You are here

Home

ATCC64974_2500-T1, ATCC64974_2500-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_2500-T1
Unique NameATCC64974_2500-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000001.1:776875..778534+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_2500-T1 ID=ATCC64974_2500-T1|Name=ATCC64974_2500-T1|organism=Aspergillus niger N402|type=mRNA|length=1660bp|location=Sequence derived from alignment at OGUI01000001.1:776875..778534+ (Aspergillus niger N402)
ATGGGCAATATTCCAGATGACAAGCGACACACAGTCGTTCAGGCTATCCC
GGTTGGCGTGGGAGATGAAGCCGAGTTCGCGCAGGAGTTCACTCGTAAGG
AACATGCGCTGGGGTTCTGGGAAGCCATGCGACTGCACTGGCCGGCTGTG
GCTTGGGCATCGTTCATGAACCTAGTAAGAGAATTTTGTTCGTTGGAAAA
GCAATTGTTGACTTCTCACAGGCGACCATTCTGAAAGGAATTGTAGGTCA
TCTCATCCTCCATGTGAGATGCAGCCCTAACTGGTATAGGATGGCGGCAT
TGTCAAAGGACTGGTTGGTCTCGACGTCTTTAAGAAGACTTACGGCTACA
ACTACCATGGGGAATACGTCCTAGCGGCTCGGTGGATCTCTGCCTTCCAA
TACGCCAACTTAGTAGGAGCCATCGTGGGCGCTCTCTGCTCGGGCTTTGC
CTACGATCGCTTTGGTCCGCGCGTGATGATAGCGGTGTGCTCGTCTTTAT
CCATCGCCTTTATCTTCCTGCAGTTCTTCAGTCATACGCCAGCCCAACTC
TTTGTAGGCGAGCTCATCAATGGGTGCATCATCGCATTTTACCCCATCTG
TGCCTCCGCGTACGTGGGAGAGGTGACCCCGCTGGCACTCCGCGGGTTCG
CTGCTACAATGACCAACCTCGCCTTCTCGATCGGCTCGCTCATCGCATCA
GGCATTCTGAAAGGGACGGAATCGCTGAATACCACCATGTCGTACAAAAT
TCCTATCGCGACGCAGTGGGCGCTACCATGTATCATGCTGGCGCTGATCT
TCTTCTGCCCCGATCCACCATACTGGCTATGTCGGCATGGTCGCAACGAA
GCGGCACGAGCATCGCTGCGGCGTCTGGCCACCCCAGCTGTAGATGTATC
GCGCCAACTATCTCATATTGAAGAGACATTGCGTCTAGAGGCCAGTTTTC
AGGCCGACCGACCGACGTACCGGGAATGTCTGCGTGGGCCAAACCTCCGT
CGGCTGCTGATCTGCGTGATGGCCTACAACATGCAAGCGTTCACCGGAAA
TGTCTTTTTCATCAACTACGCTGTGCACTTTATGGAGCTGGCGGGCTTGG
ACTCGTCGCATGCATTCTCGATGAACATCGGACTGACGGCGTTGGGACTA
GTCGGGACGTGTCTGTCGTGGCTATTACTGCCCTACGTCGGCCGCCGAAC
TATGTATATCTTCGGGTGCTCCGCATTGGCGGTGGTACAGTGCCTGATCG
GTGTGCTCGATGTTGTTCCGCGAGACACTGCCACGGTATGGGGACAGTGT
GGGCTCATGCTGGCCTGCACGTTCGTGTATGATCTCAGTCTCGGCCCGTT
CTGCTATGTGCTGCTGGCAGAGGTATCATCGGCGCGATTGCGGGGACTGA
CCATTGCGCTGGCCACAGTCAGCTGCTTTGTGTGGTCGGTAGTGTTTGCA
GTGGTGATTCCGTATGCGATGAATGAAGACGAGGGGAATTGGCGGGGCAA
GCTGGGATTTTTGTTTGCGGGGTTGGGTGCGCTGTGCGCGGGATATTGTT
TCTGGTGTATGCCAGAGACACAAGGAAAGACCTTTGAAGAGTTGGATGTA
CTGTTTGAGAAGGGCGTTCCAAGTCGAAAGTTCAAGAATTGTGTGGTTGA
GATGCAGTAA
back to top

Coding sequence (CDS) from alignment at OGUI01000001.1:776875..778534+

>ATCC64974_2500-T1 ID=ATCC64974_2500-T1|Name=ATCC64974_2500-T1|organism=Aspergillus niger N402|type=CDS|length=4698bp|location=Sequence derived from alignment at OGUI01000001.1:776875..778534+ (Aspergillus niger N402)
ATGGGCAATATTCCAGATGACAAGCGACACACAGTCGTTCAGGCTATCCC
GGTTGGCGTGGGAGATGAAGCCGAGTTCGCGCAGGAGTTCACTCGTAAGG
AACATGCGCTGGGGTTCTGGGAAGCCATGCGACTGCACTGGCCGGCTGTG
GCTTGGGCATCGTTCATGAACCTAGCGACCATTCTGAAAGGAATTGATGG
CGGCATTGTCAAAGGACTGGTTGGTCTCGACGTCTTTAAGAAGACTTACG
GCTACAACTACCATGGGGAATACGTCCTAGCGGCTCGGTGGATCTCTGCC
TTCCAATACGCCAACTTAGTAGGAGCCATCGTGGGCGCTCTCTGCTCGGG
CTTTGCCTACGATCGCTTTGGTCCGCGCGTGATGATAGCGGTGTGCTCGT
CTTTATCCATCGCCTTTATCTTCCTGCAGTTCTTCAGTCATACGCCAGCC
CAACTCTTTGTAGGCGAGCTCATCAATGGGTGCATCATCGCATTTTACCC
CATCTGTGCCTCCGCGTACGTGGGAGAGGTGACCCCGCTGGCACTCCGCG
GGTTCGCTGCTACAATGACCAACCTCGCCTTCTCGATCGGCTCGCTCATC
GCATCAGGCATTCTGAAAGGGACGGAATCGCTGAATACCACCATGTCGTA
CAAAATTCCTATCGCGACGCAGTGGGCGCTACCATGTATCATGCTGGCGC
TGATCTTCTTCTGCCCCGATCCACCATACTGGCTATGTCGGCATGGTCGC
AACGAAGCGGCACGAGCATCGCTGCGGCGTCTGGCCACCCCAGCTGTAGA
TGTATCGCGCCAACTATCTCATATTGAAGAGACATTGCGTCTAGAGGCCA
GTTTTCAGGCCGACCGACCGACGTACCGGGAATGTCTGCGTGGGCCAAAC
CTCCGTCGGCTGCTGATCTGCGTGATGGCCTACAACATGCAAGCGTTCAC
CGGAAATGTCTTTTTCATCAACTACGCTGTGCACTTTATGGAGCTGGCGG
GCTTGGACTCGTCGCATGCATTCTCGATGAACATCGGACTGACGGCGTTG
GGACTAGTCGGGACGTGTCTGTCGTGGCTATTACTGCCCTACGTCGGCCG
CCGAACTATGTATATCTTCGGGTGCTCCGCATTGGCGGTGGTACAGTGCC
TGATCGGTGTGCTCGATGTTGTTCCGCGAGACACTGCCACGGTATGGGGA
CAGTGTGGGCTCATGCTGGCCTGCACGTTCGTGTATGATCTCAGTCTCGG
CCCGTTCTGCTATGTGCTGCTGGCAGAGGTATCATCGGCGCGATTGCGGG
GACTGACCATTGCGCTGGCCACAGTCAGCTGCTTTGTGTGGTCGGTAGTG
TTTGCAGTGGTGATTCCGTATGCGATGAATGAAGACGAGGGGAATTGGCG
GGGCAAGCTGGGATTTTTGTTTGCGGGGTTGGGTGCGCTGTGCGCGGGAT
ATTGTTTCTGGTGTATGCCAGAGACACAAGGAAAGACCTTTGAAGAGTTG
GATGTACTGTTTGAGAAGGGCGTTCCAAGTCGAAAGTTCAAGAATTGTGT
GGTTGAGATGCAGTAAATGGGCAATATTCCAGATGACAAGCGACACACAG
TCGTTCAGGCTATCCCGGTTGGCGTGGGAGATGAAGCCGAGTTCGCGCAG
GAGTTCACTCGTAAGGAACATGCGCTGGGGTTCTGGGAAGCCATGCGACT
GCACTGGCCGGCTGTGGCTTGGGCATCGTTCATGAACCTAGCGACCATTC
TGAAAGGAATTGATGGCGGCATTGTCAAAGGACTGGTTGGTCTCGACGTC
TTTAAGAAGACTTACGGCTACAACTACCATGGGGAATACGTCCTAGCGGC
TCGGTGGATCTCTGCCTTCCAATACGCCAACTTAGTAGGAGCCATCGTGG
GCGCTCTCTGCTCGGGCTTTGCCTACGATCGCTTTGGTCCGCGCGTGATG
ATAGCGGTGTGCTCGTCTTTATCCATCGCCTTTATCTTCCTGCAGTTCTT
CAGTCATACGCCAGCCCAACTCTTTGTAGGCGAGCTCATCAATGGGTGCA
TCATCGCATTTTACCCCATCTGTGCCTCCGCGTACGTGGGAGAGGTGACC
CCGCTGGCACTCCGCGGGTTCGCTGCTACAATGACCAACCTCGCCTTCTC
GATCGGCTCGCTCATCGCATCAGGCATTCTGAAAGGGACGGAATCGCTGA
ATACCACCATGTCGTACAAAATTCCTATCGCGACGCAGTGGGCGCTACCA
TGTATCATGCTGGCGCTGATCTTCTTCTGCCCCGATCCACCATACTGGCT
ATGTCGGCATGGTCGCAACGAAGCGGCACGAGCATCGCTGCGGCGTCTGG
CCACCCCAGCTGTAGATGTATCGCGCCAACTATCTCATATTGAAGAGACA
TTGCGTCTAGAGGCCAGTTTTCAGGCCGACCGACCGACGTACCGGGAATG
TCTGCGTGGGCCAAACCTCCGTCGGCTGCTGATCTGCGTGATGGCCTACA
ACATGCAAGCGTTCACCGGAAATGTCTTTTTCATCAACTACGCTGTGCAC
TTTATGGAGCTGGCGGGCTTGGACTCGTCGCATGCATTCTCGATGAACAT
CGGACTGACGGCGTTGGGACTAGTCGGGACGTGTCTGTCGTGGCTATTAC
TGCCCTACGTCGGCCGCCGAACTATGTATATCTTCGGGTGCTCCGCATTG
GCGGTGGTACAGTGCCTGATCGGTGTGCTCGATGTTGTTCCGCGAGACAC
TGCCACGGTATGGGGACAGTGTGGGCTCATGCTGGCCTGCACGTTCGTGT
ATGATCTCAGTCTCGGCCCGTTCTGCTATGTGCTGCTGGCAGAGGTATCA
TCGGCGCGATTGCGGGGACTGACCATTGCGCTGGCCACAGTCAGCTGCTT
TGTGTGGTCGGTAGTGTTTGCAGTGGTGATTCCGTATGCGATGAATGAAG
ACGAGGGGAATTGGCGGGGCAAGCTGGGATTTTTGTTTGCGGGGTTGGGT
GCGCTGTGCGCGGGATATTGTTTCTGGTGTATGCCAGAGACACAAGGAAA
GACCTTTGAAGAGTTGGATGTACTGTTTGAGAAGGGCGTTCCAAGTCGAA
AGTTCAAGAATTGTGTGGTTGAGATGCAGTAAATGGGCAATATTCCAGAT
GACAAGCGACACACAGTCGTTCAGGCTATCCCGGTTGGCGTGGGAGATGA
AGCCGAGTTCGCGCAGGAGTTCACTCGTAAGGAACATGCGCTGGGGTTCT
GGGAAGCCATGCGACTGCACTGGCCGGCTGTGGCTTGGGCATCGTTCATG
AACCTAGCGACCATTCTGAAAGGAATTGATGGCGGCATTGTCAAAGGACT
GGTTGGTCTCGACGTCTTTAAGAAGACTTACGGCTACAACTACCATGGGG
AATACGTCCTAGCGGCTCGGTGGATCTCTGCCTTCCAATACGCCAACTTA
GTAGGAGCCATCGTGGGCGCTCTCTGCTCGGGCTTTGCCTACGATCGCTT
TGGTCCGCGCGTGATGATAGCGGTGTGCTCGTCTTTATCCATCGCCTTTA
TCTTCCTGCAGTTCTTCAGTCATACGCCAGCCCAACTCTTTGTAGGCGAG
CTCATCAATGGGTGCATCATCGCATTTTACCCCATCTGTGCCTCCGCGTA
CGTGGGAGAGGTGACCCCGCTGGCACTCCGCGGGTTCGCTGCTACAATGA
CCAACCTCGCCTTCTCGATCGGCTCGCTCATCGCATCAGGCATTCTGAAA
GGGACGGAATCGCTGAATACCACCATGTCGTACAAAATTCCTATCGCGAC
GCAGTGGGCGCTACCATGTATCATGCTGGCGCTGATCTTCTTCTGCCCCG
ATCCACCATACTGGCTATGTCGGCATGGTCGCAACGAAGCGGCACGAGCA
TCGCTGCGGCGTCTGGCCACCCCAGCTGTAGATGTATCGCGCCAACTATC
TCATATTGAAGAGACATTGCGTCTAGAGGCCAGTTTTCAGGCCGACCGAC
CGACGTACCGGGAATGTCTGCGTGGGCCAAACCTCCGTCGGCTGCTGATC
TGCGTGATGGCCTACAACATGCAAGCGTTCACCGGAAATGTCTTTTTCAT
CAACTACGCTGTGCACTTTATGGAGCTGGCGGGCTTGGACTCGTCGCATG
CATTCTCGATGAACATCGGACTGACGGCGTTGGGACTAGTCGGGACGTGT
CTGTCGTGGCTATTACTGCCCTACGTCGGCCGCCGAACTATGTATATCTT
CGGGTGCTCCGCATTGGCGGTGGTACAGTGCCTGATCGGTGTGCTCGATG
TTGTTCCGCGAGACACTGCCACGGTATGGGGACAGTGTGGGCTCATGCTG
GCCTGCACGTTCGTGTATGATCTCAGTCTCGGCCCGTTCTGCTATGTGCT
GCTGGCAGAGGTATCATCGGCGCGATTGCGGGGACTGACCATTGCGCTGG
CCACAGTCAGCTGCTTTGTGTGGTCGGTAGTGTTTGCAGTGGTGATTCCG
TATGCGATGAATGAAGACGAGGGGAATTGGCGGGGCAAGCTGGGATTTTT
GTTTGCGGGGTTGGGTGCGCTGTGCGCGGGATATTGTTTCTGGTGTATGC
CAGAGACACAAGGAAAGACCTTTGAAGAGTTGGATGTACTGTTTGAGAAG
GGCGTTCCAAGTCGAAAGTTCAAGAATTGTGTGGTTGAGATGCAGTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_2500ATCC64974_2500Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_2500-T1.exon1ATCC64974_2500-T1.exon1Aspergillus niger N402exon
ATCC64974_2500-T1.exon2ATCC64974_2500-T1.exon2Aspergillus niger N402exon
ATCC64974_2500-T1.exon3ATCC64974_2500-T1.exon3Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_2500-T1.cdsATCC64974_2500-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_2500-T1ATCC64974_2500-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR003663
DBxrefInterPro:IPR005828
DBxrefPFAM:PF00083
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000001.1supercontigOGUI01000001.1:776875..778534 +
Powered by Drupal