You are here

Home

ATCC64974_23410-T1, ATCC64974_23410-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_23410-T1
Unique NameATCC64974_23410-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000003.1:3727038..3728146+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_23410-T1 ID=ATCC64974_23410-T1|Name=ATCC64974_23410-T1|organism=Aspergillus niger N402|type=mRNA|length=1109bp|location=Sequence derived from alignment at OGUI01000003.1:3727038..3728146+ (Aspergillus niger N402)
ATGGCTGCCTCGAAAGAAAGCATGCCATCCAAACCAGAGGATATCGAAAC
GCGCTCCATATTTTCAATGCAAGAGTTAGACCCATCACCAGTACAAGATG
AGTTTCCAGACCTTGAATCTGGTGACTACTTCCCCAGAGAACCAAGTCCG
CCATCGGCACGCGAGCCCATCGCCGGGGGTGGTCGGTTCTCGTCGCTCAA
GTTAGGCCTTCGCGGACATAGTTGGGATTCCTGGTGTATGGCTAAGTATA
TGCAAGCTATTGTGATAATAGCAAGAATTTACTCTTTTCCTAGAAGCTAA
CAGTGGCCTCAAATTCTCCAGTATCTGCGTTCCAACGATACTCGACGTAT
CCACCGACCCTATTCTTTGCATTGCATTGGGCCAATACCTCTCTCATCCC
TCTGGCTACTCGATCTGTGCCCGACAGCGAGAGCTTCCTGCTTCTCACCA
GACCCGTCTATCAATCTCCGGGCCTCGAACATCTCGTTCTGACCGCGCCT
GTTCTGATTCATATTGCGTCTGGAATTGCTTTGCGCAACATCCGCTCCGC
ACGGCGGGCTCGACTCTATGGCGCCGAGACAAGGTCACAGAGACACTCCT
TGACGTTTTGGCCTCGGATGAGCCTCCAAGCTCGGTTAGGATATTCCTTA
GTTCCGTTACTCGGCGTCCATGTGCTCGTCAACCGCATCACTCCGTTGAT
GGTTGATGGGGGAAGCTCGGGAGTCGGGCTGGGTTATGTGGCCCACGGCT
TTGCACGGGCCCCCGCACTCTGGAATCTGTACTATTTGTTATTCGTCGCC
GTTGGGGTGTGGCACTTCGTCGGCGGCTGGGCTGCATGGATGGGCTGGAG
AGTGACAACGGTCCGGAAGGAACGTGACCGAAAGAAAGGCTCCCTAGAGG
GTTATCTGGGAGCCTCGGAAAGTGAGCAACGACTCCGCCGACAGAGGAAG
ATGTGGTGGACGGTCAACGGCATTGCCGCGGTGGGAGCATCCATATGGCT
TGCAGGTGCCCTGGGAATCATCGGGCGTACGGGGCAGGGTTATGGCTGGG
AGGCCAAGGGATGGAATGAGATCTACAGCCAGGTCCCCGTTATTGGGTCC
TGGCTCTGA
back to top

Coding sequence (CDS) from alignment at OGUI01000003.1:3727038..3728146+

>ATCC64974_23410-T1 ID=ATCC64974_23410-T1|Name=ATCC64974_23410-T1|organism=Aspergillus niger N402|type=CDS|length=2046bp|location=Sequence derived from alignment at OGUI01000003.1:3727038..3728146+ (Aspergillus niger N402)
ATGGCTGCCTCGAAAGAAAGCATGCCATCCAAACCAGAGGATATCGAAAC
GCGCTCCATATTTTCAATGCAAGAGTTAGACCCATCACCAGTACAAGATG
AGTTTCCAGACCTTGAATCTGGTGACTACTTCCCCAGAGAACCAAGTCCG
CCATCGGCACGCGAGCCCATCGCCGGGGGTGGTCGGTTCTCGTCGCTCAA
GTTAGGCCTTCGCGGACATAGTTGGGATTCCTGGTTATCTGCGTTCCAAC
GATACTCGACGTATCCACCGACCCTATTCTTTGCATTGCATTGGGCCAAT
ACCTCTCTCATCCCTCTGGCTACTCGATCTGTGCCCGACAGCGAGAGCTT
CCTGCTTCTCACCAGACCCGTCTATCAATCTCCGGGCCTCGAACATCTCG
TTCTGACCGCGCCTGTTCTGATTCATATTGCGTCTGGAATTGCTTTGCGC
AACATCCGCTCCGCACGGCGGGCTCGACTCTATGGCGCCGAGACAAGGTC
ACAGAGACACTCCTTGACGTTTTGGCCTCGGATGAGCCTCCAAGCTCGGT
TAGGATATTCCTTAGTTCCGTTACTCGGCGTCCATGTGCTCGTCAACCGC
ATCACTCCGTTGATGGTTGATGGGGGAAGCTCGGGAGTCGGGCTGGGTTA
TGTGGCCCACGGCTTTGCACGGGCCCCCGCACTCTGGAATCTGTACTATT
TGTTATTCGTCGCCGTTGGGGTGTGGCACTTCGTCGGCGGCTGGGCTGCA
TGGATGGGCTGGAGAGTGACAACGGTCCGGAAGGAACGTGACCGAAAGAA
AGGCTCCCTAGAGGGTTATCTGGGAGCCTCGGAAAGTGAGCAACGACTCC
GCCGACAGAGGAAGATGTGGTGGACGGTCAACGGCATTGCCGCGGTGGGA
GCATCCATATGGCTTGCAGGTGCCCTGGGAATCATCGGGCGTACGGGGCA
GGGTTATGGCTGGGAGGCCAAGGGATGGAATGAGATCTACAGCCAGGTCC
CCGTTATTGGGTCCTGGCTCTGAATGGCTGCCTCGAAAGAAAGCATGCCA
TCCAAACCAGAGGATATCGAAACGCGCTCCATATTTTCAATGCAAGAGTT
AGACCCATCACCAGTACAAGATGAGTTTCCAGACCTTGAATCTGGTGACT
ACTTCCCCAGAGAACCAAGTCCGCCATCGGCACGCGAGCCCATCGCCGGG
GGTGGTCGGTTCTCGTCGCTCAAGTTAGGCCTTCGCGGACATAGTTGGGA
TTCCTGGTTATCTGCGTTCCAACGATACTCGACGTATCCACCGACCCTAT
TCTTTGCATTGCATTGGGCCAATACCTCTCTCATCCCTCTGGCTACTCGA
TCTGTGCCCGACAGCGAGAGCTTCCTGCTTCTCACCAGACCCGTCTATCA
ATCTCCGGGCCTCGAACATCTCGTTCTGACCGCGCCTGTTCTGATTCATA
TTGCGTCTGGAATTGCTTTGCGCAACATCCGCTCCGCACGGCGGGCTCGA
CTCTATGGCGCCGAGACAAGGTCACAGAGACACTCCTTGACGTTTTGGCC
TCGGATGAGCCTCCAAGCTCGGTTAGGATATTCCTTAGTTCCGTTACTCG
GCGTCCATGTGCTCGTCAACCGCATCACTCCGTTGATGGTTGATGGGGGA
AGCTCGGGAGTCGGGCTGGGTTATGTGGCCCACGGCTTTGCACGGGCCCC
CGCACTCTGGAATCTGTACTATTTGTTATTCGTCGCCGTTGGGGTGTGGC
ACTTCGTCGGCGGCTGGGCTGCATGGATGGGCTGGAGAGTGACAACGGTC
CGGAAGGAACGTGACCGAAAGAAAGGCTCCCTAGAGGGTTATCTGGGAGC
CTCGGAAAGTGAGCAACGACTCCGCCGACAGAGGAAGATGTGGTGGACGG
TCAACGGCATTGCCGCGGTGGGAGCATCCATATGGCTTGCAGGTGCCCTG
GGAATCATCGGGCGTACGGGGCAGGGTTATGGCTGGGAGGCCAAGGGATG
GAATGAGATCTACAGCCAGGTCCCCGTTATTGGGTCCTGGCTCTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_23410ATCC64974_23410Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_23410-T1.exon1ATCC64974_23410-T1.exon1Aspergillus niger N402exon
ATCC64974_23410-T1.exon2ATCC64974_23410-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_23410-T1.cdsATCC64974_23410-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_23410-T1ATCC64974_23410-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR034804
DBxrefInterPro:IPR012472
DBxrefPFAM:PF07950
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000003.1supercontigOGUI01000003.1:3727038..3728146 +
Powered by Drupal