCG
GACCTCGTGTCCAATCCGACTACGTGATCCATTTCACTGAGCTCTCAGTA
ATGATCTCGTACATCGTTCGAAGCCGCTTCGGACTACGAGTGAGCGCAGA
GCGTCGCAAAGCCGTCCTCCTAGAAGCCGACGAAGCCCTCGCCAATTGGT
CCCTGAAGCTGCCCGATAAACTACGTCTCCGAGCGTCCGACATGGACCCC
TGGTCCGCCATGCTCCATCTCACCTACAACAACTTCCTGATCCTCCTCCA
CCGCCCACACCCCCGAGCATCCGCCTACTCAGATGACTACGGCCCGCACG
ATGCCGAAATCTGCAGCGCAGCCGCAGGAGTCATCACCTCCATCTTCGAA
GAACTCCGATTAAACGACCGCCTCAAGTTCCTCTGGTACTCCGGCGTCCA
CACCCTCTTCACAGCCATGATCCAAGTCCGCGTCGAACTCCGCTTCTCCA
ACCCCGTCCTAGCAATCAACGCCCTCCGCCGCTTCGACTCAGCCTCCTAC
TCCCTCCGCGAACTAGCAAGCTATTGGTTCCACGCAAACACCATCCTCCG
CCTCTTCGAAGACTCCAGACGCCTCCAAGAAGACCTCCGAATGGCCACCA
GCGAACGACCACCCCGCCGCTTCAGCAACCCTCAAGACCAACTCAAAACA
ACCCTACACTCCACCACCACTTCCACCTCCGCACCCACAGCAATGCAGAC
ACCAAGACCCCCCAACCCAACCCCGACAGACCGCCCTCTTCCCTTCGAAG
TCCCCACCCCAGACTCCTCCACGAACCACCTCCCAACAAGCCCTCACCAC
AGCCACCCTCAACCTCAATCTCAGCCCCAACAACATCACCATCTAGACGC
CTGGATCCCCCCACCTCCGCCATCCGCCACCATGACCCCCGTCGTCGACG
CCATCGACGCCGACGCGCCCCGCGAATCTCTCGACTGGCGCCAACTCTTC
TCCTTCACGGATCTGGACCAGCCCGTGCTGCCTATGGCCATGGAAGGGCT
ACCAGAGTTAGAGGATGAATGGCGTCAGATCTACTGGCAAGAGACTCCGA
TGTCAGATCTTCTGTTAGATGGGGGGTGGATGCATGGATAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
| GO:0006351 | transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0003677 | DNA binding |
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_21010-T1 | ATCC64974_21010-T1-protein | Aspergillus niger N402 | polypeptide |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| DBxref | InterPro:IPR007219 |
| DBxref | PFAM:PF00172 |
| DBxref | PFAM:PF04082 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000003.1 | supercontig | OGUI01000003.1:3010290..3012824 + |
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