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ATCC64974_21230-T1, ATCC64974_21230-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_21230-T1
Unique NameATCC64974_21230-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000003.1:3105310..3106263-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_21230-T1 ID=ATCC64974_21230-T1|Name=ATCC64974_21230-T1|organism=Aspergillus niger N402|type=mRNA|length=954bp|location=Sequence derived from alignment at OGUI01000003.1:3105310..3106263- (Aspergillus niger N402)
ATGGATATCGAACCCACCCTTCCTATTCCGATCTCGTATATTGGGGGTAG
CTACTTTCTCTTCTCAATTGATGCAGTTACGTATGTGAGACGCGAGTATC
ACATTTGCGGCGTCTTAAGCGGCACATTGCCTCAAATCCCACAACAGAAT
GTCTTCCTGGGCTTGCCATTGAAGCTAATGCCGGAAGAGGCCCGGTTGCT
CGTGGAGAAAGGTGTAGCATGCATTGTAGACGAGGTAAAAGTCCAAAAGG
ACGGAATGCGAGCCCTCATGGAGGAGGATCGCAAGAAGTATCTCCGTGAG
CTAGAATCTCAAGGCCAGCATGCTATGCGACTACAGAACGACCGGAAGGA
GCAGCAACGCGAGAAGGCTTTAAAGAAAATAGAAGAAAAGAAGGCCGCAA
AGGCCAAAAAGTCTGCTGAAAGGCAGCAGGAGCAGCAGCCTGCCCCTCTT
AATAATGAGGCTGCTGCTCAAGACCCGGTTGTTGACTTGTTCGCAAATGA
CCAGGAGGGTACTGGCGAAATGTCGCGCCGTTCTTCGACTGCCACTGCTG
CTCCCTTTGGCACTGTCATGGGAGTCACGCCTGCTACATCTTATCCGCCT
CTTCCGTATGAGTGGTCTGCTGAGCAACAGCTACCGCTTCCTGATGTGCC
TTCCTCATACCCATTATTCGCTCACCTTCATTCCGAAGGATACTTCTTAT
CCCCTGGGTTGCGATTCGGGTGTCAGTATCTTGCCTATCCCGGTGATCCT
TTACGGTTCCATTCACACTTCCTGAGTGTGTCTGCTGACTGGGATGAGGA
GTTGGATTTGATGAGCATCGTTGCCGGTGGTCGACTAGGTACTGGTGTGA
AGAAGGGTTTCTTGATTGGAGGAGCTGAGAAGAAGATCGAGGGCTCGGAT
GCTGGAGACCCCAGTAGTGTGAGGACTTTCAGCATTGAATGGGGTGGAAT
GTGA
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Coding sequence (CDS) from alignment at OGUI01000003.1:3105310..3106263-

>ATCC64974_21230-T1 ID=ATCC64974_21230-T1|Name=ATCC64974_21230-T1|organism=Aspergillus niger N402|type=CDS|length=954bp|location=Sequence derived from alignment at OGUI01000003.1:3105310..3106263- (Aspergillus niger N402)
ATGGATATCGAACCCACCCTTCCTATTCCGATCTCGTATATTGGGGGTAG
CTACTTTCTCTTCTCAATTGATGCAGTTACGTATGTGAGACGCGAGTATC
ACATTTGCGGCGTCTTAAGCGGCACATTGCCTCAAATCCCACAACAGAAT
GTCTTCCTGGGCTTGCCATTGAAGCTAATGCCGGAAGAGGCCCGGTTGCT
CGTGGAGAAAGGTGTAGCATGCATTGTAGACGAGGTAAAAGTCCAAAAGG
ACGGAATGCGAGCCCTCATGGAGGAGGATCGCAAGAAGTATCTCCGTGAG
CTAGAATCTCAAGGCCAGCATGCTATGCGACTACAGAACGACCGGAAGGA
GCAGCAACGCGAGAAGGCTTTAAAGAAAATAGAAGAAAAGAAGGCCGCAA
AGGCCAAAAAGTCTGCTGAAAGGCAGCAGGAGCAGCAGCCTGCCCCTCTT
AATAATGAGGCTGCTGCTCAAGACCCGGTTGTTGACTTGTTCGCAAATGA
CCAGGAGGGTACTGGCGAAATGTCGCGCCGTTCTTCGACTGCCACTGCTG
CTCCCTTTGGCACTGTCATGGGAGTCACGCCTGCTACATCTTATCCGCCT
CTTCCGTATGAGTGGTCTGCTGAGCAACAGCTACCGCTTCCTGATGTGCC
TTCCTCATACCCATTATTCGCTCACCTTCATTCCGAAGGATACTTCTTAT
CCCCTGGGTTGCGATTCGGGTGTCAGTATCTTGCCTATCCCGGTGATCCT
TTACGGTTCCATTCACACTTCCTGAGTGTGTCTGCTGACTGGGATGAGGA
GTTGGATTTGATGAGCATCGTTGCCGGTGGTCGACTAGGTACTGGTGTGA
AGAAGGGTTTCTTGATTGGAGGAGCTGAGAAGAAGATCGAGGGCTCGGAT
GCTGGAGACCCCAGTAGTGTGAGGACTTTCAGCATTGAATGGGGTGGAAT
GTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0000214tRNA-intron endonuclease complex
Vocabulary: Biological Process
TermDefinition
GO:0006388tRNA splicing, via endonucleolytic cleavage and ligation
GO:0000379tRNA-type intron splice site recognition and cleavage
Vocabulary: Molecular Function
TermDefinition
GO:0000213tRNA-intron endonuclease activity
GO:0004518nuclease activity
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_21230ATCC64974_21230Aspergillus niger N402gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_21230-T1.cdsATCC64974_21230-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_21230-T1.exon1ATCC64974_21230-T1.exon1Aspergillus niger N402exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_21230-T1ATCC64974_21230-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09263U71
DBxrefInterPro:IPR036167
DBxrefInterPro:IPR006676
DBxrefInterPro:IPR006677
DBxrefInterPro:IPR016690
DBxrefInterPro:IPR011856
DBxrefPFAM:PF01974
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000003.1supercontigOGUI01000003.1:3105310..3106263 -
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