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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000003.1:3966499..3968421+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_23770-T1 ID=ATCC64974_23770-T1|Name=ATCC64974_23770-T1|organism=Aspergillus niger N402|type=mRNA|length=1923bp|location=Sequence derived from alignment at OGUI01000003.1:3966499..3968421+ (Aspergillus niger N402)
ATGGCTGCGTTGATGCAATCGAACAACGAACCCGTTACTATCTCAAAACC
ATTGTCTGGGACATCGAACCCCGTAATATCTGCTCCATCGGAACCCCTCG
CTTTCCTAAAACAGTCGAAACCTGATTCAAGCCTGTCCTCTATCGCCAGC
GCTGGACTGAACGTCTCGCGCTCCGGAGATTCGCTGCCACCAATGACGAC
GACCGCGCCGCCGGCCACGGCTGGCCAGACAGACCGCCCGCTGGAGCATG
AGAAGGAGTCGGAACAGCACAGCTCACAAGTCGCGAGAGAGGCCCTCGGT
GCCAGCGAGAAGCAGACAAATCCCGTGAACGAAGGCATGCAAACTTCTTC
AGACCAAATGCAAGTTGATTCACATTCGGGCCCGGGCAATGCGTCTGATA
CGTTTGGGGCAGCCGATAACAACAACACACTTATCGATGCCTCAACCGTA
GCTAGTCCAGGTCCTATCGAGGATTCTGGCTCTGCAGATGGCGATCACCC
TCGCCACCGTGATGAAGGAGAAATGCCGCAAGAAACAGGCAACAAAGCCT
TCTCGTATCCGATGCCCACGGCCAGTTTTAATGACCCCCGTCGTGGTCTC
AGCTTACCTGGCTCTGGTTTTCACAAGGGCCAGCGATCACCGTCGGCCAA
AAAGCATCGTTGCCCATACTGTGCCACGGAGTTTACAAGGCATCATAATC
TGAAGAGCCATCTGCTTACGCATAGTCAGGAAAAGCCATACGTTTGCCAA
ACATGTCAATCGCGCTTCCGTCGGTTGCATGATCTAAAGAGACATACAAA
GCTTCATACTGGCGAAAGGCCCCATATTTGCCCTAAGTGCGGGCGCAGGT
TCGCCCGTGGCGACGCTCTAGCTCGCCACAACAAGGGCCAAGGCGGATGC
GCGGGGCGCAGAGCAAGCATGGGAAGCTACGTTCCCGAGGATGAATATGG
CGAGGCTCCGGCTCCTGGAGCCGCGGATGATACGATGGATGGACTTGTGT
ACACAGCTGAGCCAGAGCGCATGGATGAGGAAGAAGAGCGGCGACTCATG
CCCAGCATCAAGAAGCATGATATGTCGACGGACTCCATTTCACGTTCGAA
CACTACGAGCTATCAACCGCGCCAGCCCAGCACATATCCTCCGATCGCTT
CAGGCAGACCTTCCCCCGGGGGTCTCTTCCCTCCTCCAAGCCATGGTGGC
TCTAGTGCATCAACGTCTCCCGTATCGCAATCCGGAAACATGACATTCCC
ACCGCCTGGTCAACCGTCAGGTGCATCCGTTTTCCCTACAAATATCACGG
GGAGCCCGAAGCCATTATCGCCAAATGCACTGTCATCGCATCAGCTTGGC
CATGGCCCGGAGAATAATATCCATCATCGTGCTCATTCGCCTGGTATGGC
TCAGTCGTTCCAGCAGCAGACATTCGGCAGGACAGGATCTTCCTCAAGTT
CCGTAACGAATCATGCTGCTTCAGGCTTGGGTCTGCCTCCACCGCAACCG
GGTGCTCCCCAGCTCCCGCCGCCCCCGGGGATGAACTCGGCTGAATCTCG
GTTTAGCCTTCACTCTCAAGGATCAGTGCCACCGGCGCCTTCGACGGCTA
CCAAACACATGACCCCTCACAATCACACAAATAACCACGGTGGTCCACTA
CCGTCGAAACCTGGATCGGAAGGGGCCTCGAATAATGGCACCCAGATCAC
TGGTCCTCATGAGTCCAATCTCATCGAGCAGTTCCGTGAGCGGGAAGACA
AGCTGTGGGCTTATGTCCGCTCGGTGCACGAAGAATTAAATGGACTTCGG
ACGGAAGTTGCCGCTCTAAGGGCCCAACTTGCATCAGCTAACGTCAACGC
GCTAGCAATGTCAAGCCAAAGTGCACCTCAGTCTCAACCCGAGACAAACG
CTGCTGGTACATCCCAACGGTGA back to topCoding sequence (CDS) from alignment at OGUI01000003.1:3966499..3968421+ >ATCC64974_23770-T1 ID=ATCC64974_23770-T1|Name=ATCC64974_23770-T1|organism=Aspergillus niger N402|type=CDS|length=1923bp|location=Sequence derived from alignment at OGUI01000003.1:3966499..3968421+ (Aspergillus niger N402)
ATGGCTGCGTTGATGCAATCGAACAACGAACCCGTTACTATCTCAAAACC
ATTGTCTGGGACATCGAACCCCGTAATATCTGCTCCATCGGAACCCCTCG
CTTTCCTAAAACAGTCGAAACCTGATTCAAGCCTGTCCTCTATCGCCAGC
GCTGGACTGAACGTCTCGCGCTCCGGAGATTCGCTGCCACCAATGACGAC
GACCGCGCCGCCGGCCACGGCTGGCCAGACAGACCGCCCGCTGGAGCATG
AGAAGGAGTCGGAACAGCACAGCTCACAAGTCGCGAGAGAGGCCCTCGGT
GCCAGCGAGAAGCAGACAAATCCCGTGAACGAAGGCATGCAAACTTCTTC
AGACCAAATGCAAGTTGATTCACATTCGGGCCCGGGCAATGCGTCTGATA
CGTTTGGGGCAGCCGATAACAACAACACACTTATCGATGCCTCAACCGTA
GCTAGTCCAGGTCCTATCGAGGATTCTGGCTCTGCAGATGGCGATCACCC
TCGCCACCGTGATGAAGGAGAAATGCCGCAAGAAACAGGCAACAAAGCCT
TCTCGTATCCGATGCCCACGGCCAGTTTTAATGACCCCCGTCGTGGTCTC
AGCTTACCTGGCTCTGGTTTTCACAAGGGCCAGCGATCACCGTCGGCCAA
AAAGCATCGTTGCCCATACTGTGCCACGGAGTTTACAAGGCATCATAATC
TGAAGAGCCATCTGCTTACGCATAGTCAGGAAAAGCCATACGTTTGCCAA
ACATGTCAATCGCGCTTCCGTCGGTTGCATGATCTAAAGAGACATACAAA
GCTTCATACTGGCGAAAGGCCCCATATTTGCCCTAAGTGCGGGCGCAGGT
TCGCCCGTGGCGACGCTCTAGCTCGCCACAACAAGGGCCAAGGCGGATGC
GCGGGGCGCAGAGCAAGCATGGGAAGCTACGTTCCCGAGGATGAATATGG
CGAGGCTCCGGCTCCTGGAGCCGCGGATGATACGATGGATGGACTTGTGT
ACACAGCTGAGCCAGAGCGCATGGATGAGGAAGAAGAGCGGCGACTCATG
CCCAGCATCAAGAAGCATGATATGTCGACGGACTCCATTTCACGTTCGAA
CACTACGAGCTATCAACCGCGCCAGCCCAGCACATATCCTCCGATCGCTT
CAGGCAGACCTTCCCCCGGGGGTCTCTTCCCTCCTCCAAGCCATGGTGGC
TCTAGTGCATCAACGTCTCCCGTATCGCAATCCGGAAACATGACATTCCC
ACCGCCTGGTCAACCGTCAGGTGCATCCGTTTTCCCTACAAATATCACGG
GGAGCCCGAAGCCATTATCGCCAAATGCACTGTCATCGCATCAGCTTGGC
CATGGCCCGGAGAATAATATCCATCATCGTGCTCATTCGCCTGGTATGGC
TCAGTCGTTCCAGCAGCAGACATTCGGCAGGACAGGATCTTCCTCAAGTT
CCGTAACGAATCATGCTGCTTCAGGCTTGGGTCTGCCTCCACCGCAACCG
GGTGCTCCCCAGCTCCCGCCGCCCCCGGGGATGAACTCGGCTGAATCTCG
GTTTAGCCTTCACTCTCAAGGATCAGTGCCACCGGCGCCTTCGACGGCTA
CCAAACACATGACCCCTCACAATCACACAAATAACCACGGTGGTCCACTA
CCGTCGAAACCTGGATCGGAAGGGGCCTCGAATAATGGCACCCAGATCAC
TGGTCCTCATGAGTCCAATCTCATCGAGCAGTTCCGTGAGCGGGAAGACA
AGCTGTGGGCTTATGTCCGCTCGGTGCACGAAGAATTAAATGGACTTCGG
ACGGAAGTTGCCGCTCTAAGGGCCCAACTTGCATCAGCTAACGTCAACGC
GCTAGCAATGTCAAGCCAAAGTGCACCTCAGTCTCAACCCGAGACAAACG
CTGCTGGTACATCCCAACGGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_23770-T1 | ATCC64974_23770-T1-protein | Aspergillus niger N402 | polypeptide |
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036236 |
| DBxref | InterPro:IPR013087 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000003.1 | supercontig | OGUI01000003.1:3966499..3968421 + |
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