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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000003.1:3649527..3650605- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_23120-T1 ID=ATCC64974_23120-T1|Name=ATCC64974_23120-T1|organism=Aspergillus niger N402|type=mRNA|length=1079bp|location=Sequence derived from alignment at OGUI01000003.1:3649527..3650605- (Aspergillus niger N402)
ATGCAAGCCACATTTGCGGACAGTCCATCGATAACGGAAACACTCCCGCG
CCAGCGGAAGCCTTCTCTTCCCCCGGGAGCCTTCGCAGAAGAACCAGCAA
CTCCCGAGAAAGTTCTCTTCAATGATGGTGCCCCCATCCTTGTCTCTTAT
GACGAAATCCCCGAATGGTATCAAGACAATGAGTTTATTCGACATGGCTA
TCGACCCGTCTCTAATTCCACTCATGCATGCTTTGCCAGTTGGCTGTATC
TGCACAATGAAACCGTGAACATCTATTCGCATCTTGTTCCCGCCGTCTTC
TTCCTCGCAGCAGAAGGCATGTTTTATCAGTATCTTCAAGTCAAATATCC
CGAAGCCACGTTATCCGACCACGCAATTTTTGCCTTCTTCCTCCTGACTG
CTGTTATATGCTTGGGTCTGTCAACTACCTATCACACACTAATGAATCAC
TCCCTCCAAGTCTCTGAGCTATGGTTACGACTCGACTTTGTTGGTATTAT
CGTCCTGACCCTAGGAGATTTTGTCTCGGGAATTTATATGGTATTCTACT
GTGAGCCTCTGTTGAGACGATTATACTGGGGCATGGTATGGTCGATCACT
CCAGTGCTTTGTACACAAAGCTAATGGATTTTGGAAGATCATCTCACTGA
GTTGCATTACAATAATGATCCTCGTGAACCCCAAATTTAAAGGACCCCGT
TGGCGCACCTTCCGTGTCTGCACTTTCGTCGGCACTGGACTATCTGGCTT
CGCGCCTCTGATTCACGGTATCAGCGTCTTTGGTTTTGCTAAAATGATGG
TGCAGTCTGACATGCCATACTACCTCGGCGAAGGAGGGCTTCTTATTCTA
GGTGCACTTTTTTATACTGTTAGTACCCTGACACAGAAGCAAGATACCAT
ACTAATGATTGATCTAGATGCGCATTCCGGAATCAATCAAGCCCGGGAGG
TTTGACATATTCGGCTGCTCTCATCAGGTATTTCATGTTCTGGTCGTCCT
CACCACAGTTGTTCAGTTGATTGGTATCCTTTCGGCGTTTGACTATAACT
ACAACCATGGAAAATGCAGACTGCCATGA back to topCoding sequence (CDS) from alignment at OGUI01000003.1:3649527..3650605- >ATCC64974_23120-T1 ID=ATCC64974_23120-T1|Name=ATCC64974_23120-T1|organism=Aspergillus niger N402|type=CDS|length=2934bp|location=Sequence derived from alignment at OGUI01000003.1:3649527..3650605- (Aspergillus niger N402)
ATGCGCATTCCGGAATCAATCAAGCCCGGGAGGTTTGACATATTCGGCTG
CTCTCATCAGGTATTTCATGTTCTGGTCGTCCTCACCACAGTTGTTCAGT
TGATTGGTATCCTTTCGGCGTTTGACTATAACTACAACCATGGAAAATGC
AGACTGCCATGAATCATCTCACTGAGTTGCATTACAATAATGATCCTCGT
GAACCCCAAATTTAAAGGACCCCGTTGGCGCACCTTCCGTGTCTGCACTT
TCGTCGGCACTGGACTATCTGGCTTCGCGCCTCTGATTCACGGTATCAGC
GTCTTTGGTTTTGCTAAAATGATGGTGCAGTCTGACATGCCATACTACCT
CGGCGAAGGAGGGCTTCTTATTCTAGGTGCACTTTTTTATACTATGCAAG
CCACATTTGCGGACAGTCCATCGATAACGGAAACACTCCCGCGCCAGCGG
AAGCCTTCTCTTCCCCCGGGAGCCTTCGCAGAAGAACCAGCAACTCCCGA
GAAAGTTCTCTTCAATGATGGTGCCCCCATCCTTGTCTCTTATGACGAAA
TCCCCGAATGGTATCAAGACAATGAGTTTATTCGACATGGCTATCGACCC
GTCTCTAATTCCACTCATGCATGCTTTGCCAGTTGGCTGTATCTGCACAA
TGAAACCGTGAACATCTATTCGCATCTTGTTCCCGCCGTCTTCTTCCTCG
CAGCAGAAGGCATGTTTTATCAGTATCTTCAAGTCAAATATCCCGAAGCC
ACGTTATCCGACCACGCAATTTTTGCCTTCTTCCTCCTGACTGCTGTTAT
ATGCTTGGGTCTGTCAACTACCTATCACACACTAATGAATCACTCCCTCC
AAGTCTCTGAGCTATGGTTACGACTCGACTTTGTTGGTATTATCGTCCTG
ACCCTAGGAGATTTTGTCTCGGGAATTTATATGGTATTCTACTGTGAGCC
TCTGTTGAGACGATTATACTGGGGCATGATGCGCATTCCGGAATCAATCA
AGCCCGGGAGGTTTGACATATTCGGCTGCTCTCATCAGGTATTTCATGTT
CTGGTCGTCCTCACCACAGTTGTTCAGTTGATTGGTATCCTTTCGGCGTT
TGACTATAACTACAACCATGGAAAATGCAGACTGCCATGAATCATCTCAC
TGAGTTGCATTACAATAATGATCCTCGTGAACCCCAAATTTAAAGGACCC
CGTTGGCGCACCTTCCGTGTCTGCACTTTCGTCGGCACTGGACTATCTGG
CTTCGCGCCTCTGATTCACGGTATCAGCGTCTTTGGTTTTGCTAAAATGA
TGGTGCAGTCTGACATGCCATACTACCTCGGCGAAGGAGGGCTTCTTATT
CTAGGTGCACTTTTTTATACTATGCAAGCCACATTTGCGGACAGTCCATC
GATAACGGAAACACTCCCGCGCCAGCGGAAGCCTTCTCTTCCCCCGGGAG
CCTTCGCAGAAGAACCAGCAACTCCCGAGAAAGTTCTCTTCAATGATGGT
GCCCCCATCCTTGTCTCTTATGACGAAATCCCCGAATGGTATCAAGACAA
TGAGTTTATTCGACATGGCTATCGACCCGTCTCTAATTCCACTCATGCAT
GCTTTGCCAGTTGGCTGTATCTGCACAATGAAACCGTGAACATCTATTCG
CATCTTGTTCCCGCCGTCTTCTTCCTCGCAGCAGAAGGCATGTTTTATCA
GTATCTTCAAGTCAAATATCCCGAAGCCACGTTATCCGACCACGCAATTT
TTGCCTTCTTCCTCCTGACTGCTGTTATATGCTTGGGTCTGTCAACTACC
TATCACACACTAATGAATCACTCCCTCCAAGTCTCTGAGCTATGGTTACG
ACTCGACTTTGTTGGTATTATCGTCCTGACCCTAGGAGATTTTGTCTCGG
GAATTTATATGGTATTCTACTGTGAGCCTCTGTTGAGACGATTATACTGG
GGCATGATGCGCATTCCGGAATCAATCAAGCCCGGGAGGTTTGACATATT
CGGCTGCTCTCATCAGGTATTTCATGTTCTGGTCGTCCTCACCACAGTTG
TTCAGTTGATTGGTATCCTTTCGGCGTTTGACTATAACTACAACCATGGA
AAATGCAGACTGCCATGAATCATCTCACTGAGTTGCATTACAATAATGAT
CCTCGTGAACCCCAAATTTAAAGGACCCCGTTGGCGCACCTTCCGTGTCT
GCACTTTCGTCGGCACTGGACTATCTGGCTTCGCGCCTCTGATTCACGGT
ATCAGCGTCTTTGGTTTTGCTAAAATGATGGTGCAGTCTGACATGCCATA
CTACCTCGGCGAAGGAGGGCTTCTTATTCTAGGTGCACTTTTTTATACTA
TGCAAGCCACATTTGCGGACAGTCCATCGATAACGGAAACACTCCCGCGC
CAGCGGAAGCCTTCTCTTCCCCCGGGAGCCTTCGCAGAAGAACCAGCAAC
TCCCGAGAAAGTTCTCTTCAATGATGGTGCCCCCATCCTTGTCTCTTATG
ACGAAATCCCCGAATGGTATCAAGACAATGAGTTTATTCGACATGGCTAT
CGACCCGTCTCTAATTCCACTCATGCATGCTTTGCCAGTTGGCTGTATCT
GCACAATGAAACCGTGAACATCTATTCGCATCTTGTTCCCGCCGTCTTCT
TCCTCGCAGCAGAAGGCATGTTTTATCAGTATCTTCAAGTCAAATATCCC
GAAGCCACGTTATCCGACCACGCAATTTTTGCCTTCTTCCTCCTGACTGC
TGTTATATGCTTGGGTCTGTCAACTACCTATCACACACTAATGAATCACT
CCCTCCAAGTCTCTGAGCTATGGTTACGACTCGACTTTGTTGGTATTATC
GTCCTGACCCTAGGAGATTTTGTCTCGGGAATTTATATGGTATTCTACTG
TGAGCCTCTGTTGAGACGATTATACTGGGGCATG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_23120-T1 | ATCC64974_23120-T1-protein | Aspergillus niger N402 | polypeptide |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR004254 |
| DBxref | PFAM:PF03006 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000003.1 | supercontig | OGUI01000003.1:3649527..3650605 - |
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