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ATCC64974_21170-T1, ATCC64974_21170-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_21170-T1
Unique NameATCC64974_21170-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000003.1:3081687..3082405+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_21170-T1 ID=ATCC64974_21170-T1|Name=ATCC64974_21170-T1|organism=Aspergillus niger N402|type=mRNA|length=719bp|location=Sequence derived from alignment at OGUI01000003.1:3081687..3082405+ (Aspergillus niger N402)
ATGGTAAGTGGACATTGCCCCGCATCGCGCTCCCGCTCCCTTTCCCCCCT
GCTAACCTGGAGCCTCCGTCCATGCAGTCCGAATCACGACTATATTCCTT
TTCCCCCGAGACCAAAGAAAAGCTTCGCAAGTTCCGCTTGGGAACCTCCC
GCGCTAAGGATCCGCAGGCCATCATTTGTAGGATCCCGTCTCCTGTCGTT
GCTACATAACCCCGCTCTCTTATCCTCTATCTATCACGAGCACAACCGTC
ACAGCTATCGCGCGAACTTGTTCGCTTCACATCGGATATCTCAGAACAAT
GGGTCGTTGACAACAGGGTTGGCAGATATCATCGATAGTAAGAGCCAGGA
GATCAGACCTGAAGATGGCGAGGTTTACTCCAAGATGGAGGATCTAGCCG
ACGAGCTGCCCGAGTCGTCCCCTCGGTTTATCCTCCTTAGCTATCCCCTT
ACCCTCGTGAGTATTTCGACAAGCCTTGTTTCATCTAGACTTAGCGAGGA
AGACCTAACTTGTGTTTGTTGTATTAGGCTTCCGGCCGTCTCACCGTTCC
TTACGTCATGCTCTACTACCTCCCCGTGAACTGCAACCCGAATTCGCGCA
TGATGTATGCGGGTGCTGTCGAGTTGATGCGCAATACGGCGGAGGTTAAT
CGGGTGATTGAGGTGCATGAGGAAGATGATATTATCTCGATCGAGTCGAA
GCTGCAAAACGCAGATTAG
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Coding sequence (CDS) from alignment at OGUI01000003.1:3081687..3082405+

>ATCC64974_21170-T1 ID=ATCC64974_21170-T1|Name=ATCC64974_21170-T1|organism=Aspergillus niger N402|type=CDS|length=1704bp|location=Sequence derived from alignment at OGUI01000003.1:3081687..3082405+ (Aspergillus niger N402)
ATGTCCGAATCACGACTATATTCCTTTTCCCCCGAGACCAAAGAAAAGCT
TCGCAAGTTCCGCTTGGGAACCTCCCGCGCTAAGGATCCGCAGGCCATCA
TTTATATCATCGATAGTAAGAGCCAGGAGATCAGACCTGAAGATGGCGAG
GTTTACTCCAAGATGGAGGATCTAGCCGACGAGCTGCCCGAGTCGTCCCC
TCGGTTTATCCTCCTTAGCTATCCCCTTACCCTCGCTTCCGGCCGTCTCA
CCGTTCCTTACGTCATGCTCTACTACCTCCCCGTGAACTGCAACCCGAAT
TCGCGCATGATGTATGCGGGTGCTGTCGAGTTGATGCGCAATACGGCGGA
GGTTAATCGGGTGATTGAGGTGCATGAGGAAGATGATATTATCTCGATCG
AGTCGAAGCTGCAAAACGCAGATTAGATGTCCGAATCACGACTATATTCC
TTTTCCCCCGAGACCAAAGAAAAGCTTCGCAAGTTCCGCTTGGGAACCTC
CCGCGCTAAGGATCCGCAGGCCATCATTTATATCATCGATAGTAAGAGCC
AGGAGATCAGACCTGAAGATGGCGAGGTTTACTCCAAGATGGAGGATCTA
GCCGACGAGCTGCCCGAGTCGTCCCCTCGGTTTATCCTCCTTAGCTATCC
CCTTACCCTCGCTTCCGGCCGTCTCACCGTTCCTTACGTCATGCTCTACT
ACCTCCCCGTGAACTGCAACCCGAATTCGCGCATGATGTATGCGGGTGCT
GTCGAGTTGATGCGCAATACGGCGGAGGTTAATCGGGTGATTGAGGTGCA
TGAGGAAGATGATATTATCTCGATCGAGTCGAAGCTGCAAAACGCAGATT
AGATGTCCGAATCACGACTATATTCCTTTTCCCCCGAGACCAAAGAAAAG
CTTCGCAAGTTCCGCTTGGGAACCTCCCGCGCTAAGGATCCGCAGGCCAT
CATTTATATCATCGATAGTAAGAGCCAGGAGATCAGACCTGAAGATGGCG
AGGTTTACTCCAAGATGGAGGATCTAGCCGACGAGCTGCCCGAGTCGTCC
CCTCGGTTTATCCTCCTTAGCTATCCCCTTACCCTCGCTTCCGGCCGTCT
CACCGTTCCTTACGTCATGCTCTACTACCTCCCCGTGAACTGCAACCCGA
ATTCGCGCATGATGTATGCGGGTGCTGTCGAGTTGATGCGCAATACGGCG
GAGGTTAATCGGGTGATTGAGGTGCATGAGGAAGATGATATTATCTCGAT
CGAGTCGAAGCTGCAAAACGCAGATTAGATGTCCGAATCACGACTATATT
CCTTTTCCCCCGAGACCAAAGAAAAGCTTCGCAAGTTCCGCTTGGGAACC
TCCCGCGCTAAGGATCCGCAGGCCATCATTTATATCATCGATAGTAAGAG
CCAGGAGATCAGACCTGAAGATGGCGAGGTTTACTCCAAGATGGAGGATC
TAGCCGACGAGCTGCCCGAGTCGTCCCCTCGGTTTATCCTCCTTAGCTAT
CCCCTTACCCTCGCTTCCGGCCGTCTCACCGTTCCTTACGTCATGCTCTA
CTACCTCCCCGTGAACTGCAACCCGAATTCGCGCATGATGTATGCGGGTG
CTGTCGAGTTGATGCGCAATACGGCGGAGGTTAATCGGGTGATTGAGGTG
CATGAGGAAGATGATATTATCTCGATCGAGTCGAAGCTGCAAAACGCAGA
TTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0034316negative regulation of Arp2/3 complex-mediated actin nucleation
Vocabulary: Molecular Function
TermDefinition
GO:0071933Arp2/3 complex binding
GO:0003779actin binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_21170ATCC64974_21170Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_21170-T1.exon1ATCC64974_21170-T1.exon1Aspergillus niger N402exon
ATCC64974_21170-T1.exon2ATCC64974_21170-T1.exon2Aspergillus niger N402exon
ATCC64974_21170-T1.exon3ATCC64974_21170-T1.exon3Aspergillus niger N402exon
ATCC64974_21170-T1.exon4ATCC64974_21170-T1.exon4Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_21170-T1.cdsATCC64974_21170-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_21170-T1ATCC64974_21170-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
NoteBUSCO:EOG09265I60
DBxrefInterPro:IPR029006
DBxrefInterPro:IPR011171
DBxrefInterPro:IPR002108
DBxrefPFAM:PF00241
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000003.1supercontigOGUI01000003.1:3081687..3082405 +
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