You are here

Home

ATCC64974_22310-T1, ATCC64974_22310-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_22310-T1
Unique NameATCC64974_22310-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000003.1:3412103..3413366-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_22310-T1 ID=ATCC64974_22310-T1|Name=ATCC64974_22310-T1|organism=Aspergillus niger N402|type=mRNA|length=1264bp|location=Sequence derived from alignment at OGUI01000003.1:3412103..3413366- (Aspergillus niger N402)
ATGGCACAGCTAGATCTGCCCCAATCCGAGAATACCGTTGAGGTGTTCCT
CATCGATTCGTATGTCTTTTCCTAACAGCTGCAGCTTCCTTGCTACCCAT
TAGCTAATACAATGGCGCACCAGGCAAGCCCGTCTAGATTTCCCAGCTCA
GCAATTCATGCAACCTTATATCAAAGGCTACGATCGCATGAAAGTGCCTT
CCTACAGTTTTCTCATCACACACCCATCGGGCCAACGCGTGTTGTTCGAT
CTATCGATCCGATCCGACTTTCACAATCTCGCGCCCGAGTTTGCGGAGCG
CTGCACGAACACAAAAGACAGCGGATGGAAAATCCACGCGCCGTACAGCG
TCTCTGAAGTACTAGTCAAAAACGGTGTGCCTTTGGAGGAAATCAACGCC
ATCATCTGGTCGCACTTCCATTTCGACCACACCGGTGATCCGGCTTTATT
CCCTAGCTCCACCGATCTCGTCGTGGGACCTGGCTTCATCCGCAACTTCG
CACCTGGATGGCCTGCGCGAGCGGATGCCCCAGTACGGTCCAGTGATTGG
GAAGGGCGGAAACTTCGAGAAGTCAATTTCAACGATGGTGGCGACAAACA
GTTGATGATCGGGCAGTTCCCTGCAATCGACTGGTTTGGTGATGGAAGTT
TCTATTTGCTTCATACCCCAGGCCACACCCCAGACCACCTTGTGGGTTTT
GCTCGAGTGCAGGCGGATTCTTTTGTTCTCATGGGAGCGGTATGTGCTCA
CTTTATTCTTTTCTCTTTCCTCAGAAAAAGGCAGAGAAACAAACAATACA
GCAAATTGCTAACATGCGACGTTTGGAAACAGGATTTTGCCCACCATCCC
GGCGAGTTCAGACCATCTAAGCTCACACCCATCCCACGAAGCATTCAGCC
GTCTCCGCTACCTTCTCATCCTCGATATAGGAGTATCTGCCCAGGTCATA
TCTTTGGCCCCATAGGGCACTACCCCGGGACAAATGATCGTCCTTTCTTC
GAGCCCGCGAAACTGTACACCCATGATTTCGACCAGTGCCTTCGCACAAT
TGAGGGACTAACCGAGTTTGATGCAGATCAACGGGTTTGGGTCCTGACGG
CTCACGACAATAGCCTTTTGCCCATCTTCACTGGCGAAGAGGACAAAGAT
GCTGGATGGTTCTTCCCGCACCGTACCCTCAATGGGTGGCGGCAGGCGGG
TCTAGCGGAGAGAGGGATGTGGCGATTCCTGAGTGATTTCAAAAACGCCA
TCAAGGAAGAGTGA
back to top

Coding sequence (CDS) from alignment at OGUI01000003.1:3412103..3413366-

>ATCC64974_22310-T1 ID=ATCC64974_22310-T1|Name=ATCC64974_22310-T1|organism=Aspergillus niger N402|type=CDS|length=3321bp|location=Sequence derived from alignment at OGUI01000003.1:3412103..3413366- (Aspergillus niger N402)
GATTTTGCCCACCATCCCGGCGAGTTCAGACCATCTAAGCTCACACCCAT
CCCACGAAGCATTCAGCCGTCTCCGCTACCTTCTCATCCTCGATATAGGA
GTATCTGCCCAGGTCATATCTTTGGCCCCATAGGGCACTACCCCGGGACA
AATGATCGTCCTTTCTTCGAGCCCGCGAAACTGTACACCCATGATTTCGA
CCAGTGCCTTCGCACAATTGAGGGACTAACCGAGTTTGATGCAGATCAAC
GGGTTTGGGTCCTGACGGCTCACGACAATAGCCTTTTGCCCATCTTCACT
GGCGAAGAGGACAAAGATGCTGGATGGTTCTTCCCGCACCGTACCCTCAA
TGGGTGGCGGCAGGCGGGTCTAGCGGAGAGAGGGATGTGGCGATTCCTGA
GTGATTTCAAAAACGCCATCAAGGAAGAGTGAGCAAGCCCGTCTAGATTT
CCCAGCTCAGCAATTCATGCAACCTTATATCAAAGGCTACGATCGCATGA
AAGTGCCTTCCTACAGTTTTCTCATCACACACCCATCGGGCCAACGCGTG
TTGTTCGATCTATCGATCCGATCCGACTTTCACAATCTCGCGCCCGAGTT
TGCGGAGCGCTGCACGAACACAAAAGACAGCGGATGGAAAATCCACGCGC
CGTACAGCGTCTCTGAAGTACTAGTCAAAAACGGTGTGCCTTTGGAGGAA
ATCAACGCCATCATCTGGTCGCACTTCCATTTCGACCACACCGGTGATCC
GGCTTTATTCCCTAGCTCCACCGATCTCGTCGTGGGACCTGGCTTCATCC
GCAACTTCGCACCTGGATGGCCTGCGCGAGCGGATGCCCCAGTACGGTCC
AGTGATTGGGAAGGGCGGAAACTTCGAGAAGTCAATTTCAACGATGGTGG
CGACAAACAGTTGATGATCGGGCAGTTCCCTGCAATCGACTGGTTTGGTG
ATGGAAGTTTCTATTTGCTTCATACCCCAGGCCACACCCCAGACCACCTT
GTGGGTTTTGCTCGAGTGCAGGCGGATTCTTTTGTTCTCATGGGAGCGAT
GGCACAGCTAGATCTGCCCCAATCCGAGAATACCGTTGAGGTGTTCCTCA
TCGATTCGATTTTGCCCACCATCCCGGCGAGTTCAGACCATCTAAGCTCA
CACCCATCCCACGAAGCATTCAGCCGTCTCCGCTACCTTCTCATCCTCGA
TATAGGAGTATCTGCCCAGGTCATATCTTTGGCCCCATAGGGCACTACCC
CGGGACAAATGATCGTCCTTTCTTCGAGCCCGCGAAACTGTACACCCATG
ATTTCGACCAGTGCCTTCGCACAATTGAGGGACTAACCGAGTTTGATGCA
GATCAACGGGTTTGGGTCCTGACGGCTCACGACAATAGCCTTTTGCCCAT
CTTCACTGGCGAAGAGGACAAAGATGCTGGATGGTTCTTCCCGCACCGTA
CCCTCAATGGGTGGCGGCAGGCGGGTCTAGCGGAGAGAGGGATGTGGCGA
TTCCTGAGTGATTTCAAAAACGCCATCAAGGAAGAGTGAGCAAGCCCGTC
TAGATTTCCCAGCTCAGCAATTCATGCAACCTTATATCAAAGGCTACGAT
CGCATGAAAGTGCCTTCCTACAGTTTTCTCATCACACACCCATCGGGCCA
ACGCGTGTTGTTCGATCTATCGATCCGATCCGACTTTCACAATCTCGCGC
CCGAGTTTGCGGAGCGCTGCACGAACACAAAAGACAGCGGATGGAAAATC
CACGCGCCGTACAGCGTCTCTGAAGTACTAGTCAAAAACGGTGTGCCTTT
GGAGGAAATCAACGCCATCATCTGGTCGCACTTCCATTTCGACCACACCG
GTGATCCGGCTTTATTCCCTAGCTCCACCGATCTCGTCGTGGGACCTGGC
TTCATCCGCAACTTCGCACCTGGATGGCCTGCGCGAGCGGATGCCCCAGT
ACGGTCCAGTGATTGGGAAGGGCGGAAACTTCGAGAAGTCAATTTCAACG
ATGGTGGCGACAAACAGTTGATGATCGGGCAGTTCCCTGCAATCGACTGG
TTTGGTGATGGAAGTTTCTATTTGCTTCATACCCCAGGCCACACCCCAGA
CCACCTTGTGGGTTTTGCTCGAGTGCAGGCGGATTCTTTTGTTCTCATGG
GAGCGATGGCACAGCTAGATCTGCCCCAATCCGAGAATACCGTTGAGGTG
TTCCTCATCGATTCGATTTTGCCCACCATCCCGGCGAGTTCAGACCATCT
AAGCTCACACCCATCCCACGAAGCATTCAGCCGTCTCCGCTACCTTCTCA
TCCTCGATATAGGAGTATCTGCCCAGGTCATATCTTTGGCCCCATAGGGC
ACTACCCCGGGACAAATGATCGTCCTTTCTTCGAGCCCGCGAAACTGTAC
ACCCATGATTTCGACCAGTGCCTTCGCACAATTGAGGGACTAACCGAGTT
TGATGCAGATCAACGGGTTTGGGTCCTGACGGCTCACGACAATAGCCTTT
TGCCCATCTTCACTGGCGAAGAGGACAAAGATGCTGGATGGTTCTTCCCG
CACCGTACCCTCAATGGGTGGCGGCAGGCGGGTCTAGCGGAGAGAGGGAT
GTGGCGATTCCTGAGTGATTTCAAAAACGCCATCAAGGAAGAGTGAGCAA
GCCCGTCTAGATTTCCCAGCTCAGCAATTCATGCAACCTTATATCAAAGG
CTACGATCGCATGAAAGTGCCTTCCTACAGTTTTCTCATCACACACCCAT
CGGGCCAACGCGTGTTGTTCGATCTATCGATCCGATCCGACTTTCACAAT
CTCGCGCCCGAGTTTGCGGAGCGCTGCACGAACACAAAAGACAGCGGATG
GAAAATCCACGCGCCGTACAGCGTCTCTGAAGTACTAGTCAAAAACGGTG
TGCCTTTGGAGGAAATCAACGCCATCATCTGGTCGCACTTCCATTTCGAC
CACACCGGTGATCCGGCTTTATTCCCTAGCTCCACCGATCTCGTCGTGGG
ACCTGGCTTCATCCGCAACTTCGCACCTGGATGGCCTGCGCGAGCGGATG
CCCCAGTACGGTCCAGTGATTGGGAAGGGCGGAAACTTCGAGAAGTCAAT
TTCAACGATGGTGGCGACAAACAGTTGATGATCGGGCAGTTCCCTGCAAT
CGACTGGTTTGGTGATGGAAGTTTCTATTTGCTTCATACCCCAGGCCACA
CCCCAGACCACCTTGTGGGTTTTGCTCGAGTGCAGGCGGATTCTTTTGTT
CTCATGGGAGCGATGGCACAGCTAGATCTGCCCCAATCCGAGAATACCGT
TGAGGTGTTCCTCATCGATTC
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_22310ATCC64974_22310Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_22310-T1ATCC64974_22310-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_22310-T1.cdsATCC64974_22310-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_22310-T1.exon3ATCC64974_22310-T1.exon3Aspergillus niger N402exon
ATCC64974_22310-T1.exon2ATCC64974_22310-T1.exon2Aspergillus niger N402exon
ATCC64974_22310-T1.exon1ATCC64974_22310-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036866
DBxrefInterPro:IPR001279
DBxrefPFAM:PF00753
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000003.1supercontigOGUI01000003.1:3412103..3413366 -
Powered by Drupal