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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000003.1:4090481..4091536+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_24250-T1 ID=ATCC64974_24250-T1|Name=ATCC64974_24250-T1|organism=Aspergillus niger N402|type=mRNA|length=1056bp|location=Sequence derived from alignment at OGUI01000003.1:4090481..4091536+ (Aspergillus niger N402)
ATGCCTCTCCCCCAAATCCTAGTCGGCAAAGTCGCCGCCATTACAGGCGG
TTTAACCGGTATTGGCAGGGTAAGGCGAGCAGACACAAGCAAATGAACTC
ACAGTCATCCCCAAGGCCAGTCTAACATGATCTTCTTTTTAGGCCATCGC
TCTCGAATACCTCCGCCACGGCGCAAAAGTAGCCGTAAACCACCTCGGCG
GATCCAAAGAAGAGCCCCTCATCGAAGCGATGCGCAAAGACGTATCTGAG
ATTATCGGGTCCAATAACGACAGTGAGCAGAGCAGCAGCAGATTCATCCT
CGTTGCAGGAGACGTAACACAGCCCGAGACGGGGCGGGAGTTCGTAGCCA
AAGCCGTGGAAGCCTTTGGACGACTCGATGTGTTCGTGAGTAATGCGGGA
GTGTGCAAGTTCGAGGAGTTTCTCGAGTAAGTGGTCAACCCACCCCCTTA
ATAACTTTCCTTTTGTTTGTCTACCGTCTGGAAGAGCCATTTCTAACTGC
CTTATGTTGGCCTACTGTGTAGAGTCGACCCCCCTCTCCTCGGCCACACA
ATCAACACCAACCTCTGTGGCGCATTCTGGGCAACACAAGCAGCAGCACG
GCAAATGGCGCTGGCTCAATCGCCACCGGGAGGCTCCATTATCGGGATTA
GTTCTATCTCTGCACTTGTTGGGGGTGGACAGCAGACGCATTACACGCCC
ACCAAGGCGGGGGTGCTTAGTCTTATGCAGTCGTGTGCGGTGGCATTGGG
CAAATACGGCATCAGATGTAATGCGCTGCTGCCGGGAACGATCCGGACTC
AGCTGAATGATGAGGATATGAGTGATCCGGTGAAGAGGACGTATATGGAG
GGCAGGATTCCGTTGGGACGGTTGGGTCAGCCACCGGATTTGGCGGGGCC
GGCGGTGTTTTTGGCTTGTGAGGAGTTGAGTGGTTATGTGGTAAGTTTTC
TTCTCTCAGCTTTATGTTGGATGTTCTGGAAGAGGCTGCTAATGTGAATC
AATAGACTGGGGCGCAGATACTTGTGGATGGGGGGCTTTTCGTGAATCTT
CAGTAA back to topCoding sequence (CDS) from alignment at OGUI01000003.1:4090481..4091536+ >ATCC64974_24250-T1 ID=ATCC64974_24250-T1|Name=ATCC64974_24250-T1|organism=Aspergillus niger N402|type=CDS|length=3288bp|location=Sequence derived from alignment at OGUI01000003.1:4090481..4091536+ (Aspergillus niger N402)
ATGCCTCTCCCCCAAATCCTAGTCGGCAAAGTCGCCGCCATTACAGGCGG
TTTAACCGGTATTGGCAGGGCCATCGCTCTCGAATACCTCCGCCACGGCG
CAAAAGTAGCCGTAAACCACCTCGGCGGATCCAAAGAAGAGCCCCTCATC
GAAGCGATGCGCAAAGACGTATCTGAGATTATCGGGTCCAATAACGACAG
TGAGCAGAGCAGCAGCAGATTCATCCTCGTTGCAGGAGACGTAACACAGC
CCGAGACGGGGCGGGAGTTCGTAGCCAAAGCCGTGGAAGCCTTTGGACGA
CTCGATGTGTTCGTGAGTAATGCGGGAGTGTGCAAGTTCGAGGAGTTTCT
CGAAGTCGACCCCCCTCTCCTCGGCCACACAATCAACACCAACCTCTGTG
GCGCATTCTGGGCAACACAAGCAGCAGCACGGCAAATGGCGCTGGCTCAA
TCGCCACCGGGAGGCTCCATTATCGGGATTAGTTCTATCTCTGCACTTGT
TGGGGGTGGACAGCAGACGCATTACACGCCCACCAAGGCGGGGGTGCTTA
GTCTTATGCAGTCGTGTGCGGTGGCATTGGGCAAATACGGCATCAGATGT
AATGCGCTGCTGCCGGGAACGATCCGGACTCAGCTGAATGATGAGGATAT
GAGTGATCCGGTGAAGAGGACGTATATGGAGGGCAGGATTCCGTTGGGAC
GGTTGGGTCAGCCACCGGATTTGGCGGGGCCGGCGGTGTTTTTGGCTTGT
GAGGAGTTGAGTGGTTATGTGACTGGGGCGCAGATACTTGTGGATGGGGG
GCTTTTCGTGAATCTTCAGTAAATGCCTCTCCCCCAAATCCTAGTCGGCA
AAGTCGCCGCCATTACAGGCGGTTTAACCGGTATTGGCAGGGCCATCGCT
CTCGAATACCTCCGCCACGGCGCAAAAGTAGCCGTAAACCACCTCGGCGG
ATCCAAAGAAGAGCCCCTCATCGAAGCGATGCGCAAAGACGTATCTGAGA
TTATCGGGTCCAATAACGACAGTGAGCAGAGCAGCAGCAGATTCATCCTC
GTTGCAGGAGACGTAACACAGCCCGAGACGGGGCGGGAGTTCGTAGCCAA
AGCCGTGGAAGCCTTTGGACGACTCGATGTGTTCGTGAGTAATGCGGGAG
TGTGCAAGTTCGAGGAGTTTCTCGAAGTCGACCCCCCTCTCCTCGGCCAC
ACAATCAACACCAACCTCTGTGGCGCATTCTGGGCAACACAAGCAGCAGC
ACGGCAAATGGCGCTGGCTCAATCGCCACCGGGAGGCTCCATTATCGGGA
TTAGTTCTATCTCTGCACTTGTTGGGGGTGGACAGCAGACGCATTACACG
CCCACCAAGGCGGGGGTGCTTAGTCTTATGCAGTCGTGTGCGGTGGCATT
GGGCAAATACGGCATCAGATGTAATGCGCTGCTGCCGGGAACGATCCGGA
CTCAGCTGAATGATGAGGATATGAGTGATCCGGTGAAGAGGACGTATATG
GAGGGCAGGATTCCGTTGGGACGGTTGGGTCAGCCACCGGATTTGGCGGG
GCCGGCGGTGTTTTTGGCTTGTGAGGAGTTGAGTGGTTATGTGACTGGGG
CGCAGATACTTGTGGATGGGGGGCTTTTCGTGAATCTTCAGTAAATGCCT
CTCCCCCAAATCCTAGTCGGCAAAGTCGCCGCCATTACAGGCGGTTTAAC
CGGTATTGGCAGGGCCATCGCTCTCGAATACCTCCGCCACGGCGCAAAAG
TAGCCGTAAACCACCTCGGCGGATCCAAAGAAGAGCCCCTCATCGAAGCG
ATGCGCAAAGACGTATCTGAGATTATCGGGTCCAATAACGACAGTGAGCA
GAGCAGCAGCAGATTCATCCTCGTTGCAGGAGACGTAACACAGCCCGAGA
CGGGGCGGGAGTTCGTAGCCAAAGCCGTGGAAGCCTTTGGACGACTCGAT
GTGTTCGTGAGTAATGCGGGAGTGTGCAAGTTCGAGGAGTTTCTCGAAGT
CGACCCCCCTCTCCTCGGCCACACAATCAACACCAACCTCTGTGGCGCAT
TCTGGGCAACACAAGCAGCAGCACGGCAAATGGCGCTGGCTCAATCGCCA
CCGGGAGGCTCCATTATCGGGATTAGTTCTATCTCTGCACTTGTTGGGGG
TGGACAGCAGACGCATTACACGCCCACCAAGGCGGGGGTGCTTAGTCTTA
TGCAGTCGTGTGCGGTGGCATTGGGCAAATACGGCATCAGATGTAATGCG
CTGCTGCCGGGAACGATCCGGACTCAGCTGAATGATGAGGATATGAGTGA
TCCGGTGAAGAGGACGTATATGGAGGGCAGGATTCCGTTGGGACGGTTGG
GTCAGCCACCGGATTTGGCGGGGCCGGCGGTGTTTTTGGCTTGTGAGGAG
TTGAGTGGTTATGTGACTGGGGCGCAGATACTTGTGGATGGGGGGCTTTT
CGTGAATCTTCAGTAAATGCCTCTCCCCCAAATCCTAGTCGGCAAAGTCG
CCGCCATTACAGGCGGTTTAACCGGTATTGGCAGGGCCATCGCTCTCGAA
TACCTCCGCCACGGCGCAAAAGTAGCCGTAAACCACCTCGGCGGATCCAA
AGAAGAGCCCCTCATCGAAGCGATGCGCAAAGACGTATCTGAGATTATCG
GGTCCAATAACGACAGTGAGCAGAGCAGCAGCAGATTCATCCTCGTTGCA
GGAGACGTAACACAGCCCGAGACGGGGCGGGAGTTCGTAGCCAAAGCCGT
GGAAGCCTTTGGACGACTCGATGTGTTCGTGAGTAATGCGGGAGTGTGCA
AGTTCGAGGAGTTTCTCGAAGTCGACCCCCCTCTCCTCGGCCACACAATC
AACACCAACCTCTGTGGCGCATTCTGGGCAACACAAGCAGCAGCACGGCA
AATGGCGCTGGCTCAATCGCCACCGGGAGGCTCCATTATCGGGATTAGTT
CTATCTCTGCACTTGTTGGGGGTGGACAGCAGACGCATTACACGCCCACC
AAGGCGGGGGTGCTTAGTCTTATGCAGTCGTGTGCGGTGGCATTGGGCAA
ATACGGCATCAGATGTAATGCGCTGCTGCCGGGAACGATCCGGACTCAGC
TGAATGATGAGGATATGAGTGATCCGGTGAAGAGGACGTATATGGAGGGC
AGGATTCCGTTGGGACGGTTGGGTCAGCCACCGGATTTGGCGGGGCCGGC
GGTGTTTTTGGCTTGTGAGGAGTTGAGTGGTTATGTGACTGGGGCGCAGA
TACTTGTGGATGGGGGGCTTTTCGTGAATCTTCAGTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_24250-T1 | ATCC64974_24250-T1-protein | Aspergillus niger N402 | polypeptide |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR002347 |
| DBxref | PFAM:PF08659 |
| DBxref | PFAM:PF13561 |
| DBxref | PFAM:PF00106 |
| Product | L-rhamnose-1-dehydrogenase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000003.1 | supercontig | OGUI01000003.1:4090481..4091536 + |
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