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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000003.1:3666174..3667477- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_23180-T1 ID=ATCC64974_23180-T1|Name=ATCC64974_23180-T1|organism=Aspergillus niger N402|type=mRNA|length=1304bp|location=Sequence derived from alignment at OGUI01000003.1:3666174..3667477- (Aspergillus niger N402)
ATGTCTGCCGATAATGAAAAGTCCGCGGCCGTTGCCGACGTGCAGCCCCA
ACCCGAGTATTCCACGGAAAAGACAGAGCAGGTGCATACTGTGACCGAAA
CGTCGGAGCAGACCAGTCAACCGCATGATCAGGAGGCCCAGCAGGAGCAG
CAGCCGACCCAGGGTCGCGCGGCCAGGCTATTTGCCTACATGAAGACCCG
CGATTTCTGGTTGGTCTTGATTTTAGGGTGAGTACATCTCCTTCTTCTTC
TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTACGGAGAAA
AATACTGTCAGATACTAATCTACAATAGTCAAATCATCGCGCTGGCCGAC
ATCAGCTCCTCCACCTTCTCGACCCTCCTCTCCAACGCGGGCAACAGTAT
CCCCGCCTTCCAGACCCTTTGGATCTACATCCTGCTCAATCTTGTCTACA
CCAGCATTACCCTCTACAAGTACGGCTTCAAGAAATGGTTTCAAATGCTT
TACCGTGACTGCTGGCGGTACTTCATTCTTGCCTTCCTGGACGTCGAAGG
CAACTACTTCATGGTGCTCGCCTACCGCTATACCTCGCTGCTCAGCGCTG
AGCTTTTCAGCTTCTGGACCATCATCTGTGTCGCCATCATCTCCTTCATC
TTCCTGCGCGTCCGCTACCACATCACCCAGTACCTTGGCATCTTCCTCGC
CTGCGGTGGCCTGGGCATGCTCATCGCCTCCGACTACCTGCGCGGTGCCA
ACTACCCCGCCGAAGATCAAGTGAAGGGTGACCTGTTTGCCCTCCTAGCC
TGCACTATCTACGCCTTCAGCAACCTATTTGAAGAGTTCATGGTTTCCAA
GCGGCCCATGTATGAGGTCGTCGGCCAGATGGGCTTCTGGGGTATGTTCA
TCAATGGCGTGCAGTGCGCCATCTTCGACCGAAGCTCCTTCCACGGCGCC
ACCTGGGACAAGAAAGTCGGCGGGTACATTGCGGGCTACACCATAGTGCT
GTTTATCTTCTACACGTTGGCGCCCATCATGCTACGCGTGTCATCGGCCA
TGTTTTTCAACATCTCCTTGCTGACGATGAACTTCTGGGGCTTGATCATC
GGTATCCAGGTGTTCCATTACTCCGTGCAATTCCTGTATCCCATTGCCTT
TGTGCTGATCGTCATTGGCCTGTTTGTGTACTTCATCATGGAGGGCGAGA
TGGGTGAGGCGAAGAAGCCGTGGCTAGGAAAGGATCAGGAGCGCGGAGTG
GATGGTGTGGGAACGGGTCGTCGCGCGCAGCAAACGGGACATGCAATTGT
CTAG back to topCoding sequence (CDS) from alignment at OGUI01000003.1:3666174..3667477- >ATCC64974_23180-T1 ID=ATCC64974_23180-T1|Name=ATCC64974_23180-T1|organism=Aspergillus niger N402|type=CDS|length=2406bp|location=Sequence derived from alignment at OGUI01000003.1:3666174..3667477- (Aspergillus niger N402)
TCAAATCATCGCGCTGGCCGACATCAGCTCCTCCACCTTCTCGACCCTCC
TCTCCAACGCGGGCAACAGTATCCCCGCCTTCCAGACCCTTTGGATCTAC
ATCCTGCTCAATCTTGTCTACACCAGCATTACCCTCTACAAGTACGGCTT
CAAGAAATGGTTTCAAATGCTTTACCGTGACTGCTGGCGGTACTTCATTC
TTGCCTTCCTGGACGTCGAAGGCAACTACTTCATGGTGCTCGCCTACCGC
TATACCTCGCTGCTCAGCGCTGAGCTTTTCAGCTTCTGGACCATCATCTG
TGTCGCCATCATCTCCTTCATCTTCCTGCGCGTCCGCTACCACATCACCC
AGTACCTTGGCATCTTCCTCGCCTGCGGTGGCCTGGGCATGCTCATCGCC
TCCGACTACCTGCGCGGTGCCAACTACCCCGCCGAAGATCAAGTGAAGGG
TGACCTGTTTGCCCTCCTAGCCTGCACTATCTACGCCTTCAGCAACCTAT
TTGAAGAGTTCATGGTTTCCAAGCGGCCCATGTATGAGGTCGTCGGCCAG
ATGGGCTTCTGGGGTATGTTCATCAATGGCGTGCAGTGCGCCATCTTCGA
CCGAAGCTCCTTCCACGGCGCCACCTGGGACAAGAAAGTCGGCGGGTACA
TTGCGGGCTACACCATAGTGCTGTTTATCTTCTACACGTTGGCGCCCATC
ATGCTACGCGTGTCATCGGCCATGTTTTTCAACATCTCCTTGCTGACGAT
GAACTTCTGGGGCTTGATCATCGGTATCCAGGTGTTCCATTACTCCGTGC
AATTCCTGTATCCCATTGCCTTTGTGCTGATCGTCATTGGCCTGTTTGTG
TACTTCATCATGGAGGGCGAGATGGGTGAGGCGAAGAAGCCGTGGCTAGG
AAAGGATCAGGAGCGCGGAGTGGATGGTGTGGGAACGGGTCGTCGCGCGC
AGCAAACGGGACATGCAATTGTCTAGATGTCTGCCGATAATGAAAAGTCC
GCGGCCGTTGCCGACGTGCAGCCCCAACCCGAGTATTCCACGGAAAAGAC
AGAGCAGGTGCATACTGTGACCGAAACGTCGGAGCAGACCAGTCAACCGC
ATGATCAGGAGGCCCAGCAGGAGCAGCAGCCGACCCAGGGTCGCGCGGCC
AGGCTATTTGCCTACATGAAGACCCGCGATTTCTGGTTGGTCTTGATTTT
AGGTCAAATCATCGCGCTGGCCGACATCAGCTCCTCCACCTTCTCGACCC
TCCTCTCCAACGCGGGCAACAGTATCCCCGCCTTCCAGACCCTTTGGATC
TACATCCTGCTCAATCTTGTCTACACCAGCATTACCCTCTACAAGTACGG
CTTCAAGAAATGGTTTCAAATGCTTTACCGTGACTGCTGGCGGTACTTCA
TTCTTGCCTTCCTGGACGTCGAAGGCAACTACTTCATGGTGCTCGCCTAC
CGCTATACCTCGCTGCTCAGCGCTGAGCTTTTCAGCTTCTGGACCATCAT
CTGTGTCGCCATCATCTCCTTCATCTTCCTGCGCGTCCGCTACCACATCA
CCCAGTACCTTGGCATCTTCCTCGCCTGCGGTGGCCTGGGCATGCTCATC
GCCTCCGACTACCTGCGCGGTGCCAACTACCCCGCCGAAGATCAAGTGAA
GGGTGACCTGTTTGCCCTCCTAGCCTGCACTATCTACGCCTTCAGCAACC
TATTTGAAGAGTTCATGGTTTCCAAGCGGCCCATGTATGAGGTCGTCGGC
CAGATGGGCTTCTGGGGTATGTTCATCAATGGCGTGCAGTGCGCCATCTT
CGACCGAAGCTCCTTCCACGGCGCCACCTGGGACAAGAAAGTCGGCGGGT
ACATTGCGGGCTACACCATAGTGCTGTTTATCTTCTACACGTTGGCGCCC
ATCATGCTACGCGTGTCATCGGCCATGTTTTTCAACATCTCCTTGCTGAC
GATGAACTTCTGGGGCTTGATCATCGGTATCCAGGTGTTCCATTACTCCG
TGCAATTCCTGTATCCCATTGCCTTTGTGCTGATCGTCATTGGCCTGTTT
GTGTACTTCATCATGGAGGGCGAGATGGGTGAGGCGAAGAAGCCGTGGCT
AGGAAAGGATCAGGAGCGCGGAGTGGATGGTGTGGGAACGGGTCGTCGCG
CGCAGCAAACGGGACATGCAATTGTCTAGATGTCTGCCGATAATGAAAAG
TCCGCGGCCGTTGCCGACGTGCAGCCCCAACCCGAGTATTCCACGGAAAA
GACAGAGCAGGTGCATACTGTGACCGAAACGTCGGAGCAGACCAGTCAAC
CGCATGATCAGGAGGCCCAGCAGGAGCAGCAGCCGACCCAGGGTCGCGCG
GCCAGGCTATTTGCCTACATGAAGACCCGCGATTTCTGGTTGGTCTTGAT
TTTAGG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_23180-T1 | ATCC64974_23180-T1-protein | Aspergillus niger N402 | polypeptide |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR009262 |
| DBxref | PFAM:PF06027 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000003.1 | supercontig | OGUI01000003.1:3666174..3667477 - |
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