You are here

Home

ATCC64974_24410-T1, ATCC64974_24410-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_24410-T1
Unique NameATCC64974_24410-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000003.1:4137806..4138926+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_24410-T1 ID=ATCC64974_24410-T1|Name=ATCC64974_24410-T1|organism=Aspergillus niger N402|type=mRNA|length=1121bp|location=Sequence derived from alignment at OGUI01000003.1:4137806..4138926+ (Aspergillus niger N402)
ATGACCATCACAAACCGCCAACTCATCTACGTCAAGGCCCCAACGGCAGC
CATCGACCCATCCGTGACGACGGGCACCTTCAACCTCAAGAGCACCACGA
TCGCCTCCAAAGACAATGTCCCCGACGACAAAGTCCTCGTACGCATCCAC
TACCTGGCCCTTGAGCCCGCCATGCGCCAATGGCTTACAGCCAAACGGTC
GTACATCGCGCCCGTTAAAATCGGCAGTATCATGCGTGGCCAAAGCATCG
CCCAGGTCCTCTCCGTGGGCAGCAGCCTGAAATCTCAATACAAAGTTGGT
GACTGGGTGATTGCCTACTCGGGATGGCAGGAATACGCATTCCTGGGCGC
CAAAGAGGCGCAAAAGATCTCCGTGCCTGCGGGCTGCAAGCCCACGGACG
CGATGTCCGTGCTGGGCATGACTGGCCTGACGGCGTACTTCGGCATGATG
GATGTGGGCAAGCCGAAGGCAGGAGATACGGTGGTGGTGTCTGGGGCAGC
GGGAGCAACGGGGATGGTGGCGGGCCAGATTGCGAAGATTCAAGGAGCAA
AGAGGGTGATTGGGATTGCGGGAAGTAAGGACAAGTGTGAGTTCTTGTGT
CGGGAGTTGGGATTTGATGTGGCGATCAATTATAAGGATGAGGATTGGAA
GAAGCAGCTCAAGGAGGCGACGCCGGAGTATATCGATGTTTACTTTGATA
ATGTGGGCGGGGAGATTCTGGATGCGTGTTTGGGGCGGGCGGCGCAGTTT
GCCAGGTTTGTCATTTGTGGTGCGATTAGCCAGTATAATGTTGCGAAGCC
GAAGGGGCCGGCAAATATCATGCAGGTTATTGTGAGTATCTCTATGCCAT
ATTTGCGTGGGAAATATGCTGACAGAAGCAGTCGCAACGAGTCAAAATGC
AGGGCTACATCGTGTTCGACTACGCGAAGCAGTACCCGGATGCGTTGCAG
GATTTGGCCAAGTGGTTAACGCAGGGCAAGATCAAGCGCAAGGAGCACAT
TGTCAAAGGGGGGTTGGAGTCGGCGCCGCAAAGTCTGGTAGATTTGTATA
AGGGAGTGAATACGGGCAAGATGATGGTGGAGGTGGTGCCGGCAGAGGAG
GGAATCAAGGCCAAGTTGTAA
back to top

Coding sequence (CDS) from alignment at OGUI01000003.1:4137806..4138926+

>ATCC64974_24410-T1 ID=ATCC64974_24410-T1|Name=ATCC64974_24410-T1|organism=Aspergillus niger N402|type=CDS|length=2142bp|location=Sequence derived from alignment at OGUI01000003.1:4137806..4138926+ (Aspergillus niger N402)
ATGACCATCACAAACCGCCAACTCATCTACGTCAAGGCCCCAACGGCAGC
CATCGACCCATCCGTGACGACGGGCACCTTCAACCTCAAGAGCACCACGA
TCGCCTCCAAAGACAATGTCCCCGACGACAAAGTCCTCGTACGCATCCAC
TACCTGGCCCTTGAGCCCGCCATGCGCCAATGGCTTACAGCCAAACGGTC
GTACATCGCGCCCGTTAAAATCGGCAGTATCATGCGTGGCCAAAGCATCG
CCCAGGTCCTCTCCGTGGGCAGCAGCCTGAAATCTCAATACAAAGTTGGT
GACTGGGTGATTGCCTACTCGGGATGGCAGGAATACGCATTCCTGGGCGC
CAAAGAGGCGCAAAAGATCTCCGTGCCTGCGGGCTGCAAGCCCACGGACG
CGATGTCCGTGCTGGGCATGACTGGCCTGACGGCGTACTTCGGCATGATG
GATGTGGGCAAGCCGAAGGCAGGAGATACGGTGGTGGTGTCTGGGGCAGC
GGGAGCAACGGGGATGGTGGCGGGCCAGATTGCGAAGATTCAAGGAGCAA
AGAGGGTGATTGGGATTGCGGGAAGTAAGGACAAGTGTGAGTTCTTGTGT
CGGGAGTTGGGATTTGATGTGGCGATCAATTATAAGGATGAGGATTGGAA
GAAGCAGCTCAAGGAGGCGACGCCGGAGTATATCGATGTTTACTTTGATA
ATGTGGGCGGGGAGATTCTGGATGCGTGTTTGGGGCGGGCGGCGCAGTTT
GCCAGGTTTGTCATTTGTGGTGCGATTAGCCAGTATAATGTTGCGAAGCC
GAAGGGGCCGGCAAATATCATGCAGGTTATTTCGCAACGAGTCAAAATGC
AGGGCTACATCGTGTTCGACTACGCGAAGCAGTACCCGGATGCGTTGCAG
GATTTGGCCAAGTGGTTAACGCAGGGCAAGATCAAGCGCAAGGAGCACAT
TGTCAAAGGGGGGTTGGAGTCGGCGCCGCAAAGTCTGGTAGATTTGTATA
AGGGAGTGAATACGGGCAAGATGATGGTGGAGGTGGTGCCGGCAGAGGAG
GGAATCAAGGCCAAGTTGTAAATGACCATCACAAACCGCCAACTCATCTA
CGTCAAGGCCCCAACGGCAGCCATCGACCCATCCGTGACGACGGGCACCT
TCAACCTCAAGAGCACCACGATCGCCTCCAAAGACAATGTCCCCGACGAC
AAAGTCCTCGTACGCATCCACTACCTGGCCCTTGAGCCCGCCATGCGCCA
ATGGCTTACAGCCAAACGGTCGTACATCGCGCCCGTTAAAATCGGCAGTA
TCATGCGTGGCCAAAGCATCGCCCAGGTCCTCTCCGTGGGCAGCAGCCTG
AAATCTCAATACAAAGTTGGTGACTGGGTGATTGCCTACTCGGGATGGCA
GGAATACGCATTCCTGGGCGCCAAAGAGGCGCAAAAGATCTCCGTGCCTG
CGGGCTGCAAGCCCACGGACGCGATGTCCGTGCTGGGCATGACTGGCCTG
ACGGCGTACTTCGGCATGATGGATGTGGGCAAGCCGAAGGCAGGAGATAC
GGTGGTGGTGTCTGGGGCAGCGGGAGCAACGGGGATGGTGGCGGGCCAGA
TTGCGAAGATTCAAGGAGCAAAGAGGGTGATTGGGATTGCGGGAAGTAAG
GACAAGTGTGAGTTCTTGTGTCGGGAGTTGGGATTTGATGTGGCGATCAA
TTATAAGGATGAGGATTGGAAGAAGCAGCTCAAGGAGGCGACGCCGGAGT
ATATCGATGTTTACTTTGATAATGTGGGCGGGGAGATTCTGGATGCGTGT
TTGGGGCGGGCGGCGCAGTTTGCCAGGTTTGTCATTTGTGGTGCGATTAG
CCAGTATAATGTTGCGAAGCCGAAGGGGCCGGCAAATATCATGCAGGTTA
TTTCGCAACGAGTCAAAATGCAGGGCTACATCGTGTTCGACTACGCGAAG
CAGTACCCGGATGCGTTGCAGGATTTGGCCAAGTGGTTAACGCAGGGCAA
GATCAAGCGCAAGGAGCACATTGTCAAAGGGGGGTTGGAGTCGGCGCCGC
AAAGTCTGGTAGATTTGTATAAGGGAGTGAATACGGGCAAGATGATGGTG
GAGGTGGTGCCGGCAGAGGAGGGAATCAAGGCCAAGTTGTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_24410ATCC64974_24410Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_24410-T1.exon1ATCC64974_24410-T1.exon1Aspergillus niger N402exon
ATCC64974_24410-T1.exon2ATCC64974_24410-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_24410-T1.cdsATCC64974_24410-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_24410-T1ATCC64974_24410-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR011032
DBxrefInterPro:IPR041694
DBxrefInterPro:IPR013149
DBxrefInterPro:IPR020843
DBxrefPFAM:PF13602
DBxrefPFAM:PF00107
DBxrefPFAM:PF16884
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000003.1supercontigOGUI01000003.1:4137806..4138926 +
Powered by Drupal