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ATCC64974_21220-T1, ATCC64974_21220-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_21220-T1
Unique NameATCC64974_21220-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000003.1:3103580..3104373+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_21220-T1 ID=ATCC64974_21220-T1|Name=ATCC64974_21220-T1|organism=Aspergillus niger N402|type=mRNA|length=794bp|location=Sequence derived from alignment at OGUI01000003.1:3103580..3104373+ (Aspergillus niger N402)
ATGACAACCCCCAAACCCCACATCGCACACACGCTCCTCTCGCGCGCGCA
CTCCCCCGACACAGCCTCGCAACTCTTCACCGAGCGCATAAAACAAAAGC
CTCTCTACGTGCGTCCCACGTCCCCAACGCCCGCCGACAACCGCTCGCGC
CGGCGCCTCCATCGCCTCCGCAAGAAAGAGTATTTCCTCCGCAAACAAAA
GCCGCAGCCTTTATCCGCGCGTCAGAAGCGCGCCTCGGGCCTCTACAACC
TCCCCAAGGAAGAATGCAAGTATGCGGTTTTCCAGGAGCTGCATGCCATG
TGGGTGCGGTATATGCAGGATATGCTAGACTTGGGGGCAAAGAAATTCAA
GCCGCCGATGACACCGTTGTCGCATGGGAGTAAGCTCTCCAGTGCGGATT
TTCATGGCGCGGAGGTGGAGGTTGTAAGGAGTCGGTGTGAGGGGAGGGTC
GGGGTTAAGGGGATTGTGGTTAGGGATACGAAGTTTACGTTTGTGGTTGT
TACGAGGGGGGATGAGGTTAAGAGTATGTTTTATTCTTTTTCTTGATGAG
GTTTGGTTTGTGTGTTGCTAATGTGGGTGTGAATCTAGCTATTCCGAAGG
AGCAGACTATTTTCCGGTTTAGTGTGCCTTTGCCTGAGGCGGATGATGCT
GATGGCGCGGCGGTGACTGGGGAGACGAGCGCTGATTCTGCTAAGAAGGA
GCTCGTGTTTGAGCTCCATGGCAGTCAGTTCCAGAATCGTCCGGTTGACA
GGGCGAACAAGAAATTCAAATGGCGGAATGTGGATTATATCTAA
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Coding sequence (CDS) from alignment at OGUI01000003.1:3103580..3104373+

>ATCC64974_21220-T1 ID=ATCC64974_21220-T1|Name=ATCC64974_21220-T1|organism=Aspergillus niger N402|type=CDS|length=1458bp|location=Sequence derived from alignment at OGUI01000003.1:3103580..3104373+ (Aspergillus niger N402)
ATGACAACCCCCAAACCCCACATCGCACACACGCTCCTCTCGCGCGCGCA
CTCCCCCGACACAGCCTCGCAACTCTTCACCGAGCGCATAAAACAAAAGC
CTCTCTACGTGCGTCCCACGTCCCCAACGCCCGCCGACAACCGCTCGCGC
CGGCGCCTCCATCGCCTCCGCAAGAAAGAGTATTTCCTCCGCAAACAAAA
GCCGCAGCCTTTATCCGCGCGTCAGAAGCGCGCCTCGGGCCTCTACAACC
TCCCCAAGGAAGAATGCAAGTATGCGGTTTTCCAGGAGCTGCATGCCATG
TGGGTGCGGTATATGCAGGATATGCTAGACTTGGGGGCAAAGAAATTCAA
GCCGCCGATGACACCGTTGTCGCATGGGAGTAAGCTCTCCAGTGCGGATT
TTCATGGCGCGGAGGTGGAGGTTGTAAGGAGTCGGTGTGAGGGGAGGGTC
GGGGTTAAGGGGATTGTGGTTAGGGATACGAAGTTTACGTTTGTGGTTGT
TACGAGGGGGGATGAGGTTAAGACTATTCCGAAGGAGCAGACTATTTTCC
GGTTTAGTGTGCCTTTGCCTGAGGCGGATGATGCTGATGGCGCGGCGGTG
ACTGGGGAGACGAGCGCTGATTCTGCTAAGAAGGAGCTCGTGTTTGAGCT
CCATGGCAGTCAGTTCCAGAATCGTCCGGTTGACAGGGCGAACAAGAAAT
TCAAATGGCGGAATGTGGATTATATCTAAATGACAACCCCCAAACCCCAC
ATCGCACACACGCTCCTCTCGCGCGCGCACTCCCCCGACACAGCCTCGCA
ACTCTTCACCGAGCGCATAAAACAAAAGCCTCTCTACGTGCGTCCCACGT
CCCCAACGCCCGCCGACAACCGCTCGCGCCGGCGCCTCCATCGCCTCCGC
AAGAAAGAGTATTTCCTCCGCAAACAAAAGCCGCAGCCTTTATCCGCGCG
TCAGAAGCGCGCCTCGGGCCTCTACAACCTCCCCAAGGAAGAATGCAAGT
ATGCGGTTTTCCAGGAGCTGCATGCCATGTGGGTGCGGTATATGCAGGAT
ATGCTAGACTTGGGGGCAAAGAAATTCAAGCCGCCGATGACACCGTTGTC
GCATGGGAGTAAGCTCTCCAGTGCGGATTTTCATGGCGCGGAGGTGGAGG
TTGTAAGGAGTCGGTGTGAGGGGAGGGTCGGGGTTAAGGGGATTGTGGTT
AGGGATACGAAGTTTACGTTTGTGGTTGTTACGAGGGGGGATGAGGTTAA
GACTATTCCGAAGGAGCAGACTATTTTCCGGTTTAGTGTGCCTTTGCCTG
AGGCGGATGATGCTGATGGCGCGGCGGTGACTGGGGAGACGAGCGCTGAT
TCTGCTAAGAAGGAGCTCGTGTTTGAGCTCCATGGCAGTCAGTTCCAGAA
TCGTCCGGTTGACAGGGCGAACAAGAAATTCAAATGGCGGAATGTGGATT
ATATCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0030677ribonuclease P complex
Vocabulary: Biological Process
TermDefinition
GO:0001682tRNA 5'-leader removal
GO:0008033tRNA processing
GO:0006396RNA processing
Vocabulary: Molecular Function
TermDefinition
GO:0004526ribonuclease P activity
GO:0004540ribonuclease activity
GO:0003723RNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_21220ATCC64974_21220Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_21220-T1.exon1ATCC64974_21220-T1.exon1Aspergillus niger N402exon
ATCC64974_21220-T1.exon2ATCC64974_21220-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_21220-T1.cdsATCC64974_21220-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_21220-T1ATCC64974_21220-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteBUSCO:EOG092644N1
DBxrefInterPro:IPR023534
DBxrefInterPro:IPR023538
DBxrefInterPro:IPR036980
DBxrefInterPro:IPR016848
DBxrefInterPro:IPR002730
DBxrefPFAM:PF01868
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000003.1supercontigOGUI01000003.1:3103580..3104373 +
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