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ATCC64974_24070-T1, ATCC64974_24070-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_24070-T1
Unique NameATCC64974_24070-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000003.1:4042257..4044452-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_24070-T1 ID=ATCC64974_24070-T1|Name=ATCC64974_24070-T1|organism=Aspergillus niger N402|type=mRNA|length=2196bp|location=Sequence derived from alignment at OGUI01000003.1:4042257..4044452- (Aspergillus niger N402)
ATGCCACCCAAACGCCGACTACGAAAGAATACGGCCGCGATAGCCATACA
AGAGAGCGGATACATCGGTTCCCCATCAATGGAGGATACAAGGAATCTTG
TCCCACTTGCCTCCGCCCCGGCAAAGCATCTCCCTCTTGACGCCCACAAT
GGCTCCTGTGAAACCGGCTCGTTGACCCCAGTCCGCTTCAACTGTCAAGC
CTGTGTGCGCAAGAAGATCAAATGCAACCGCGCGGTGCCCAAGTGTGCCA
ACTGCATCAAGACCAAGCTCGAGTGTGTCTACCAGCCACCGCCGCCACGA
CGCAAGAGGAAACGTAGCCAGGGCGAGGAAGATGTACATGAACGTCTGGC
ACGTTACGAGCGCATCTTGCACGACCACAATCTTCTTCCGACAGCCACCC
CCTCGGTTATCAGCGGAAGAGACTTGGAGGCCTCAGCAAATAGTATACAG
GGACAGACTCCAGGGACAGCGAACTCGCAGGCTGACGTTGCAGCCAATAA
ACTGCTTCCCAAGTATGGCAATTCTCGCCACATTGACGATGTTCTGCTCC
TCGACGCTGGCGAAGGTGACCTGGGTGAGTTGTCCGTGTCCGAGTCCGAG
CAACAGAACCATCATGAAGATGAGCCTGGTCCCGACAAAGCCACTCCAAC
CGGTCTTCTTGGTGCCCTTGCCGCGCATTCCATCTCGGATGCAAGTACGA
GAAGCGCGATAAGCCTCACCGACCTTCACCCTAGCTGTGAGCATGCGGCT
AAGCTCTGGTATGCCTACGTGGAGAACGTCGAGCCTCTTTGCAAGGTTCT
TCATGTTCCGACTGTCGCCAGGATAGTCCACACCGTCTCCAAGCACCCAG
CGACTGCCTCCAAGAACGATGAATGCATACTGTTTGCCATTTACCATTTC
GCCGTATTTTCAATGTCCGATGACGAGTGTTCACATGAACTCCATGATTC
CAGGGCCCAGCTGATGCACAAATATCGGACCGCAGTCACTCAGGCATTGG
TAAATGCCTCTTGGCTCAAGACAACCTCGTTGCCGGTTTTACAGGCTTAC
ACTCTCTTCCTTATCTCCTTGCGCACTCAAATCGATTCTCATACATTCTG
GATTTTGACTGGGATTGCAATTCGCCTGGCCCAGCGCATAGGATTGCATC
GGGACGGCGAAAGCGTCGGATTGCCCCCATTTGAGGTCCAGATGCGCCGG
CGGCTCTTTTGGCAGCTGCTACCCTTGGACAGCTACGCAGGTCAAACATC
CGGCACGGGTATATCCATCTCACCAGACAGCTGGGATACTAAGCAACCGC
TAAACATTAACGATGACCAGATGTTCCCCGGCATGAACGAGCCGCCTCAT
GAAAAACGAGGCGCATCAGAGATGATATTTTGCTTGGCTCGGATGGAGCT
GTCAAATTTCTACACTCGAACCGGGGTCCAGCTGAAGGGGAACGGGGGTA
CAATCGAGTTCCGGACCCCCGAGGAGATCGAGCGACTGATTGACGAGGTG
GAAGACCTCATCGAGAAGAAGTTCTTGCGGTACTGCGACATCTTGAACCC
CTTACACTTTCTGACCACCGGCGTTATGCGATCCGCCATTAGTGCTGTCC
GGTTACGCGCGCGGATGCCGCTGCTCAAGCAAGAAACTATAACCGACACA
CAGCAGAGACACCTCTGCACCCTTGCCGAAAAGGTCCTCGACACCAGAAA
TGTCATGTATAGTAATCCCGCGACTCAAAAGTTCCGCTGGCAGATGCAAG
CGTTTTTCGTGTGGGATTCCCTCCTTTGTATTCTGAGAAGCATTGCGAAG
GTTGGATTTTATTCGCCATCAGAGCTTGATGCTGCCTGGAAAAGGGTTTC
AGAGGTCTACGCGAATCACGAAGCACTGCGTCAGGGCCGAAGGACCTTGT
ATGCTACGATTGCTAAGATCACTTTGAAGGCCTGGTTACTAAACCCGCCT
CGTAATTCAACTCCCGAACCGGATTTTATGACCGCGCTGCGCGCTCAACA
CAAGCCCAAAGAGATCGACCAGCGGCATGACAGTACGTTTGCTGCCCATC
AAGCTACAGATGGGGCTTTTTCTTTCGATGAGCTTTTCGACGATATGAGC
AGGGCTGATCCCAATATGAACAATGCCTTCAATCTCGACCCTTCTGCCGA
TTGGCTATTCTGGGACCAAATGTGTGGAGAAACCAGCCTTGGTTGA
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Coding sequence (CDS) from alignment at OGUI01000003.1:4042257..4044452-

>ATCC64974_24070-T1 ID=ATCC64974_24070-T1|Name=ATCC64974_24070-T1|organism=Aspergillus niger N402|type=CDS|length=2196bp|location=Sequence derived from alignment at OGUI01000003.1:4042257..4044452- (Aspergillus niger N402)
ATGCCACCCAAACGCCGACTACGAAAGAATACGGCCGCGATAGCCATACA
AGAGAGCGGATACATCGGTTCCCCATCAATGGAGGATACAAGGAATCTTG
TCCCACTTGCCTCCGCCCCGGCAAAGCATCTCCCTCTTGACGCCCACAAT
GGCTCCTGTGAAACCGGCTCGTTGACCCCAGTCCGCTTCAACTGTCAAGC
CTGTGTGCGCAAGAAGATCAAATGCAACCGCGCGGTGCCCAAGTGTGCCA
ACTGCATCAAGACCAAGCTCGAGTGTGTCTACCAGCCACCGCCGCCACGA
CGCAAGAGGAAACGTAGCCAGGGCGAGGAAGATGTACATGAACGTCTGGC
ACGTTACGAGCGCATCTTGCACGACCACAATCTTCTTCCGACAGCCACCC
CCTCGGTTATCAGCGGAAGAGACTTGGAGGCCTCAGCAAATAGTATACAG
GGACAGACTCCAGGGACAGCGAACTCGCAGGCTGACGTTGCAGCCAATAA
ACTGCTTCCCAAGTATGGCAATTCTCGCCACATTGACGATGTTCTGCTCC
TCGACGCTGGCGAAGGTGACCTGGGTGAGTTGTCCGTGTCCGAGTCCGAG
CAACAGAACCATCATGAAGATGAGCCTGGTCCCGACAAAGCCACTCCAAC
CGGTCTTCTTGGTGCCCTTGCCGCGCATTCCATCTCGGATGCAAGTACGA
GAAGCGCGATAAGCCTCACCGACCTTCACCCTAGCTGTGAGCATGCGGCT
AAGCTCTGGTATGCCTACGTGGAGAACGTCGAGCCTCTTTGCAAGGTTCT
TCATGTTCCGACTGTCGCCAGGATAGTCCACACCGTCTCCAAGCACCCAG
CGACTGCCTCCAAGAACGATGAATGCATACTGTTTGCCATTTACCATTTC
GCCGTATTTTCAATGTCCGATGACGAGTGTTCACATGAACTCCATGATTC
CAGGGCCCAGCTGATGCACAAATATCGGACCGCAGTCACTCAGGCATTGG
TAAATGCCTCTTGGCTCAAGACAACCTCGTTGCCGGTTTTACAGGCTTAC
ACTCTCTTCCTTATCTCCTTGCGCACTCAAATCGATTCTCATACATTCTG
GATTTTGACTGGGATTGCAATTCGCCTGGCCCAGCGCATAGGATTGCATC
GGGACGGCGAAAGCGTCGGATTGCCCCCATTTGAGGTCCAGATGCGCCGG
CGGCTCTTTTGGCAGCTGCTACCCTTGGACAGCTACGCAGGTCAAACATC
CGGCACGGGTATATCCATCTCACCAGACAGCTGGGATACTAAGCAACCGC
TAAACATTAACGATGACCAGATGTTCCCCGGCATGAACGAGCCGCCTCAT
GAAAAACGAGGCGCATCAGAGATGATATTTTGCTTGGCTCGGATGGAGCT
GTCAAATTTCTACACTCGAACCGGGGTCCAGCTGAAGGGGAACGGGGGTA
CAATCGAGTTCCGGACCCCCGAGGAGATCGAGCGACTGATTGACGAGGTG
GAAGACCTCATCGAGAAGAAGTTCTTGCGGTACTGCGACATCTTGAACCC
CTTACACTTTCTGACCACCGGCGTTATGCGATCCGCCATTAGTGCTGTCC
GGTTACGCGCGCGGATGCCGCTGCTCAAGCAAGAAACTATAACCGACACA
CAGCAGAGACACCTCTGCACCCTTGCCGAAAAGGTCCTCGACACCAGAAA
TGTCATGTATAGTAATCCCGCGACTCAAAAGTTCCGCTGGCAGATGCAAG
CGTTTTTCGTGTGGGATTCCCTCCTTTGTATTCTGAGAAGCATTGCGAAG
GTTGGATTTTATTCGCCATCAGAGCTTGATGCTGCCTGGAAAAGGGTTTC
AGAGGTCTACGCGAATCACGAAGCACTGCGTCAGGGCCGAAGGACCTTGT
ATGCTACGATTGCTAAGATCACTTTGAAGGCCTGGTTACTAAACCCGCCT
CGTAATTCAACTCCCGAACCGGATTTTATGACCGCGCTGCGCGCTCAACA
CAAGCCCAAAGAGATCGACCAGCGGCATGACAGTACGTTTGCTGCCCATC
AAGCTACAGATGGGGCTTTTTCTTTCGATGAGCTTTTCGACGATATGAGC
AGGGCTGATCCCAATATGAACAATGCCTTCAATCTCGACCCTTCTGCCGA
TTGGCTATTCTGGGACCAAATGTGTGGAGAAACCAGCCTTGGTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270zinc ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
VRTR1ATCC64974_24070Aspergillus niger N402gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_24070-T1.cdsATCC64974_24070-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_24070-T1.exon1ATCC64974_24070-T1.exon1Aspergillus niger N402exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_24070-T1ATCC64974_24070-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR007219
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
DBxrefPFAM:PF04082
ProductTranscription factor vrtR1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000003.1supercontigOGUI01000003.1:4042257..4044452 -
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