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ATCC64974_24370-T1, ATCC64974_24370-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_24370-T1
Unique NameATCC64974_24370-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000003.1:4128411..4129147-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_24370-T1 ID=ATCC64974_24370-T1|Name=ATCC64974_24370-T1|organism=Aspergillus niger N402|type=mRNA|length=737bp|location=Sequence derived from alignment at OGUI01000003.1:4128411..4129147- (Aspergillus niger N402)
ATGGATTCCGCCAAGCAGCCCGCTAAGCTCGTCAAGGTCACCCGTGTCCT
CGGCCGTACCGGTACGTCGTGAATATCTCAATTTTCCGAATTTCGATGCC
TTTCGCCTGGATATATACAATTGCGGTGTTTCCGCAACGGCGTGGGGATG
GTACCTTTTGCTTGAGAGCAGATTCTAACAAGCATTTTACTTTTTAGGAT
CCCGTGGTGGTGTCACCCAGGTCCGCGTCGAGTTCATGGACGATACCTCC
CGCAGCATCATCCGTAACGTCAAGGGCCCAGGTATGCGATTTCTCCGTTG
ATTGCAGTTGATGATATATATTTTCTACGGCTATGGTGGTGGCGCTGGTT
GGACCGAATCGAATTATTTCCCCTCGAAGAGAAAATCCCGCGAGAAGAAT
GGCAAAGAATGAGAGTGCGCACGCATCGGAAATCGACAACATCCACGATT
CTATAAGCGAAAAGGACGAATCTCCCAAACCCAACACGACGCACGCAGGA
ATCGAAGAGAAGGAATAAGGAAACCAAGCAGTATCGCGGGTTATTTTCAT
CTCCACGGGGAAATATCGCATTCAGTCCAGCCAGCCAGCCAACCAACCAG
TCGCTGCGTCATGTCCAAACCAAACCCATATATCGCACACATCAAGCTAA
CTAAACTCCTCTTCGTCGCAAACAGTCAAGGTCGACGACATCCTCTGCCT
GCTCGAGTCCGAACGCGAGGCCCGCCGTCTCCGTTAA
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Coding sequence (CDS) from alignment at OGUI01000003.1:4128411..4129147-

>ATCC64974_24370-T1 ID=ATCC64974_24370-T1|Name=ATCC64974_24370-T1|organism=Aspergillus niger N402|type=CDS|length=621bp|location=Sequence derived from alignment at OGUI01000003.1:4128411..4129147- (Aspergillus niger N402)
TCAAGGTCGACGACATCCTCTGCCTGCTCGAGTCCGAACGCGAGGCCCGC
CGTCTCCGTTAAGATCCCGTGGTGGTGTCACCCAGGTCCGCGTCGAGTTC
ATGGACGATACCTCCCGCAGCATCATCCGTAACGTCAAGGGCCCAGATGG
ATTCCGCCAAGCAGCCCGCTAAGCTCGTCAAGGTCACCCGTGTCCTCGGC
CGTACCGTCAAGGTCGACGACATCCTCTGCCTGCTCGAGTCCGAACGCGA
GGCCCGCCGTCTCCGTTAAGATCCCGTGGTGGTGTCACCCAGGTCCGCGT
CGAGTTCATGGACGATACCTCCCGCAGCATCATCCGTAACGTCAAGGGCC
CAGATGGATTCCGCCAAGCAGCCCGCTAAGCTCGTCAAGGTCACCCGTGT
CCTCGGCCGTACCGTCAAGGTCGACGACATCCTCTGCCTGCTCGAGTCCG
AACGCGAGGCCCGCCGTCTCCGTTAAGATCCCGTGGTGGTGTCACCCAGG
TCCGCGTCGAGTTCATGGACGATACCTCCCGCAGCATCATCCGTAACGTC
AAGGGCCCAGATGGATTCCGCCAAGCAGCCCGCTAAGCTCGTCAAGGTCA
CCCGTGTCCTCGGCCGTACCG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPS28ATCC64974_24370Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_24370-T1ATCC64974_24370-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_24370-T1.cdsATCC64974_24370-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_24370-T1.exon3ATCC64974_24370-T1.exon3Aspergillus niger N402exon
ATCC64974_24370-T1.exon2ATCC64974_24370-T1.exon2Aspergillus niger N402exon
ATCC64974_24370-T1.exon1ATCC64974_24370-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR012340
DBxrefInterPro:IPR028626
DBxrefInterPro:IPR000289
DBxrefPFAM:PF01200
Product40S ribosomal protein S28
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000003.1supercontigOGUI01000003.1:4128411..4129147 -
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