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ATCC64974_21150-T1, ATCC64974_21150-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_21150-T1
Unique NameATCC64974_21150-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000003.1:3077979..3078904+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_21150-T1 ID=ATCC64974_21150-T1|Name=ATCC64974_21150-T1|organism=Aspergillus niger N402|type=mRNA|length=926bp|location=Sequence derived from alignment at OGUI01000003.1:3077979..3078904+ (Aspergillus niger N402)
ATGGCTTCCAAGGTAAGCCTTGTCGCTGCGCTTTCCAATTTCCGTCATTA
GCTTCCATGTGCCTCCTGTCAACCTCCCTTCCCGACCGACTTTCTCTCAT
GATCTCCGCACACTGCCTCACCCCGGAAAATGGACGATTCGCTCACCTCT
CGGTCGCATATAGTTCTTAAGAGAATACAAACTCGTCGTTGTCGGTGGTG
GTGGTGTCGGAAAGTCTTGCTTGACTATTCAATTGATCCAGAGCCACTTC
GTGGATGAATATGACCCGACAATTGAAGGTGGGCGCTGAGCTCTACTGTA
GCTTTCCCGACCGTGTGGCTCATGTTTCGATCGTGTTTATACAGATTCCT
ACCGCAAGCAGTGCGTTATCGACGAGGAGGTGGCATTGTTGGACGTTTTA
GATACTGCCGGACAGGAGGAGTACTCGGCGATGCGTGAACAGTACATGCG
AACCGGCGAAGGCTTCCTTCTCGTCTACTCGATAACGTCGCGCCAATCAT
TCGAGGAAATCATGACTTTCCAACAACAGATCCTGCGAGTCAAGGATAAG
GACTACTTTCCCATCATCGTGGTCGGCAACAAGTGCGATTTAGAAAAGGA
GAGGGCTGTTTCCGAAGAAGGTGGGTTTCCCGGCCCAGCATCTGCTTGCC
GGGGGAGGATGTGGCTGACGGTTCTTTCTTTACTTTACAGAGGGTGAGGC
TCTAGCACGGCAGTTCGGCTGCAAGTTCATCGAGACATCCGCCAAGTCCC
GTATTAACGTCGAGAACGCTTTCTACGACCTCGTGCGCGAGATCCGTCGG
TTCAACAAAGAGATGTCATCGTACCCGTCTGGCGCGGGCGGCGGCTCACG
CGCCCCGGAAGGAAAAATGGACGTCAGCGAGCCTGGCGATGACGCCGGCT
GCTGTGGAAAATGTATAATTATGTAA
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Coding sequence (CDS) from alignment at OGUI01000003.1:3077979..3078904+

>ATCC64974_21150-T1 ID=ATCC64974_21150-T1|Name=ATCC64974_21150-T1|organism=Aspergillus niger N402|type=CDS|length=2556bp|location=Sequence derived from alignment at OGUI01000003.1:3077979..3078904+ (Aspergillus niger N402)
ATGGCTTCCAAGTTCTTAAGAGAATACAAACTCGTCGTTGTCGGTGGTGG
TGGTGTCGGAAAGTCTTGCTTGACTATTCAATTGATCCAGAGCCACTTCG
TGGATGAATATGACCCGACAATTGAAGATTCCTACCGCAAGCAGTGCGTT
ATCGACGAGGAGGTGGCATTGTTGGACGTTTTAGATACTGCCGGACAGGA
GGAGTACTCGGCGATGCGTGAACAGTACATGCGAACCGGCGAAGGCTTCC
TTCTCGTCTACTCGATAACGTCGCGCCAATCATTCGAGGAAATCATGACT
TTCCAACAACAGATCCTGCGAGTCAAGGATAAGGACTACTTTCCCATCAT
CGTGGTCGGCAACAAGTGCGATTTAGAAAAGGAGAGGGCTGTTTCCGAAG
AAGAGGGTGAGGCTCTAGCACGGCAGTTCGGCTGCAAGTTCATCGAGACA
TCCGCCAAGTCCCGTATTAACGTCGAGAACGCTTTCTACGACCTCGTGCG
CGAGATCCGTCGGTTCAACAAAGAGATGTCATCGTACCCGTCTGGCGCGG
GCGGCGGCTCACGCGCCCCGGAAGGAAAAATGGACGTCAGCGAGCCTGGC
GATGACGCCGGCTGCTGTGGAAAATGTATAATTATGTAAATGGCTTCCAA
GTTCTTAAGAGAATACAAACTCGTCGTTGTCGGTGGTGGTGGTGTCGGAA
AGTCTTGCTTGACTATTCAATTGATCCAGAGCCACTTCGTGGATGAATAT
GACCCGACAATTGAAGATTCCTACCGCAAGCAGTGCGTTATCGACGAGGA
GGTGGCATTGTTGGACGTTTTAGATACTGCCGGACAGGAGGAGTACTCGG
CGATGCGTGAACAGTACATGCGAACCGGCGAAGGCTTCCTTCTCGTCTAC
TCGATAACGTCGCGCCAATCATTCGAGGAAATCATGACTTTCCAACAACA
GATCCTGCGAGTCAAGGATAAGGACTACTTTCCCATCATCGTGGTCGGCA
ACAAGTGCGATTTAGAAAAGGAGAGGGCTGTTTCCGAAGAAGAGGGTGAG
GCTCTAGCACGGCAGTTCGGCTGCAAGTTCATCGAGACATCCGCCAAGTC
CCGTATTAACGTCGAGAACGCTTTCTACGACCTCGTGCGCGAGATCCGTC
GGTTCAACAAAGAGATGTCATCGTACCCGTCTGGCGCGGGCGGCGGCTCA
CGCGCCCCGGAAGGAAAAATGGACGTCAGCGAGCCTGGCGATGACGCCGG
CTGCTGTGGAAAATGTATAATTATGTAAATGGCTTCCAAGTTCTTAAGAG
AATACAAACTCGTCGTTGTCGGTGGTGGTGGTGTCGGAAAGTCTTGCTTG
ACTATTCAATTGATCCAGAGCCACTTCGTGGATGAATATGACCCGACAAT
TGAAGATTCCTACCGCAAGCAGTGCGTTATCGACGAGGAGGTGGCATTGT
TGGACGTTTTAGATACTGCCGGACAGGAGGAGTACTCGGCGATGCGTGAA
CAGTACATGCGAACCGGCGAAGGCTTCCTTCTCGTCTACTCGATAACGTC
GCGCCAATCATTCGAGGAAATCATGACTTTCCAACAACAGATCCTGCGAG
TCAAGGATAAGGACTACTTTCCCATCATCGTGGTCGGCAACAAGTGCGAT
TTAGAAAAGGAGAGGGCTGTTTCCGAAGAAGAGGGTGAGGCTCTAGCACG
GCAGTTCGGCTGCAAGTTCATCGAGACATCCGCCAAGTCCCGTATTAACG
TCGAGAACGCTTTCTACGACCTCGTGCGCGAGATCCGTCGGTTCAACAAA
GAGATGTCATCGTACCCGTCTGGCGCGGGCGGCGGCTCACGCGCCCCGGA
AGGAAAAATGGACGTCAGCGAGCCTGGCGATGACGCCGGCTGCTGTGGAA
AATGTATAATTATGTAAATGGCTTCCAAGTTCTTAAGAGAATACAAACTC
GTCGTTGTCGGTGGTGGTGGTGTCGGAAAGTCTTGCTTGACTATTCAATT
GATCCAGAGCCACTTCGTGGATGAATATGACCCGACAATTGAAGATTCCT
ACCGCAAGCAGTGCGTTATCGACGAGGAGGTGGCATTGTTGGACGTTTTA
GATACTGCCGGACAGGAGGAGTACTCGGCGATGCGTGAACAGTACATGCG
AACCGGCGAAGGCTTCCTTCTCGTCTACTCGATAACGTCGCGCCAATCAT
TCGAGGAAATCATGACTTTCCAACAACAGATCCTGCGAGTCAAGGATAAG
GACTACTTTCCCATCATCGTGGTCGGCAACAAGTGCGATTTAGAAAAGGA
GAGGGCTGTTTCCGAAGAAGAGGGTGAGGCTCTAGCACGGCAGTTCGGCT
GCAAGTTCATCGAGACATCCGCCAAGTCCCGTATTAACGTCGAGAACGCT
TTCTACGACCTCGTGCGCGAGATCCGTCGGTTCAACAAAGAGATGTCATC
GTACCCGTCTGGCGCGGGCGGCGGCTCACGCGCCCCGGAAGGAAAAATGG
ACGTCAGCGAGCCTGGCGATGACGCCGGCTGCTGTGGAAAATGTATAATT
ATGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0007165signal transduction
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0003924GTPase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_21150ATCC64974_21150Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_21150-T1.exon1ATCC64974_21150-T1.exon1Aspergillus niger N402exon
ATCC64974_21150-T1.exon2ATCC64974_21150-T1.exon2Aspergillus niger N402exon
ATCC64974_21150-T1.exon3ATCC64974_21150-T1.exon3Aspergillus niger N402exon
ATCC64974_21150-T1.exon4ATCC64974_21150-T1.exon4Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_21150-T1.cdsATCC64974_21150-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_21150-T1ATCC64974_21150-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR020849
DBxrefInterPro:IPR005225
DBxrefInterPro:IPR001806
DBxrefPFAM:PF08477
DBxrefPFAM:PF00071
DBxrefPFAM:PF00025
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000003.1supercontigOGUI01000003.1:3077979..3078904 +
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