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ATCC64974_2380-T1, ATCC64974_2380-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_2380-T1
Unique NameATCC64974_2380-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000001.1:747787..748622-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_2380-T1 ID=ATCC64974_2380-T1|Name=ATCC64974_2380-T1|organism=Aspergillus niger N402|type=mRNA|length=836bp|location=Sequence derived from alignment at OGUI01000001.1:747787..748622- (Aspergillus niger N402)
ATGAAGCTCCCCGTGTCACTTGCTATGCTTGCGGCCACCGCCATGGGCCA
GACGATGTGCTCTCAATATGACAGTGCCTCGAGCCCCCCGTATTCAGTGA
ACCAGAACCTCTGGGGCGAGTACCAAGGCACCGGCAGCCAGTGTGTATAT
GTCGACAAACTCTCCAGCAGTGGTGCATCCTGGCACACCGAATGGACCTG
GAGCGGTGGTGAGGGAACAGTGAAAAGCTACTCTAACTCTGGCGTTACAT
TTAACAAGAAGCTCGTGAGTGATGTATCAAGCATCCCCACCTCGGTGGAA
TGGAAGCAGGACAACACCAACGTCAACGCCGATGTCGCGTATGATCTTTT
CACCGCGGCGAATGTGGACCATGCCACTTCTAGCGGCGACTATGAACTGA
TGATTTGGTATGTGAGCTCTCAAAGGATCAAAGAATACAGAAATCTAACA
ACGCCAGGCTTGCCCGCTACGGCAACATCCAGCCCATTGGCAAGCAAATT
GCCACGGCCACAGTGGGAGGCAAGTCCTGGGAGGTGTGGTATGGCAGCAC
CACCCAGGCCGGTGCGGAGCAGAGGACATACAGCTTCGTGTCAGAAAGCC
CTATCAACTCATACAGTGGGGACATCAATGCATTTTTCAGCTATCTCACT
CAGAACCAAGGCTTTCCCGCCAGCTCTCAGTACTTGATCAGTAAGATTCC
CTGATTCTACCAGCGGACGCCGCAGCGAAACAGTCACTAACAGAAGTGAT
GTGTAGATCTGCAGTTTGGAACTGAGGCGTTCACCGGGGGCCCGGCAACC
TTCACGGTTGACAACTGGACCGCCAGTGTCAACTAG
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Coding sequence (CDS) from alignment at OGUI01000001.1:747787..748622-

>ATCC64974_2380-T1 ID=ATCC64974_2380-T1|Name=ATCC64974_2380-T1|organism=Aspergillus niger N402|type=CDS|length=2160bp|location=Sequence derived from alignment at OGUI01000001.1:747787..748622- (Aspergillus niger N402)
ATCTGCAGTTTGGAACTGAGGCGTTCACCGGGGGCCCGGCAACCTTCACG
GTTGACAACTGGACCGCCAGTGTCAACTAGGCTTGCCCGCTACGGCAACA
TCCAGCCCATTGGCAAGCAAATTGCCACGGCCACAGTGGGAGGCAAGTCC
TGGGAGGTGTGGTATGGCAGCACCACCCAGGCCGGTGCGGAGCAGAGGAC
ATACAGCTTCGTGTCAGAAAGCCCTATCAACTCATACAGTGGGGACATCA
ATGCATTTTTCAGCTATCTCACTCAGAACCAAGGCTTTCCCGCCAGCTCT
CAGTACTTGATCAATGAAGCTCCCCGTGTCACTTGCTATGCTTGCGGCCA
CCGCCATGGGCCAGACGATGTGCTCTCAATATGACAGTGCCTCGAGCCCC
CCGTATTCAGTGAACCAGAACCTCTGGGGCGAGTACCAAGGCACCGGCAG
CCAGTGTGTATATGTCGACAAACTCTCCAGCAGTGGTGCATCCTGGCACA
CCGAATGGACCTGGAGCGGTGGTGAGGGAACAGTGAAAAGCTACTCTAAC
TCTGGCGTTACATTTAACAAGAAGCTCGTGAGTGATGTATCAAGCATCCC
CACCTCGGTGGAATGGAAGCAGGACAACACCAACGTCAACGCCGATGTCG
CGTATGATCTTTTCACCGCGGCGAATGTGGACCATGCCACTTCTAGCGGC
GACTATGAACTGATGATTTGATCTGCAGTTTGGAACTGAGGCGTTCACCG
GGGGCCCGGCAACCTTCACGGTTGACAACTGGACCGCCAGTGTCAACTAG
GCTTGCCCGCTACGGCAACATCCAGCCCATTGGCAAGCAAATTGCCACGG
CCACAGTGGGAGGCAAGTCCTGGGAGGTGTGGTATGGCAGCACCACCCAG
GCCGGTGCGGAGCAGAGGACATACAGCTTCGTGTCAGAAAGCCCTATCAA
CTCATACAGTGGGGACATCAATGCATTTTTCAGCTATCTCACTCAGAACC
AAGGCTTTCCCGCCAGCTCTCAGTACTTGATCAATGAAGCTCCCCGTGTC
ACTTGCTATGCTTGCGGCCACCGCCATGGGCCAGACGATGTGCTCTCAAT
ATGACAGTGCCTCGAGCCCCCCGTATTCAGTGAACCAGAACCTCTGGGGC
GAGTACCAAGGCACCGGCAGCCAGTGTGTATATGTCGACAAACTCTCCAG
CAGTGGTGCATCCTGGCACACCGAATGGACCTGGAGCGGTGGTGAGGGAA
CAGTGAAAAGCTACTCTAACTCTGGCGTTACATTTAACAAGAAGCTCGTG
AGTGATGTATCAAGCATCCCCACCTCGGTGGAATGGAAGCAGGACAACAC
CAACGTCAACGCCGATGTCGCGTATGATCTTTTCACCGCGGCGAATGTGG
ACCATGCCACTTCTAGCGGCGACTATGAACTGATGATTTGATCTGCAGTT
TGGAACTGAGGCGTTCACCGGGGGCCCGGCAACCTTCACGGTTGACAACT
GGACCGCCAGTGTCAACTAGGCTTGCCCGCTACGGCAACATCCAGCCCAT
TGGCAAGCAAATTGCCACGGCCACAGTGGGAGGCAAGTCCTGGGAGGTGT
GGTATGGCAGCACCACCCAGGCCGGTGCGGAGCAGAGGACATACAGCTTC
GTGTCAGAAAGCCCTATCAACTCATACAGTGGGGACATCAATGCATTTTT
CAGCTATCTCACTCAGAACCAAGGCTTTCCCGCCAGCTCTCAGTACTTGA
TCAATGAAGCTCCCCGTGTCACTTGCTATGCTTGCGGCCACCGCCATGGG
CCAGACGATGTGCTCTCAATATGACAGTGCCTCGAGCCCCCCGTATTCAG
TGAACCAGAACCTCTGGGGCGAGTACCAAGGCACCGGCAGCCAGTGTGTA
TATGTCGACAAACTCTCCAGCAGTGGTGCATCCTGGCACACCGAATGGAC
CTGGAGCGGTGGTGAGGGAACAGTGAAAAGCTACTCTAACTCTGGCGTTA
CATTTAACAAGAAGCTCGTGAGTGATGTATCAAGCATCCCCACCTCGGTG
GAATGGAAGCAGGACAACACCAACGTCAACGCCGATGTCGCGTATGATCT
TTTCACCGCGGCGAATGTGGACCATGCCACTTCTAGCGGCGACTATGAAC
TGATGATTTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0000272polysaccharide catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0008810cellulase activity
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_2380ATCC64974_2380Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_2380-T1ATCC64974_2380-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_2380-T1.cdsATCC64974_2380-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_2380-T1.exon3ATCC64974_2380-T1.exon3Aspergillus niger N402exon
ATCC64974_2380-T1.exon2ATCC64974_2380-T1.exon2Aspergillus niger N402exon
ATCC64974_2380-T1.exon1ATCC64974_2380-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteSECRETED:SignalP(1-16)
DBxrefInterPro:IPR013320
DBxrefInterPro:IPR002594
DBxrefInterPro:IPR013319
DBxrefPFAM:PF01670
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000001.1supercontigOGUI01000001.1:747787..748622 -
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