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ATCC64974_22090-T1, ATCC64974_22090-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_22090-T1
Unique NameATCC64974_22090-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000003.1:3340586..3342049+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_22090-T1 ID=ATCC64974_22090-T1|Name=ATCC64974_22090-T1|organism=Aspergillus niger N402|type=mRNA|length=1464bp|location=Sequence derived from alignment at OGUI01000003.1:3340586..3342049+ (Aspergillus niger N402)
ATGTTCCTGGTTTCCCTTGACACGACTATTATCTCAACCGCTATTCCTCA
GATCACAGACGAATTCAACTCCACTGCTGATGTTGGCTGGTATGGAGCTG
CATTTCTTCTGGGAAGCGCTGTAACTCAAGCACCATGGGGAAAACTATAC
GGATTTTTCGATATTAAATGGACCTACCTCCTCAGCCTACTCATGTTTGA
GTTGGGGTCTTTGCTTTGTGCTATTTCCCACAACTCCCCAACATTCATAA
TTGGCAGAGCAATTGCAGGAATAGGTGGATCAGGCATTGGGTCGGGGATA
TATACGGTCATTGGGGTCTGCGTCCCACCCAAAAAACGCCCTATACTGGT
TGGCGTCACGGGTCTGGCATTCTTGCTCGCCAGCTTTGCCGGCCCCGTTA
TCGGGGGAGAATTTACAAGCAACTTAACTTGGAGATGGTGCTTCTGGATC
AATGTACCTGTTGGCGGAGCTACTTTCGCTGTCCTCCTCCTCTTATTTCG
GCCACCCTTTCGACGCGCGAATGTAGGAGTATCACGGAAAGAGATCATCC
TCCAGCTCGATATACCGGGGGTCATTACATTAACAGGTGCATTACTCTGT
TTTCTACTCAGCCTTGAGTGGGGAGTGAGCAAGTCCTGGCATGATAGAGA
TGTGATTGGATGTCTGGTCGGTTTTCCAATCCTCACAGGGCTGTTCATCA
CGAATGAATTCTTCTGGGATGACCGGGCGATGATTCCACGTCGATTGCTT
CTCAAGAAAGAAGTTATTGTCAATCTCATTGTCATTTTTCTCCTGGCGGG
CGCGTTTTTCATGCTCCTATATTACATGCCCATCTACTTCCAGACAGTCA
AAGGTAACTCAGCCCAGGACTCAGGGATACGCACCCTGCCATTGATCGTG
TCAGCTGGCGTTATGGCAGTATTTGGAGCGATAGGGTTTGGTATCAGCGG
CTACCCGACACCGTTCTTGCTGTTTGGTGCGATGCTGATCAGTGTAGGAG
CCGGACTGCTGTACATGTTGGATCTTGTCACGCTGTCGAGTCACTGGATT
CCGTACCAGATTTTAGCAGGGCTTGGGATAGGAGCCGCACTTCAGGTACC
AATCATTATGAACCAGGCTACTGTCGATGCATCGGACATGTCAACCATGA
CATCTATAACCTTGTTCTTCAAATGTCTGGGGGCTTCGGTATTTATGCAG
ACAGGGCAGACCATATTCCTCGAGAAGGTGAAGCGGAATCTGGACATGAT
GACTGTTGCCGATGTGAACCCCAACCAAATACTCACCGGAGGCCTTGTGC
GTGTACAAGCCATCGATTCGGCCTCAAGTATAGCACTCCGCACTGCGTAC
CTTGGAGGTCTGAAAGATGTATTCTTGTTGGTAGCAGCACTCTCGGGCCT
TGCCGCTCTGCTTGCGTCACTTATGGGTCGATATAAGATGGATACTGCAC
GACTGCGGCTATGA
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Coding sequence (CDS) from alignment at OGUI01000003.1:3340586..3342049+

>ATCC64974_22090-T1 ID=ATCC64974_22090-T1|Name=ATCC64974_22090-T1|organism=Aspergillus niger N402|type=CDS|length=1464bp|location=Sequence derived from alignment at OGUI01000003.1:3340586..3342049+ (Aspergillus niger N402)
ATGTTCCTGGTTTCCCTTGACACGACTATTATCTCAACCGCTATTCCTCA
GATCACAGACGAATTCAACTCCACTGCTGATGTTGGCTGGTATGGAGCTG
CATTTCTTCTGGGAAGCGCTGTAACTCAAGCACCATGGGGAAAACTATAC
GGATTTTTCGATATTAAATGGACCTACCTCCTCAGCCTACTCATGTTTGA
GTTGGGGTCTTTGCTTTGTGCTATTTCCCACAACTCCCCAACATTCATAA
TTGGCAGAGCAATTGCAGGAATAGGTGGATCAGGCATTGGGTCGGGGATA
TATACGGTCATTGGGGTCTGCGTCCCACCCAAAAAACGCCCTATACTGGT
TGGCGTCACGGGTCTGGCATTCTTGCTCGCCAGCTTTGCCGGCCCCGTTA
TCGGGGGAGAATTTACAAGCAACTTAACTTGGAGATGGTGCTTCTGGATC
AATGTACCTGTTGGCGGAGCTACTTTCGCTGTCCTCCTCCTCTTATTTCG
GCCACCCTTTCGACGCGCGAATGTAGGAGTATCACGGAAAGAGATCATCC
TCCAGCTCGATATACCGGGGGTCATTACATTAACAGGTGCATTACTCTGT
TTTCTACTCAGCCTTGAGTGGGGAGTGAGCAAGTCCTGGCATGATAGAGA
TGTGATTGGATGTCTGGTCGGTTTTCCAATCCTCACAGGGCTGTTCATCA
CGAATGAATTCTTCTGGGATGACCGGGCGATGATTCCACGTCGATTGCTT
CTCAAGAAAGAAGTTATTGTCAATCTCATTGTCATTTTTCTCCTGGCGGG
CGCGTTTTTCATGCTCCTATATTACATGCCCATCTACTTCCAGACAGTCA
AAGGTAACTCAGCCCAGGACTCAGGGATACGCACCCTGCCATTGATCGTG
TCAGCTGGCGTTATGGCAGTATTTGGAGCGATAGGGTTTGGTATCAGCGG
CTACCCGACACCGTTCTTGCTGTTTGGTGCGATGCTGATCAGTGTAGGAG
CCGGACTGCTGTACATGTTGGATCTTGTCACGCTGTCGAGTCACTGGATT
CCGTACCAGATTTTAGCAGGGCTTGGGATAGGAGCCGCACTTCAGGTACC
AATCATTATGAACCAGGCTACTGTCGATGCATCGGACATGTCAACCATGA
CATCTATAACCTTGTTCTTCAAATGTCTGGGGGCTTCGGTATTTATGCAG
ACAGGGCAGACCATATTCCTCGAGAAGGTGAAGCGGAATCTGGACATGAT
GACTGTTGCCGATGTGAACCCCAACCAAATACTCACCGGAGGCCTTGTGC
GTGTACAAGCCATCGATTCGGCCTCAAGTATAGCACTCCGCACTGCGTAC
CTTGGAGGTCTGAAAGATGTATTCTTGTTGGTAGCAGCACTCTCGGGCCT
TGCCGCTCTGCTTGCGTCACTTATGGGTCGATATAAGATGGATACTGCAC
GACTGCGGCTATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005887integral component of plasma membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_22090ATCC64974_22090Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_22090-T1.exon1ATCC64974_22090-T1.exon1Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_22090-T1.cdsATCC64974_22090-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_22090-T1ATCC64974_22090-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_10000031.8
NoteSMCOG1005: EmrB/QacA
NoteSMCOG1005:Drug resistance transporter
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000003.1supercontigOGUI01000003.1:3340586..3342049 +
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