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ATCC64974_24240-T1, ATCC64974_24240-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_24240-T1
Unique NameATCC64974_24240-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000003.1:4088646..4090039+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_24240-T1 ID=ATCC64974_24240-T1|Name=ATCC64974_24240-T1|organism=Aspergillus niger N402|type=mRNA|length=1394bp|location=Sequence derived from alignment at OGUI01000003.1:4088646..4090039+ (Aspergillus niger N402)
ATGGGTTCTACCGGACAATTTCCCCGCATCAAAGAGATCCGCACCTTCAT
CATTGATGGTGTGGGATCCGGAGGTGATTATCATAATGTATGCTCAGCAG
CGCCCGGATAATGATGAGCAGATCGCTAAATTTCTCCATTTCAACAGGTC
AAAGGAGGTCACTGGTTGATTGACAGTAACATCTCCACCCCCATGACTCG
CTGGGCACAATACCGTGGCTCTCGCACATCATGGGGTATTAACGTCCTGG
GCTCTTTCTGCGTCGAGATTGAAGCTACCGACGGGACTAAGGGATTTGCC
ACGGGATTCGGTGGTCCCCCAGCTTGTTGGCTGGTCCATCAACACTTTGA
GCGCTTCCTGCTTGGTGCTGGTATGAGCTATCAATATATCAGTCTACTGA
GAATGAGCCAGGCTAATTTGTATCTCATCTTCTAGACCCCAGAGATACCA
ATGACCTGTTCGAGAAGATGTACCGGGGATCGATGTTCTATGGCAGAAAA
GGTCTCCCTGTTGCCGTCATCTCAGTGATTGATTTGGCTATCTGGGACCT
TCTGGGCAAGATTCGCAACGAACCCGTTTACAAGCTCATTGGCGGCGCTA
CCCGTTCGCGTCTGGACTTCTACTGCACTGGACCCCAGCCCGCTTCGGCC
AAGGCCATGGGTTTCTCCGGAGCCAAGGTCGCTCTTCCCCATGGCCCTGA
CGAGGGTACGGAAGGACTCTTGAAGAACGTCGACTACCTCCGCAAGCAGC
GGGAATCAGTCGGTCCCAACTTCCCTCTGCGGGTCGACTGCTACATGTCC
CTGAACGTTCCATACACAATTGAGCTGGTCAAGCGTTGTGAGGCGGAAGG
AATCAACATTGACTGGTGGGAAGAATGCTTGACCCCGGATGACTTCGACG
GTCATGCGCTTTTGAAGAGAGCCCACCCCACTGTCAAGTTCACCACCGGA
GAGCACGAGTACTCACGGTACGGTTTCCGAAAGCTCGTGGAGGGCCGTAA
CTTGGACATTCTGCAGCCGGATGTCATGTGGGTCGGTGGTATGACGGAGT
TGCTCAAGGTCTCCGCCCTTGCCAGTGCCTACGACCTCCCCGTTGTTCCT
CACGCATCTGGACCTTACTCCTACCACTTTGTGGTTTCGCAACCCAATAC
ACCCTTCCAGGAATACCTCGCCAACTCTGCAGATGGACACACTGTTGAGC
CCGTCTTCGGAAACCTCTTCCTCAACGAGCCGATCCCTACTAAGGGATAC
CTGGATGTATCGATCCTGGACAAGCCGGGCTTCGGCCTCGAGCTAAACCC
TGCTGCGTCTCTTATCCCAGCAGCTTCAATTCTCACTCCTGCACCCCAAA
AGGCACTGGTTGCTCCAACTGAGAACCAGCAGGAGTCTACTTGA
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Coding sequence (CDS) from alignment at OGUI01000003.1:4088646..4090039+

>ATCC64974_24240-T1 ID=ATCC64974_24240-T1|Name=ATCC64974_24240-T1|organism=Aspergillus niger N402|type=CDS|length=3807bp|location=Sequence derived from alignment at OGUI01000003.1:4088646..4090039+ (Aspergillus niger N402)
ATGGGTTCTACCGGACAATTTCCCCGCATCAAAGAGATCCGCACCTTCAT
CATTGATGGTGTGGGATCCGGAGGTGATTATCATAATGTCAAAGGAGGTC
ACTGGTTGATTGACAGTAACATCTCCACCCCCATGACTCGCTGGGCACAA
TACCGTGGCTCTCGCACATCATGGGGTATTAACGTCCTGGGCTCTTTCTG
CGTCGAGATTGAAGCTACCGACGGGACTAAGGGATTTGCCACGGGATTCG
GTGGTCCCCCAGCTTGTTGGCTGGTCCATCAACACTTTGAGCGCTTCCTG
CTTGGTGCTGACCCCAGAGATACCAATGACCTGTTCGAGAAGATGTACCG
GGGATCGATGTTCTATGGCAGAAAAGGTCTCCCTGTTGCCGTCATCTCAG
TGATTGATTTGGCTATCTGGGACCTTCTGGGCAAGATTCGCAACGAACCC
GTTTACAAGCTCATTGGCGGCGCTACCCGTTCGCGTCTGGACTTCTACTG
CACTGGACCCCAGCCCGCTTCGGCCAAGGCCATGGGTTTCTCCGGAGCCA
AGGTCGCTCTTCCCCATGGCCCTGACGAGGGTACGGAAGGACTCTTGAAG
AACGTCGACTACCTCCGCAAGCAGCGGGAATCAGTCGGTCCCAACTTCCC
TCTGCGGGTCGACTGCTACATGTCCCTGAACGTTCCATACACAATTGAGC
TGGTCAAGCGTTGTGAGGCGGAAGGAATCAACATTGACTGGTGGGAAGAA
TGCTTGACCCCGGATGACTTCGACGGTCATGCGCTTTTGAAGAGAGCCCA
CCCCACTGTCAAGTTCACCACCGGAGAGCACGAGTACTCACGGTACGGTT
TCCGAAAGCTCGTGGAGGGCCGTAACTTGGACATTCTGCAGCCGGATGTC
ATGTGGGTCGGTGGTATGACGGAGTTGCTCAAGGTCTCCGCCCTTGCCAG
TGCCTACGACCTCCCCGTTGTTCCTCACGCATCTGGACCTTACTCCTACC
ACTTTGTGGTTTCGCAACCCAATACACCCTTCCAGGAATACCTCGCCAAC
TCTGCAGATGGACACACTGTTGAGCCCGTCTTCGGAAACCTCTTCCTCAA
CGAGCCGATCCCTACTAAGGGATACCTGGATGTATCGATCCTGGACAAGC
CGGGCTTCGGCCTCGAGCTAAACCCTGCTGCGTCTCTTATCCCAGCAGCT
TCAATTCTCACTCCTGCACCCCAAAAGGCACTGGTTGCTCCAACTGAGAA
CCAGCAGGAGTCTACTTGAATGGGTTCTACCGGACAATTTCCCCGCATCA
AAGAGATCCGCACCTTCATCATTGATGGTGTGGGATCCGGAGGTGATTAT
CATAATGTCAAAGGAGGTCACTGGTTGATTGACAGTAACATCTCCACCCC
CATGACTCGCTGGGCACAATACCGTGGCTCTCGCACATCATGGGGTATTA
ACGTCCTGGGCTCTTTCTGCGTCGAGATTGAAGCTACCGACGGGACTAAG
GGATTTGCCACGGGATTCGGTGGTCCCCCAGCTTGTTGGCTGGTCCATCA
ACACTTTGAGCGCTTCCTGCTTGGTGCTGACCCCAGAGATACCAATGACC
TGTTCGAGAAGATGTACCGGGGATCGATGTTCTATGGCAGAAAAGGTCTC
CCTGTTGCCGTCATCTCAGTGATTGATTTGGCTATCTGGGACCTTCTGGG
CAAGATTCGCAACGAACCCGTTTACAAGCTCATTGGCGGCGCTACCCGTT
CGCGTCTGGACTTCTACTGCACTGGACCCCAGCCCGCTTCGGCCAAGGCC
ATGGGTTTCTCCGGAGCCAAGGTCGCTCTTCCCCATGGCCCTGACGAGGG
TACGGAAGGACTCTTGAAGAACGTCGACTACCTCCGCAAGCAGCGGGAAT
CAGTCGGTCCCAACTTCCCTCTGCGGGTCGACTGCTACATGTCCCTGAAC
GTTCCATACACAATTGAGCTGGTCAAGCGTTGTGAGGCGGAAGGAATCAA
CATTGACTGGTGGGAAGAATGCTTGACCCCGGATGACTTCGACGGTCATG
CGCTTTTGAAGAGAGCCCACCCCACTGTCAAGTTCACCACCGGAGAGCAC
GAGTACTCACGGTACGGTTTCCGAAAGCTCGTGGAGGGCCGTAACTTGGA
CATTCTGCAGCCGGATGTCATGTGGGTCGGTGGTATGACGGAGTTGCTCA
AGGTCTCCGCCCTTGCCAGTGCCTACGACCTCCCCGTTGTTCCTCACGCA
TCTGGACCTTACTCCTACCACTTTGTGGTTTCGCAACCCAATACACCCTT
CCAGGAATACCTCGCCAACTCTGCAGATGGACACACTGTTGAGCCCGTCT
TCGGAAACCTCTTCCTCAACGAGCCGATCCCTACTAAGGGATACCTGGAT
GTATCGATCCTGGACAAGCCGGGCTTCGGCCTCGAGCTAAACCCTGCTGC
GTCTCTTATCCCAGCAGCTTCAATTCTCACTCCTGCACCCCAAAAGGCAC
TGGTTGCTCCAACTGAGAACCAGCAGGAGTCTACTTGAATGGGTTCTACC
GGACAATTTCCCCGCATCAAAGAGATCCGCACCTTCATCATTGATGGTGT
GGGATCCGGAGGTGATTATCATAATGTCAAAGGAGGTCACTGGTTGATTG
ACAGTAACATCTCCACCCCCATGACTCGCTGGGCACAATACCGTGGCTCT
CGCACATCATGGGGTATTAACGTCCTGGGCTCTTTCTGCGTCGAGATTGA
AGCTACCGACGGGACTAAGGGATTTGCCACGGGATTCGGTGGTCCCCCAG
CTTGTTGGCTGGTCCATCAACACTTTGAGCGCTTCCTGCTTGGTGCTGAC
CCCAGAGATACCAATGACCTGTTCGAGAAGATGTACCGGGGATCGATGTT
CTATGGCAGAAAAGGTCTCCCTGTTGCCGTCATCTCAGTGATTGATTTGG
CTATCTGGGACCTTCTGGGCAAGATTCGCAACGAACCCGTTTACAAGCTC
ATTGGCGGCGCTACCCGTTCGCGTCTGGACTTCTACTGCACTGGACCCCA
GCCCGCTTCGGCCAAGGCCATGGGTTTCTCCGGAGCCAAGGTCGCTCTTC
CCCATGGCCCTGACGAGGGTACGGAAGGACTCTTGAAGAACGTCGACTAC
CTCCGCAAGCAGCGGGAATCAGTCGGTCCCAACTTCCCTCTGCGGGTCGA
CTGCTACATGTCCCTGAACGTTCCATACACAATTGAGCTGGTCAAGCGTT
GTGAGGCGGAAGGAATCAACATTGACTGGTGGGAAGAATGCTTGACCCCG
GATGACTTCGACGGTCATGCGCTTTTGAAGAGAGCCCACCCCACTGTCAA
GTTCACCACCGGAGAGCACGAGTACTCACGGTACGGTTTCCGAAAGCTCG
TGGAGGGCCGTAACTTGGACATTCTGCAGCCGGATGTCATGTGGGTCGGT
GGTATGACGGAGTTGCTCAAGGTCTCCGCCCTTGCCAGTGCCTACGACCT
CCCCGTTGTTCCTCACGCATCTGGACCTTACTCCTACCACTTTGTGGTTT
CGCAACCCAATACACCCTTCCAGGAATACCTCGCCAACTCTGCAGATGGA
CACACTGTTGAGCCCGTCTTCGGAAACCTCTTCCTCAACGAGCCGATCCC
TACTAAGGGATACCTGGATGTATCGATCCTGGACAAGCCGGGCTTCGGCC
TCGAGCTAAACCCTGCTGCGTCTCTTATCCCAGCAGCTTCAATTCTCACT
CCTGCACCCCAAAAGGCACTGGTTGCTCCAACTGAGAACCAGCAGGAGTC
TACTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0050032L-rhamnonate dehydratase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_24240ATCC64974_24240Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_24240-T1.exon1ATCC64974_24240-T1.exon1Aspergillus niger N402exon
ATCC64974_24240-T1.exon2ATCC64974_24240-T1.exon2Aspergillus niger N402exon
ATCC64974_24240-T1.exon3ATCC64974_24240-T1.exon3Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_24240-T1.cdsATCC64974_24240-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_24240-T1ATCC64974_24240-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR023444
DBxrefInterPro:IPR029065
DBxrefInterPro:IPR029017
DBxrefInterPro:IPR013341
DBxrefInterPro:IPR036849
DBxrefInterPro:IPR013342
DBxrefPFAM:PF02746
DBxrefPFAM:PF13378
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000003.1supercontigOGUI01000003.1:4088646..4090039 +
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