You are here

Home

ATCC64974_23280-T1, ATCC64974_23280-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_23280-T1
Unique NameATCC64974_23280-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000003.1:3695773..3697439+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_23280-T1 ID=ATCC64974_23280-T1|Name=ATCC64974_23280-T1|organism=Aspergillus niger N402|type=mRNA|length=1667bp|location=Sequence derived from alignment at OGUI01000003.1:3695773..3697439+ (Aspergillus niger N402)
ATGTCGGCCCCGTCCGATGCATCTGCCTCCGCTTCTTCGCGAGGGACGCG
TGTGCATCACCGCATCCTCGCTGAACTTGGCCTGACTTCAGTCTGGCAAT
CCCCTCGCGATGTCAAACTTCTCTGCGCCCAGCGCTTTGTGCGTCTCTTC
GCCTACGGTGGTTCGACTCTGATTCTGGCTGCCTATCTCTCAGCATTGGG
TATCTCCGATGAACGCATCGGTCTTTTCATGACCTTGACCCTGGTGGGCG
ATGTCGCCATCAGCTTCCTCCTCACCCTGTTTGCCGACGCCATGGGTCGC
AGGGCTGTCCTGGCCCTGGGTTCAGCCTTAATGGTCGGGAGTGGCATCCT
CTTTGCTTCGGTCGGCAATTACTGGGTCCTTCTGGCGGCAGCCGTCTTTG
GCGTCATAAGTCCGAGGTAAGTTCTCCGATCTCCGAGCAAAACATCCGAC
TATTTATAGTATCTCCGACATGTCTGGGCATACGCGCTTACAAACTCAAT
AAAACAGTGGAAACGAAATTGGCCCCTTCCGGGCTGTCGAAGAATCAACT
TTGGCCCATCTGGCCCCCAATGACATCTTGAGCGATATCTTCGCATGGTA
CTCGCTCATTGGCAATGCGGGAACCGCTCTGGGCATGATGACTGGCGGAT
GGGCCATCAACCTGCTTCAGGTTATCTGGGGATGGCCCTATATTCCCGCC
TGTAGAGTCATCTTCTTCGCCTATGCCGCTATTGGCGCGCTCAAGTTTCT
CCTGTCTATTGCACTGAGCTCCGCTGTGGAGGCTGAGAAGAAGAAGCCTG
CGCGACAGTCTACTAATGAGGGTGAAAGACAGCCTCTGCTGGGCGATCAA
ACGGGCAACGCCACCCCCCAAGAGCAGCAGCCTCAGAAGAAGAAATCAAT
TCTGTCTTTCCTCGGCGATTCCGAGGTCGTCTCCTTGTTTCTGCGACTTG
CGATTCTGTTCGGTTTGGACTCATTCGCCTCTGGACTGGCGTCTCTGTAT
GTTTCCACCTAGAGGCTTGGCAACTCTTTCCAACTCGGCCCTAGAATCCG
TATAGTTCGATGAAACTGACATGTCCTTTAGATCCTGGATGACATACTTC
TTCAAGCGCAAGTTCTCCCTCCCTGAAGGGTCACTCGGATCCATCTTCTT
CACTACCAGCCTTATCTCTGCGGCTTCCGTGCTGGTGGCCTCATCCATCG
CCAAGCGCATTGGCAATGTTAAGGTCTGCTTTGCCCCAAGATATACATTC
CTTCCTTACCCTTGCTGACCACTACAGACCATGGTCTTCACTCATCTTCC
CTCCGCTATTTGCCTGGCACTCATCCCAGTTCCTTCGATTCTCCCGCTGG
CGCTAACCTTTTTGATCCTCCGCGCCTGCTCTCAAACTATGGATGTGGCT
CCTCGCTCCGCCTTTCTGGCTGCAGCGCTGCCGCCAGACCGTCGCACAGC
TATCATGGGCTCTATCAACGTCGTCAAAACCTGCGCCCAGAGCCTTGGAC
CTCTGTTGACCGGTATCTTGGCCGATCGAGGAGTCTTCGGGGTTTCGTTC
ACCATCGCGGGTATCCTGAAGGCCGTCTATGACATCGGCATGCTGCTCAG
TTTTGCCGGAAAGGAAAAGCAGCAGCGGCGACCGGCACCAAGGAATGAAG
ATGAAGAGGCCGCCTAG
back to top

Coding sequence (CDS) from alignment at OGUI01000003.1:3695773..3697439+

>ATCC64974_23280-T1 ID=ATCC64974_23280-T1|Name=ATCC64974_23280-T1|organism=Aspergillus niger N402|type=CDS|length=5748bp|location=Sequence derived from alignment at OGUI01000003.1:3695773..3697439+ (Aspergillus niger N402)
ATGTCGGCCCCGTCCGATGCATCTGCCTCCGCTTCTTCGCGAGGGACGCG
TGTGCATCACCGCATCCTCGCTGAACTTGGCCTGACTTCAGTCTGGCAAT
CCCCTCGCGATGTCAAACTTCTCTGCGCCCAGCGCTTTGTGCGTCTCTTC
GCCTACGGTGGTTCGACTCTGATTCTGGCTGCCTATCTCTCAGCATTGGG
TATCTCCGATGAACGCATCGGTCTTTTCATGACCTTGACCCTGGTGGGCG
ATGTCGCCATCAGCTTCCTCCTCACCCTGTTTGCCGACGCCATGGGTCGC
AGGGCTGTCCTGGCCCTGGGTTCAGCCTTAATGGTCGGGAGTGGCATCCT
CTTTGCTTCGGTCGGCAATTACTGGGTCCTTCTGGCGGCAGCCGTCTTTG
GCGTCATAAGTCCGAGTGGAAACGAAATTGGCCCCTTCCGGGCTGTCGAA
GAATCAACTTTGGCCCATCTGGCCCCCAATGACATCTTGAGCGATATCTT
CGCATGGTACTCGCTCATTGGCAATGCGGGAACCGCTCTGGGCATGATGA
CTGGCGGATGGGCCATCAACCTGCTTCAGGTTATCTGGGGATGGCCCTAT
ATTCCCGCCTGTAGAGTCATCTTCTTCGCCTATGCCGCTATTGGCGCGCT
CAAGTTTCTCCTGTCTATTGCACTGAGCTCCGCTGTGGAGGCTGAGAAGA
AGAAGCCTGCGCGACAGTCTACTAATGAGGGTGAAAGACAGCCTCTGCTG
GGCGATCAAACGGGCAACGCCACCCCCCAAGAGCAGCAGCCTCAGAAGAA
GAAATCAATTCTGTCTTTCCTCGGCGATTCCGAGGTCGTCTCCTTGTTTC
TGCGACTTGCGATTCTGTTCGGTTTGGACTCATTCGCCTCTGGACTGGCG
TCTCTATCCTGGATGACATACTTCTTCAAGCGCAAGTTCTCCCTCCCTGA
AGGGTCACTCGGATCCATCTTCTTCACTACCAGCCTTATCTCTGCGGCTT
CCGTGCTGGTGGCCTCATCCATCGCCAAGCGCATTGGCAATGTTAAGACC
ATGGTCTTCACTCATCTTCCCTCCGCTATTTGCCTGGCACTCATCCCAGT
TCCTTCGATTCTCCCGCTGGCGCTAACCTTTTTGATCCTCCGCGCCTGCT
CTCAAACTATGGATGTGGCTCCTCGCTCCGCCTTTCTGGCTGCAGCGCTG
CCGCCAGACCGTCGCACAGCTATCATGGGCTCTATCAACGTCGTCAAAAC
CTGCGCCCAGAGCCTTGGACCTCTGTTGACCGGTATCTTGGCCGATCGAG
GAGTCTTCGGGGTTTCGTTCACCATCGCGGGTATCCTGAAGGCCGTCTAT
GACATCGGCATGCTGCTCAGTTTTGCCGGAAAGGAAAAGCAGCAGCGGCG
ACCGGCACCAAGGAATGAAGATGAAGAGGCCGCCTAGATGTCGGCCCCGT
CCGATGCATCTGCCTCCGCTTCTTCGCGAGGGACGCGTGTGCATCACCGC
ATCCTCGCTGAACTTGGCCTGACTTCAGTCTGGCAATCCCCTCGCGATGT
CAAACTTCTCTGCGCCCAGCGCTTTGTGCGTCTCTTCGCCTACGGTGGTT
CGACTCTGATTCTGGCTGCCTATCTCTCAGCATTGGGTATCTCCGATGAA
CGCATCGGTCTTTTCATGACCTTGACCCTGGTGGGCGATGTCGCCATCAG
CTTCCTCCTCACCCTGTTTGCCGACGCCATGGGTCGCAGGGCTGTCCTGG
CCCTGGGTTCAGCCTTAATGGTCGGGAGTGGCATCCTCTTTGCTTCGGTC
GGCAATTACTGGGTCCTTCTGGCGGCAGCCGTCTTTGGCGTCATAAGTCC
GAGTGGAAACGAAATTGGCCCCTTCCGGGCTGTCGAAGAATCAACTTTGG
CCCATCTGGCCCCCAATGACATCTTGAGCGATATCTTCGCATGGTACTCG
CTCATTGGCAATGCGGGAACCGCTCTGGGCATGATGACTGGCGGATGGGC
CATCAACCTGCTTCAGGTTATCTGGGGATGGCCCTATATTCCCGCCTGTA
GAGTCATCTTCTTCGCCTATGCCGCTATTGGCGCGCTCAAGTTTCTCCTG
TCTATTGCACTGAGCTCCGCTGTGGAGGCTGAGAAGAAGAAGCCTGCGCG
ACAGTCTACTAATGAGGGTGAAAGACAGCCTCTGCTGGGCGATCAAACGG
GCAACGCCACCCCCCAAGAGCAGCAGCCTCAGAAGAAGAAATCAATTCTG
TCTTTCCTCGGCGATTCCGAGGTCGTCTCCTTGTTTCTGCGACTTGCGAT
TCTGTTCGGTTTGGACTCATTCGCCTCTGGACTGGCGTCTCTATCCTGGA
TGACATACTTCTTCAAGCGCAAGTTCTCCCTCCCTGAAGGGTCACTCGGA
TCCATCTTCTTCACTACCAGCCTTATCTCTGCGGCTTCCGTGCTGGTGGC
CTCATCCATCGCCAAGCGCATTGGCAATGTTAAGACCATGGTCTTCACTC
ATCTTCCCTCCGCTATTTGCCTGGCACTCATCCCAGTTCCTTCGATTCTC
CCGCTGGCGCTAACCTTTTTGATCCTCCGCGCCTGCTCTCAAACTATGGA
TGTGGCTCCTCGCTCCGCCTTTCTGGCTGCAGCGCTGCCGCCAGACCGTC
GCACAGCTATCATGGGCTCTATCAACGTCGTCAAAACCTGCGCCCAGAGC
CTTGGACCTCTGTTGACCGGTATCTTGGCCGATCGAGGAGTCTTCGGGGT
TTCGTTCACCATCGCGGGTATCCTGAAGGCCGTCTATGACATCGGCATGC
TGCTCAGTTTTGCCGGAAAGGAAAAGCAGCAGCGGCGACCGGCACCAAGG
AATGAAGATGAAGAGGCCGCCTAGATGTCGGCCCCGTCCGATGCATCTGC
CTCCGCTTCTTCGCGAGGGACGCGTGTGCATCACCGCATCCTCGCTGAAC
TTGGCCTGACTTCAGTCTGGCAATCCCCTCGCGATGTCAAACTTCTCTGC
GCCCAGCGCTTTGTGCGTCTCTTCGCCTACGGTGGTTCGACTCTGATTCT
GGCTGCCTATCTCTCAGCATTGGGTATCTCCGATGAACGCATCGGTCTTT
TCATGACCTTGACCCTGGTGGGCGATGTCGCCATCAGCTTCCTCCTCACC
CTGTTTGCCGACGCCATGGGTCGCAGGGCTGTCCTGGCCCTGGGTTCAGC
CTTAATGGTCGGGAGTGGCATCCTCTTTGCTTCGGTCGGCAATTACTGGG
TCCTTCTGGCGGCAGCCGTCTTTGGCGTCATAAGTCCGAGTGGAAACGAA
ATTGGCCCCTTCCGGGCTGTCGAAGAATCAACTTTGGCCCATCTGGCCCC
CAATGACATCTTGAGCGATATCTTCGCATGGTACTCGCTCATTGGCAATG
CGGGAACCGCTCTGGGCATGATGACTGGCGGATGGGCCATCAACCTGCTT
CAGGTTATCTGGGGATGGCCCTATATTCCCGCCTGTAGAGTCATCTTCTT
CGCCTATGCCGCTATTGGCGCGCTCAAGTTTCTCCTGTCTATTGCACTGA
GCTCCGCTGTGGAGGCTGAGAAGAAGAAGCCTGCGCGACAGTCTACTAAT
GAGGGTGAAAGACAGCCTCTGCTGGGCGATCAAACGGGCAACGCCACCCC
CCAAGAGCAGCAGCCTCAGAAGAAGAAATCAATTCTGTCTTTCCTCGGCG
ATTCCGAGGTCGTCTCCTTGTTTCTGCGACTTGCGATTCTGTTCGGTTTG
GACTCATTCGCCTCTGGACTGGCGTCTCTATCCTGGATGACATACTTCTT
CAAGCGCAAGTTCTCCCTCCCTGAAGGGTCACTCGGATCCATCTTCTTCA
CTACCAGCCTTATCTCTGCGGCTTCCGTGCTGGTGGCCTCATCCATCGCC
AAGCGCATTGGCAATGTTAAGACCATGGTCTTCACTCATCTTCCCTCCGC
TATTTGCCTGGCACTCATCCCAGTTCCTTCGATTCTCCCGCTGGCGCTAA
CCTTTTTGATCCTCCGCGCCTGCTCTCAAACTATGGATGTGGCTCCTCGC
TCCGCCTTTCTGGCTGCAGCGCTGCCGCCAGACCGTCGCACAGCTATCAT
GGGCTCTATCAACGTCGTCAAAACCTGCGCCCAGAGCCTTGGACCTCTGT
TGACCGGTATCTTGGCCGATCGAGGAGTCTTCGGGGTTTCGTTCACCATC
GCGGGTATCCTGAAGGCCGTCTATGACATCGGCATGCTGCTCAGTTTTGC
CGGAAAGGAAAAGCAGCAGCGGCGACCGGCACCAAGGAATGAAGATGAAG
AGGCCGCCTAGATGTCGGCCCCGTCCGATGCATCTGCCTCCGCTTCTTCG
CGAGGGACGCGTGTGCATCACCGCATCCTCGCTGAACTTGGCCTGACTTC
AGTCTGGCAATCCCCTCGCGATGTCAAACTTCTCTGCGCCCAGCGCTTTG
TGCGTCTCTTCGCCTACGGTGGTTCGACTCTGATTCTGGCTGCCTATCTC
TCAGCATTGGGTATCTCCGATGAACGCATCGGTCTTTTCATGACCTTGAC
CCTGGTGGGCGATGTCGCCATCAGCTTCCTCCTCACCCTGTTTGCCGACG
CCATGGGTCGCAGGGCTGTCCTGGCCCTGGGTTCAGCCTTAATGGTCGGG
AGTGGCATCCTCTTTGCTTCGGTCGGCAATTACTGGGTCCTTCTGGCGGC
AGCCGTCTTTGGCGTCATAAGTCCGAGTGGAAACGAAATTGGCCCCTTCC
GGGCTGTCGAAGAATCAACTTTGGCCCATCTGGCCCCCAATGACATCTTG
AGCGATATCTTCGCATGGTACTCGCTCATTGGCAATGCGGGAACCGCTCT
GGGCATGATGACTGGCGGATGGGCCATCAACCTGCTTCAGGTTATCTGGG
GATGGCCCTATATTCCCGCCTGTAGAGTCATCTTCTTCGCCTATGCCGCT
ATTGGCGCGCTCAAGTTTCTCCTGTCTATTGCACTGAGCTCCGCTGTGGA
GGCTGAGAAGAAGAAGCCTGCGCGACAGTCTACTAATGAGGGTGAAAGAC
AGCCTCTGCTGGGCGATCAAACGGGCAACGCCACCCCCCAAGAGCAGCAG
CCTCAGAAGAAGAAATCAATTCTGTCTTTCCTCGGCGATTCCGAGGTCGT
CTCCTTGTTTCTGCGACTTGCGATTCTGTTCGGTTTGGACTCATTCGCCT
CTGGACTGGCGTCTCTATCCTGGATGACATACTTCTTCAAGCGCAAGTTC
TCCCTCCCTGAAGGGTCACTCGGATCCATCTTCTTCACTACCAGCCTTAT
CTCTGCGGCTTCCGTGCTGGTGGCCTCATCCATCGCCAAGCGCATTGGCA
ATGTTAAGACCATGGTCTTCACTCATCTTCCCTCCGCTATTTGCCTGGCA
CTCATCCCAGTTCCTTCGATTCTCCCGCTGGCGCTAACCTTTTTGATCCT
CCGCGCCTGCTCTCAAACTATGGATGTGGCTCCTCGCTCCGCCTTTCTGG
CTGCAGCGCTGCCGCCAGACCGTCGCACAGCTATCATGGGCTCTATCAAC
GTCGTCAAAACCTGCGCCCAGAGCCTTGGACCTCTGTTGACCGGTATCTT
GGCCGATCGAGGAGTCTTCGGGGTTTCGTTCACCATCGCGGGTATCCTGA
AGGCCGTCTATGACATCGGCATGCTGCTCAGTTTTGCCGGAAAGGAAAAG
CAGCAGCGGCGACCGGCACCAAGGAATGAAGATGAAGAGGCCGCCTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005887integral component of plasma membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_23280ATCC64974_23280Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_23280-T1.exon1ATCC64974_23280-T1.exon1Aspergillus niger N402exon
ATCC64974_23280-T1.exon2ATCC64974_23280-T1.exon2Aspergillus niger N402exon
ATCC64974_23280-T1.exon3ATCC64974_23280-T1.exon3Aspergillus niger N402exon
ATCC64974_23280-T1.exon4ATCC64974_23280-T1.exon4Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_23280-T1.cdsATCC64974_23280-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_23280-T1ATCC64974_23280-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF00083
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000003.1supercontigOGUI01000003.1:3695773..3697439 +
Powered by Drupal