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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000003.1:3415121..3416920+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_22320-T1 ID=ATCC64974_22320-T1|Name=ATCC64974_22320-T1|organism=Aspergillus niger N402|type=mRNA|length=1800bp|location=Sequence derived from alignment at OGUI01000003.1:3415121..3416920+ (Aspergillus niger N402)
ATGCGGAGCCTTTTCCCAGAACCGACTTCAAATAACGACAACCCACATCT
CGCTGCCATAGATGAGACAGATCCTTCTCAAAACCGTCAATTGGAAGGAA
ATTTCGATCCGTCAATTTCTCCATGGAAAATAGCATCCTCTGATTACGCA
GTGCTGTTGAATCAGATCAACGAGCTTGGCACGTTCTTGCCACCATCCTT
CTCTTTGCCCTCACGCTACACCCTCTCTCGATTTTTAGAAGGGTTCTTCC
GAGGCTATTATGACCACTTCCCATTCTTGCACGTTCCCTCATTCTCCATC
TTATCGCACGGACCGGAGATTGTACTACCACTGGCTGCTGCAGGAGCGTT
CTATCGCTTTGAGCACGGAAAGGGGTACGCAATCTACCACGCTGCACGCT
CCTTGATCAATTCGCAGCTAGAACGACAAAACAGAGAAGTAATCGCCAAT
TTAGCGAAGACCTCACCCGGCTCTGCCTCTACTTCGAGCATCAATGACCA
CCCTCACTGCTTCACTGAGGGTAGTGAAAACCAAATCGCTCAATTTAGGC
TAGCTAAAATGACCCAATACTCATCATCCTTGCGTTTGCTGCAAGGGCTC
ATTGTGTTGATGACGTTGGCTTCATGGGGGAATCGCTCTGTGGTAGGAGA
CGCAATTGCGATATCGGGTCAAGTTGCTATGTTGGCACGCGACCTGGGCA
TATCGGCACAGGATGCTGATCATGAAACAAACTCATGGGAAAACTGGGTC
GAGCAAGAAGAACGACGCAGAACTCTATGGGTAGCTTTTGCTCAATTCAA
TCTGCAAAGTATAGCATTCAATGTGCCGCCTATGATCTTGAACCAAGAGG
TCTTCCTTACTCTGCCAGCCTGTGGCGAAGAATGGAAAGCACGTGATGCC
CGAGCTTGGATGAGCATGCGAAAATTGCATACGCCTGACTCTCGAAGGTT
CCAGCAGGCGTTAAGGCAACTTCTCCAGGGCCACCAGATCCATAAGCCAA
ATTCGATGTCTGCTTTCGCGAATTATGTCTTGCTTCACGGCTTACTACAA
GAGATCTTTTTCGCCCGCAACATAACATCTCTAGACCAATACCCTAGCTC
CATTCAAGATGGCCACACTCGTGTGATAGAAACAGCTCTACAAGCATGGC
AAAACTCCTGGGGGGCAACCTATGAATCAACCATAGATCCACTATCACCC
AGAGGCCCATTGGGATTCAACGCTAGAACTCTATTACAGTTAGCTTACGT
TCGCCTGAATGTCAATATAGGGCCTCATCGTCAACTGGTATCTCACAATC
CAGCGGAAATAGCCCACAGGCTTGTCGACTGCAAAACCATTGCCTTCCAG
CGATCGCCTCCCGTTGACCGTGCGATTCTTCAGTGCATCCACGCGCTAAG
CATTCGGGTTCGCTTAGGGGTCCATTTTATCGCGCACACTCAAATCTCAA
ACTGGAGTATGCAGCATTCACTCTGTAACCTTGAATGTGCATTCCTTCTT
AATCACTGGCTTCAAGACATTGCCCAATGCATCGACACTTCGGGCCTCCA
AACGATACGGGATGAGGAGCGCAAGCTTCTTAGTATCATCTATAGCATTG
TTCGAGAAGCGGATCTGACAGACCTCTCAGACTGGCCAGATGACAATGCA
GCTGCGGTCCGTCGTCTGGCAGTATGTACCGCGCGACTATGGGCTGAAAC
ATACAAGGGCCACCATATATTCGAGATATCTCGCGTTGTTGGCGAGACAC
TTCTGATGATTGCAGATATTCTAGGTGCTCGATCGCCATTTTCAACATGA
back to topCoding sequence (CDS) from alignment at OGUI01000003.1:3415121..3416920+ >ATCC64974_22320-T1 ID=ATCC64974_22320-T1|Name=ATCC64974_22320-T1|organism=Aspergillus niger N402|type=CDS|length=1800bp|location=Sequence derived from alignment at OGUI01000003.1:3415121..3416920+ (Aspergillus niger N402)
ATGCGGAGCCTTTTCCCAGAACCGACTTCAAATAACGACAACCCACATCT
CGCTGCCATAGATGAGACAGATCCTTCTCAAAACCGTCAATTGGAAGGAA
ATTTCGATCCGTCAATTTCTCCATGGAAAATAGCATCCTCTGATTACGCA
GTGCTGTTGAATCAGATCAACGAGCTTGGCACGTTCTTGCCACCATCCTT
CTCTTTGCCCTCACGCTACACCCTCTCTCGATTTTTAGAAGGGTTCTTCC
GAGGCTATTATGACCACTTCCCATTCTTGCACGTTCCCTCATTCTCCATC
TTATCGCACGGACCGGAGATTGTACTACCACTGGCTGCTGCAGGAGCGTT
CTATCGCTTTGAGCACGGAAAGGGGTACGCAATCTACCACGCTGCACGCT
CCTTGATCAATTCGCAGCTAGAACGACAAAACAGAGAAGTAATCGCCAAT
TTAGCGAAGACCTCACCCGGCTCTGCCTCTACTTCGAGCATCAATGACCA
CCCTCACTGCTTCACTGAGGGTAGTGAAAACCAAATCGCTCAATTTAGGC
TAGCTAAAATGACCCAATACTCATCATCCTTGCGTTTGCTGCAAGGGCTC
ATTGTGTTGATGACGTTGGCTTCATGGGGGAATCGCTCTGTGGTAGGAGA
CGCAATTGCGATATCGGGTCAAGTTGCTATGTTGGCACGCGACCTGGGCA
TATCGGCACAGGATGCTGATCATGAAACAAACTCATGGGAAAACTGGGTC
GAGCAAGAAGAACGACGCAGAACTCTATGGGTAGCTTTTGCTCAATTCAA
TCTGCAAAGTATAGCATTCAATGTGCCGCCTATGATCTTGAACCAAGAGG
TCTTCCTTACTCTGCCAGCCTGTGGCGAAGAATGGAAAGCACGTGATGCC
CGAGCTTGGATGAGCATGCGAAAATTGCATACGCCTGACTCTCGAAGGTT
CCAGCAGGCGTTAAGGCAACTTCTCCAGGGCCACCAGATCCATAAGCCAA
ATTCGATGTCTGCTTTCGCGAATTATGTCTTGCTTCACGGCTTACTACAA
GAGATCTTTTTCGCCCGCAACATAACATCTCTAGACCAATACCCTAGCTC
CATTCAAGATGGCCACACTCGTGTGATAGAAACAGCTCTACAAGCATGGC
AAAACTCCTGGGGGGCAACCTATGAATCAACCATAGATCCACTATCACCC
AGAGGCCCATTGGGATTCAACGCTAGAACTCTATTACAGTTAGCTTACGT
TCGCCTGAATGTCAATATAGGGCCTCATCGTCAACTGGTATCTCACAATC
CAGCGGAAATAGCCCACAGGCTTGTCGACTGCAAAACCATTGCCTTCCAG
CGATCGCCTCCCGTTGACCGTGCGATTCTTCAGTGCATCCACGCGCTAAG
CATTCGGGTTCGCTTAGGGGTCCATTTTATCGCGCACACTCAAATCTCAA
ACTGGAGTATGCAGCATTCACTCTGTAACCTTGAATGTGCATTCCTTCTT
AATCACTGGCTTCAAGACATTGCCCAATGCATCGACACTTCGGGCCTCCA
AACGATACGGGATGAGGAGCGCAAGCTTCTTAGTATCATCTATAGCATTG
TTCGAGAAGCGGATCTGACAGACCTCTCAGACTGGCCAGATGACAATGCA
GCTGCGGTCCGTCGTCTGGCAGTATGTACCGCGCGACTATGGGCTGAAAC
ATACAAGGGCCACCATATATTCGAGATATCTCGCGTTGTTGGCGAGACAC
TTCTGATGATTGCAGATATTCTAGGTGCTCGATCGCCATTTTCAACATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006351 | transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_22320-T1 | ATCC64974_22320-T1-protein | Aspergillus niger N402 | polypeptide |
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR007219 |
| DBxref | PFAM:PF04082 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000003.1 | supercontig | OGUI01000003.1:3415121..3416920 + |
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