You are here

Home

ATCC64974_23680-T1, ATCC64974_23680-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_23680-T1
Unique NameATCC64974_23680-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000003.1:3927383..3929265-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_23680-T1 ID=ATCC64974_23680-T1|Name=ATCC64974_23680-T1|organism=Aspergillus niger N402|type=mRNA|length=1883bp|location=Sequence derived from alignment at OGUI01000003.1:3927383..3929265- (Aspergillus niger N402)
ATGGAAGACCCCCAACCGCGAACACGGCGACGGCATCCAGTCGATAAATA
TGGCCCAAAGTTCTATGACAAGTCCGAGCACATGCAGGGTCGGGCTGCCG
CTATGAAGGCTGCTCTGAGTGGTGACGACCCGTCTCGGTCAGAGCCTGCT
GGGGGGTTCGATAGCACTCCGTACCCCTATGCACCACCCGGCTATACACT
GAAGTTCACCTTCCATCGTGGAGTCAACCTTCCTTGCGCAGACTTTGGTA
CATTTTCTTCCGACCCTTATGTTCTCGCCCAATTGATTGTCGACCTACCC
CAACGCCACAAGCAGGACCCCGTTATGTCCTTCCGAACACCAACTGTGCG
CAAAAATCGAGATCCGGAATGGAACAGTGAATGGATCGTTGCCAATGTCC
CGGCCTCGGGTTTCCATCTGAAATGTCATGTGTACGATGAAGACGCTGCG
GACCATGACGACAAACTCGGTAACGCTTATGTCGACGTGGATTCGGTCAA
TGGACAGTGGCCCGGCATAAAGGAGCAGAGCATTCGCCTGAAGAAGCGCA
TGGGCAGCAAGCGGGTCTACTTGTTCGGTAACATCGCTGCGCTGGCGTCG
CGACGTCTAGATGTGCAGTCGCATATAGTAATCAGCGTTCAGTGCTTAGG
GAAGACACCAGGAGATGAAGGGGCTCATATGTATACCATTGGACCAAACT
ACTGGTTCAAGCATTTTTCTCCGCTCATTGGGAGGATAGCCGGCACTAAA
GATAAGGTCCAAAGTCAGCGTGATGAGAAGAAGACCATTACTCGCTATAA
GTTCGTTCCTCGCCCTGCCCTAAAATTTTTGAAGAAAATGATACGCTTAC
AGTCTCTCTGTTCAGTTTTCAGGCAATCCAAATACAGCTCCAGGGCCCTG
TGCCTACCGCGCTCTATCATCGTTATGTCGAATTCAAGCCGTTTGTAGCC
GGGATGTTCACGTCACACAGTCTTCGTGGAAGGATACTCAATCGAGCGCT
GCATCATCAACACGAACGTATCTACAACTTTGACAAGACCACCCTCAGTG
GACAGTTTTCTTCCCCTTGTACCGAGCTCACGCAGAAGTTTCTTGAATTT
GTGCACTACGCTCAGGGCGGGAGGATCTTTACATATGTCATCACCCTAGA
CGGGCAATTGCGCTTCACGGAAACAGGGAAGGAATTCGGAATTGATTTGC
TGAGTAAACACACGATGCATAGTGATGTATCGATTTATATTGCATACTCT
GGTGAGTTCTTCTTGCGTCGCCTGAAGCATCGCCATCCCCGACACCCGGA
AACAATTCAGCATTCGGAAACACACTACTCCGGTGATGAGTCGCTGGTAG
AACCAGAGATATCAACTGATCCGGCCGACTATGAACTTTTCATCGACAAT
GATAGCGGAACTTATCGTCCCAATGGCGAATACCTACCCCTGTTGAAACA
GCTCATCTCCACCAATCTACCAGGTCTTCACGTGACTACACTTGATTGCA
AGAACGATGCAGAGCGGATGGAGGTTCTGAAGAATGAGCAGAGGGAGTTC
AAGAAGAACGAGGGCAATCATATGATCTTCCTCCAGCGCAGCAATAGCTC
TTCGCTTTCTATATCCAGTTCAGATGAAGACGAGTTGAATGAGCGCAGTG
AGTCGCAGCCTCATAATAGGGACGGCTTTGCGCAAAAGGTACACGATATG
CGAGACATGAAGGGTCAAATGATGAAATGGGCCCAGGCAGACAACCACGG
CAATCCAGATGAGACTGAGAGTCGATCTGGGCGTCAGAGGACTGCGGCAG
CGCACAGCTCAGGAGCATCAAACCCCGCCGTGGAGAATGGCTTGGGTGAA
AGCACAGCCACTTTCGCTGACGGCCGAATTTAG
back to top

Coding sequence (CDS) from alignment at OGUI01000003.1:3927383..3929265-

>ATCC64974_23680-T1 ID=ATCC64974_23680-T1|Name=ATCC64974_23680-T1|organism=Aspergillus niger N402|type=CDS|length=3636bp|location=Sequence derived from alignment at OGUI01000003.1:3927383..3929265- (Aspergillus niger N402)
TTTTCAGGCAATCCAAATACAGCTCCAGGGCCCTGTGCCTACCGCGCTCT
ATCATCGTTATGTCGAATTCAAGCCGTTTGTAGCCGGGATGTTCACGTCA
CACAGTCTTCGTGGAAGGATACTCAATCGAGCGCTGCATCATCAACACGA
ACGTATCTACAACTTTGACAAGACCACCCTCAGTGGACAGTTTTCTTCCC
CTTGTACCGAGCTCACGCAGAAGTTTCTTGAATTTGTGCACTACGCTCAG
GGCGGGAGGATCTTTACATATGTCATCACCCTAGACGGGCAATTGCGCTT
CACGGAAACAGGGAAGGAATTCGGAATTGATTTGCTGAGTAAACACACGA
TGCATAGTGATGTATCGATTTATATTGCATACTCTGGTGAGTTCTTCTTG
CGTCGCCTGAAGCATCGCCATCCCCGACACCCGGAAACAATTCAGCATTC
GGAAACACACTACTCCGGTGATGAGTCGCTGGTAGAACCAGAGATATCAA
CTGATCCGGCCGACTATGAACTTTTCATCGACAATGATAGCGGAACTTAT
CGTCCCAATGGCGAATACCTACCCCTGTTGAAACAGCTCATCTCCACCAA
TCTACCAGGTCTTCACGTGACTACACTTGATTGCAAGAACGATGCAGAGC
GGATGGAGGTTCTGAAGAATGAGCAGAGGGAGTTCAAGAAGAACGAGGGC
AATCATATGATCTTCCTCCAGCGCAGCAATAGCTCTTCGCTTTCTATATC
CAGTTCAGATGAAGACGAGTTGAATGAGCGCAGTGAGTCGCAGCCTCATA
ATAGGGACGGCTTTGCGCAAAAGGTACACGATATGCGAGACATGAAGGGT
CAAATGATGAAATGGGCCCAGGCAGACAACCACGGCAATCCAGATGAGAC
TGAGAGTCGATCTGGGCGTCAGAGGACTGCGGCAGCGCACAGCTCAGGAG
CATCAAACCCCGCCGTGGAGAATGGCTTGGGTGAAAGCACAGCCACTTTC
GCTGACGGCCGAATTTAGATGGAAGACCCCCAACCGCGAACACGGCGACG
GCATCCAGTCGATAAATATGGCCCAAAGTTCTATGACAAGTCCGAGCACA
TGCAGGGTCGGGCTGCCGCTATGAAGGCTGCTCTGAGTGGTGACGACCCG
TCTCGGTCAGAGCCTGCTGGGGGGTTCGATAGCACTCCGTACCCCTATGC
ACCACCCGGCTATACACTGAAGTTCACCTTCCATCGTGGAGTCAACCTTC
CTTGCGCAGACTTTGGTACATTTTCTTCCGACCCTTATGTTCTCGCCCAA
TTGATTGTCGACCTACCCCAACGCCACAAGCAGGACCCCGTTATGTCCTT
CCGAACACCAACTGTGCGCAAAAATCGAGATCCGGAATGGAACAGTGAAT
GGATCGTTGCCAATGTCCCGGCCTCGGGTTTCCATCTGAAATGTCATGTG
TACGATGAAGACGCTGCGGACCATGACGACAAACTCGGTAACGCTTATGT
CGACGTGGATTCGGTCAATGGACAGTGGCCCGGCATAAAGGAGCAGAGCA
TTCGCCTGAAGAAGCGCATGGGCAGCAAGCGGGTCTACTTGTTCGGTAAC
ATCGCTGCGCTGGCGTCGCGACGTCTAGATGTGCAGTCGCATATAGTAAT
CAGCGTTCAGTGCTTAGGGAAGACACCAGGAGATGAAGGGGCTCATATGT
ATACCATTGGACCAAACTACTGGTTCAAGCATTTTTCTCCGCTCATTGGG
AGGATAGCCGGCACTAAAGATAAGGTCCAAAGTCAGCGTGATGAGAAGAA
GACCATTACTCGCTATAATTTTCAGGCAATCCAAATACAGCTCCAGGGCC
CTGTGCCTACCGCGCTCTATCATCGTTATGTCGAATTCAAGCCGTTTGTA
GCCGGGATGTTCACGTCACACAGTCTTCGTGGAAGGATACTCAATCGAGC
GCTGCATCATCAACACGAACGTATCTACAACTTTGACAAGACCACCCTCA
GTGGACAGTTTTCTTCCCCTTGTACCGAGCTCACGCAGAAGTTTCTTGAA
TTTGTGCACTACGCTCAGGGCGGGAGGATCTTTACATATGTCATCACCCT
AGACGGGCAATTGCGCTTCACGGAAACAGGGAAGGAATTCGGAATTGATT
TGCTGAGTAAACACACGATGCATAGTGATGTATCGATTTATATTGCATAC
TCTGGTGAGTTCTTCTTGCGTCGCCTGAAGCATCGCCATCCCCGACACCC
GGAAACAATTCAGCATTCGGAAACACACTACTCCGGTGATGAGTCGCTGG
TAGAACCAGAGATATCAACTGATCCGGCCGACTATGAACTTTTCATCGAC
AATGATAGCGGAACTTATCGTCCCAATGGCGAATACCTACCCCTGTTGAA
ACAGCTCATCTCCACCAATCTACCAGGTCTTCACGTGACTACACTTGATT
GCAAGAACGATGCAGAGCGGATGGAGGTTCTGAAGAATGAGCAGAGGGAG
TTCAAGAAGAACGAGGGCAATCATATGATCTTCCTCCAGCGCAGCAATAG
CTCTTCGCTTTCTATATCCAGTTCAGATGAAGACGAGTTGAATGAGCGCA
GTGAGTCGCAGCCTCATAATAGGGACGGCTTTGCGCAAAAGGTACACGAT
ATGCGAGACATGAAGGGTCAAATGATGAAATGGGCCCAGGCAGACAACCA
CGGCAATCCAGATGAGACTGAGAGTCGATCTGGGCGTCAGAGGACTGCGG
CAGCGCACAGCTCAGGAGCATCAAACCCCGCCGTGGAGAATGGCTTGGGT
GAAAGCACAGCCACTTTCGCTGACGGCCGAATTTAGATGGAAGACCCCCA
ACCGCGAACACGGCGACGGCATCCAGTCGATAAATATGGCCCAAAGTTCT
ATGACAAGTCCGAGCACATGCAGGGTCGGGCTGCCGCTATGAAGGCTGCT
CTGAGTGGTGACGACCCGTCTCGGTCAGAGCCTGCTGGGGGGTTCGATAG
CACTCCGTACCCCTATGCACCACCCGGCTATACACTGAAGTTCACCTTCC
ATCGTGGAGTCAACCTTCCTTGCGCAGACTTTGGTACATTTTCTTCCGAC
CCTTATGTTCTCGCCCAATTGATTGTCGACCTACCCCAACGCCACAAGCA
GGACCCCGTTATGTCCTTCCGAACACCAACTGTGCGCAAAAATCGAGATC
CGGAATGGAACAGTGAATGGATCGTTGCCAATGTCCCGGCCTCGGGTTTC
CATCTGAAATGTCATGTGTACGATGAAGACGCTGCGGACCATGACGACAA
ACTCGGTAACGCTTATGTCGACGTGGATTCGGTCAATGGACAGTGGCCCG
GCATAAAGGAGCAGAGCATTCGCCTGAAGAAGCGCATGGGCAGCAAGCGG
GTCTACTTGTTCGGTAACATCGCTGCGCTGGCGTCGCGACGTCTAGATGT
GCAGTCGCATATAGTAATCAGCGTTCAGTGCTTAGGGAAGACACCAGGAG
ATGAAGGGGCTCATATGTATACCATTGGACCAAACTACTGGTTCAAGCAT
TTTTCTCCGCTCATTGGGAGGATAGCCGGCACTAAAGATAAGGTCCAAAG
TCAGCGTGATGAGAAGAAGACCATTACTCGCTATAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_23680ATCC64974_23680Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_23680-T1ATCC64974_23680-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_23680-T1.cdsATCC64974_23680-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_23680-T1.exon2ATCC64974_23680-T1.exon2Aspergillus niger N402exon
ATCC64974_23680-T1.exon1ATCC64974_23680-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR035892
DBxrefInterPro:IPR000008
DBxrefPFAM:PF00168
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000003.1supercontigOGUI01000003.1:3927383..3929265 -
Powered by Drupal