You are here

Home

ATCC64974_25380-T1, ATCC64974_25380-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_25380-T1
Unique NameATCC64974_25380-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000003.1:4442003..4443696+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_25380-T1 ID=ATCC64974_25380-T1|Name=ATCC64974_25380-T1|organism=Aspergillus niger N402|type=mRNA|length=1694bp|location=Sequence derived from alignment at OGUI01000003.1:4442003..4443696+ (Aspergillus niger N402)
ATGGTGCACCCGGTTAGGTCTCTCAACAAAGAGCTCGATCGTAAGTGTAA
ATGGAATAAGTAATGTTTCCCGCTAACAGCTCGTAGAGGTCGACACCGAA
TCGAGAGGTTATCGATCGTCTGACACAACGGAGGGCGGATCTTCCAAGGT
CGAAGACGGTGATGAGCCTATCGAAGAGACCTCCAGGAGGGGCGTCTCTC
GCAACAAAAGTCATGGAACTCAACGCACAAATTTCTCGCGAAACAAAAGC
CATGCCAGTCACCGCACTGGCGTATCTCAAAATCAGAGTTATCGAAGCCA
GCCTCCCGCTACCCTGAGGAACCAAAGCTATGGGAGTCAAGCACAGTTCT
CCCTGGCAGGTCCGAATGCGTATTATGGACCACTACCTCAACAGGGCGCC
TACATGCATCCGGAGTATCAGTCATTTAATCCTCAATACGGAAACATGCA
AGGGGACAAGCCTGTCTGGAGTCTAGCGCAGCCGCTGCCCCATGTTGTCC
GAGACGGAATGCGGTATGGAGCCTTGCCGGAGGATCGAAAGGAAGAAAGA
GACGAGGATGGACGAGAACGCCCGCCTCCAGCGTCAGAAGAGCCGCCCAC
GGATATTCCGAAGACGGATGAAGCTAGAGAGAATGGCGAAGAGCCCCAGA
ATGAGATGGGATTTTTCAATAAGTGGTCCAAGATTCGATATTATCTGAGG
GAGCCATTGGGCGAGTGGTTGGGGGTGAGTATTCACTTGGACTATCTATT
CTAATACAGCCCAAACTAACACACAATCACCAGACAACCATCGCCATCAC
TCTCGGTCTCTGCGGCGGGTTGTCAACCTACACATCGGACGGCCAAGCCG
GCTCATGGATGACCCAGAGTGCCTGTTGGGGCTTCAGCTTCATGATCGGC
ATCTACATTGTTGGTGGCATCTCCGGTGGCCACCTCAATCCCGCCATCAC
AATCTCCATGTCCCTCTGGCGAGGATTTCCCGCCCGCCGATGTGTTATTT
ACATCCTCGCTCAGCTGATCGGCGCCATCACCGCCGGCGGATTCGCCTAC
GCCATTTACCACGACGCCATCGTCAACCTCTCCGTCGAGACCAACCTCCC
ACAAAGCGAAACAACAGCTAGCCAAGCATTTCTAACTCTACCAAAACAAT
TCGTCAGTCCAGCTACTGCATTCTTCAATGAGTTCCTAGGCACCGCTATT
CTCGTCGGAACCATCATGGCCTTGGGTGACGACACCAACGCCCCCCCAGG
AGCAGGAATGCAAGCATTCATCATCGGCATACTGATCACCGTATTAGTCC
TTGCCCTAGGATATAACACAGGCGGGTACGTACCCCCTCTCTCCCCCACC
CCAGAAGCCCCGACGACTAATAATTACCAAGAGCATTCAACGGCCCCCGC
GACTTCGGCCCCCGGCTCGTCGCCGTAATGGCCGGGTGGGGCGGACACCT
CTTCAAAGAGTACCATGCCTGGTGGATCTGGGGCCCTTGGGTCGCCGACA
TCTTCGGAGGATTGTTCGGGGCGTTCATCTACGATTTAGTGGTGTTCACT
GGTGGCGAAAGCCCGATCAATTACCCGCCGAGGAGACGCAAGCGCGCACT
GCTGATCAAGGAGAAGAATCTGAGAAGCAAGTTGCGTTTTGGGAGGAGGA
AGATCGGGGATATTGAGAGGGCAGTTGAGGAGAACCAGGATTGA
back to top

Coding sequence (CDS) from alignment at OGUI01000003.1:4442003..4443696+

>ATCC64974_25380-T1 ID=ATCC64974_25380-T1|Name=ATCC64974_25380-T1|organism=Aspergillus niger N402|type=CDS|length=6132bp|location=Sequence derived from alignment at OGUI01000003.1:4442003..4443696+ (Aspergillus niger N402)
ATGGTGCACCCGGTTAGGTCTCTCAACAAAGAGCTCGATCAGGTCGACAC
CGAATCGAGAGGTTATCGATCGTCTGACACAACGGAGGGCGGATCTTCCA
AGGTCGAAGACGGTGATGAGCCTATCGAAGAGACCTCCAGGAGGGGCGTC
TCTCGCAACAAAAGTCATGGAACTCAACGCACAAATTTCTCGCGAAACAA
AAGCCATGCCAGTCACCGCACTGGCGTATCTCAAAATCAGAGTTATCGAA
GCCAGCCTCCCGCTACCCTGAGGAACCAAAGCTATGGGAGTCAAGCACAG
TTCTCCCTGGCAGGTCCGAATGCGTATTATGGACCACTACCTCAACAGGG
CGCCTACATGCATCCGGAGTATCAGTCATTTAATCCTCAATACGGAAACA
TGCAAGGGGACAAGCCTGTCTGGAGTCTAGCGCAGCCGCTGCCCCATGTT
GTCCGAGACGGAATGCGGTATGGAGCCTTGCCGGAGGATCGAAAGGAAGA
AAGAGACGAGGATGGACGAGAACGCCCGCCTCCAGCGTCAGAAGAGCCGC
CCACGGATATTCCGAAGACGGATGAAGCTAGAGAGAATGGCGAAGAGCCC
CAGAATGAGATGGGATTTTTCAATAAGTGGTCCAAGATTCGATATTATCT
GAGGGAGCCATTGGGCGAGTGGTTGGGGACAACCATCGCCATCACTCTCG
GTCTCTGCGGCGGGTTGTCAACCTACACATCGGACGGCCAAGCCGGCTCA
TGGATGACCCAGAGTGCCTGTTGGGGCTTCAGCTTCATGATCGGCATCTA
CATTGTTGGTGGCATCTCCGGTGGCCACCTCAATCCCGCCATCACAATCT
CCATGTCCCTCTGGCGAGGATTTCCCGCCCGCCGATGTGTTATTTACATC
CTCGCTCAGCTGATCGGCGCCATCACCGCCGGCGGATTCGCCTACGCCAT
TTACCACGACGCCATCGTCAACCTCTCCGTCGAGACCAACCTCCCACAAA
GCGAAACAACAGCTAGCCAAGCATTTCTAACTCTACCAAAACAATTCGTC
AGTCCAGCTACTGCATTCTTCAATGAGTTCCTAGGCACCGCTATTCTCGT
CGGAACCATCATGGCCTTGGGTGACGACACCAACGCCCCCCCAGGAGCAG
GAATGCAAGCATTCATCATCGGCATACTGATCACCGTATTAGTCCTTGCC
CTAGGATATAACACAGGCGGAGCATTCAACGGCCCCCGCGACTTCGGCCC
CCGGCTCGTCGCCGTAATGGCCGGGTGGGGCGGACACCTCTTCAAAGAGT
ACCATGCCTGGTGGATCTGGGGCCCTTGGGTCGCCGACATCTTCGGAGGA
TTGTTCGGGGCGTTCATCTACGATTTAGTGGTGTTCACTGGTGGCGAAAG
CCCGATCAATTACCCGCCGAGGAGACGCAAGCGCGCACTGCTGATCAAGG
AGAAGAATCTGAGAAGCAAGTTGCGTTTTGGGAGGAGGAAGATCGGGGAT
ATTGAGAGGGCAGTTGAGGAGAACCAGGATTGAATGGTGCACCCGGTTAG
GTCTCTCAACAAAGAGCTCGATCAGGTCGACACCGAATCGAGAGGTTATC
GATCGTCTGACACAACGGAGGGCGGATCTTCCAAGGTCGAAGACGGTGAT
GAGCCTATCGAAGAGACCTCCAGGAGGGGCGTCTCTCGCAACAAAAGTCA
TGGAACTCAACGCACAAATTTCTCGCGAAACAAAAGCCATGCCAGTCACC
GCACTGGCGTATCTCAAAATCAGAGTTATCGAAGCCAGCCTCCCGCTACC
CTGAGGAACCAAAGCTATGGGAGTCAAGCACAGTTCTCCCTGGCAGGTCC
GAATGCGTATTATGGACCACTACCTCAACAGGGCGCCTACATGCATCCGG
AGTATCAGTCATTTAATCCTCAATACGGAAACATGCAAGGGGACAAGCCT
GTCTGGAGTCTAGCGCAGCCGCTGCCCCATGTTGTCCGAGACGGAATGCG
GTATGGAGCCTTGCCGGAGGATCGAAAGGAAGAAAGAGACGAGGATGGAC
GAGAACGCCCGCCTCCAGCGTCAGAAGAGCCGCCCACGGATATTCCGAAG
ACGGATGAAGCTAGAGAGAATGGCGAAGAGCCCCAGAATGAGATGGGATT
TTTCAATAAGTGGTCCAAGATTCGATATTATCTGAGGGAGCCATTGGGCG
AGTGGTTGGGGACAACCATCGCCATCACTCTCGGTCTCTGCGGCGGGTTG
TCAACCTACACATCGGACGGCCAAGCCGGCTCATGGATGACCCAGAGTGC
CTGTTGGGGCTTCAGCTTCATGATCGGCATCTACATTGTTGGTGGCATCT
CCGGTGGCCACCTCAATCCCGCCATCACAATCTCCATGTCCCTCTGGCGA
GGATTTCCCGCCCGCCGATGTGTTATTTACATCCTCGCTCAGCTGATCGG
CGCCATCACCGCCGGCGGATTCGCCTACGCCATTTACCACGACGCCATCG
TCAACCTCTCCGTCGAGACCAACCTCCCACAAAGCGAAACAACAGCTAGC
CAAGCATTTCTAACTCTACCAAAACAATTCGTCAGTCCAGCTACTGCATT
CTTCAATGAGTTCCTAGGCACCGCTATTCTCGTCGGAACCATCATGGCCT
TGGGTGACGACACCAACGCCCCCCCAGGAGCAGGAATGCAAGCATTCATC
ATCGGCATACTGATCACCGTATTAGTCCTTGCCCTAGGATATAACACAGG
CGGAGCATTCAACGGCCCCCGCGACTTCGGCCCCCGGCTCGTCGCCGTAA
TGGCCGGGTGGGGCGGACACCTCTTCAAAGAGTACCATGCCTGGTGGATC
TGGGGCCCTTGGGTCGCCGACATCTTCGGAGGATTGTTCGGGGCGTTCAT
CTACGATTTAGTGGTGTTCACTGGTGGCGAAAGCCCGATCAATTACCCGC
CGAGGAGACGCAAGCGCGCACTGCTGATCAAGGAGAAGAATCTGAGAAGC
AAGTTGCGTTTTGGGAGGAGGAAGATCGGGGATATTGAGAGGGCAGTTGA
GGAGAACCAGGATTGAATGGTGCACCCGGTTAGGTCTCTCAACAAAGAGC
TCGATCAGGTCGACACCGAATCGAGAGGTTATCGATCGTCTGACACAACG
GAGGGCGGATCTTCCAAGGTCGAAGACGGTGATGAGCCTATCGAAGAGAC
CTCCAGGAGGGGCGTCTCTCGCAACAAAAGTCATGGAACTCAACGCACAA
ATTTCTCGCGAAACAAAAGCCATGCCAGTCACCGCACTGGCGTATCTCAA
AATCAGAGTTATCGAAGCCAGCCTCCCGCTACCCTGAGGAACCAAAGCTA
TGGGAGTCAAGCACAGTTCTCCCTGGCAGGTCCGAATGCGTATTATGGAC
CACTACCTCAACAGGGCGCCTACATGCATCCGGAGTATCAGTCATTTAAT
CCTCAATACGGAAACATGCAAGGGGACAAGCCTGTCTGGAGTCTAGCGCA
GCCGCTGCCCCATGTTGTCCGAGACGGAATGCGGTATGGAGCCTTGCCGG
AGGATCGAAAGGAAGAAAGAGACGAGGATGGACGAGAACGCCCGCCTCCA
GCGTCAGAAGAGCCGCCCACGGATATTCCGAAGACGGATGAAGCTAGAGA
GAATGGCGAAGAGCCCCAGAATGAGATGGGATTTTTCAATAAGTGGTCCA
AGATTCGATATTATCTGAGGGAGCCATTGGGCGAGTGGTTGGGGACAACC
ATCGCCATCACTCTCGGTCTCTGCGGCGGGTTGTCAACCTACACATCGGA
CGGCCAAGCCGGCTCATGGATGACCCAGAGTGCCTGTTGGGGCTTCAGCT
TCATGATCGGCATCTACATTGTTGGTGGCATCTCCGGTGGCCACCTCAAT
CCCGCCATCACAATCTCCATGTCCCTCTGGCGAGGATTTCCCGCCCGCCG
ATGTGTTATTTACATCCTCGCTCAGCTGATCGGCGCCATCACCGCCGGCG
GATTCGCCTACGCCATTTACCACGACGCCATCGTCAACCTCTCCGTCGAG
ACCAACCTCCCACAAAGCGAAACAACAGCTAGCCAAGCATTTCTAACTCT
ACCAAAACAATTCGTCAGTCCAGCTACTGCATTCTTCAATGAGTTCCTAG
GCACCGCTATTCTCGTCGGAACCATCATGGCCTTGGGTGACGACACCAAC
GCCCCCCCAGGAGCAGGAATGCAAGCATTCATCATCGGCATACTGATCAC
CGTATTAGTCCTTGCCCTAGGATATAACACAGGCGGAGCATTCAACGGCC
CCCGCGACTTCGGCCCCCGGCTCGTCGCCGTAATGGCCGGGTGGGGCGGA
CACCTCTTCAAAGAGTACCATGCCTGGTGGATCTGGGGCCCTTGGGTCGC
CGACATCTTCGGAGGATTGTTCGGGGCGTTCATCTACGATTTAGTGGTGT
TCACTGGTGGCGAAAGCCCGATCAATTACCCGCCGAGGAGACGCAAGCGC
GCACTGCTGATCAAGGAGAAGAATCTGAGAAGCAAGTTGCGTTTTGGGAG
GAGGAAGATCGGGGATATTGAGAGGGCAGTTGAGGAGAACCAGGATTGAA
TGGTGCACCCGGTTAGGTCTCTCAACAAAGAGCTCGATCAGGTCGACACC
GAATCGAGAGGTTATCGATCGTCTGACACAACGGAGGGCGGATCTTCCAA
GGTCGAAGACGGTGATGAGCCTATCGAAGAGACCTCCAGGAGGGGCGTCT
CTCGCAACAAAAGTCATGGAACTCAACGCACAAATTTCTCGCGAAACAAA
AGCCATGCCAGTCACCGCACTGGCGTATCTCAAAATCAGAGTTATCGAAG
CCAGCCTCCCGCTACCCTGAGGAACCAAAGCTATGGGAGTCAAGCACAGT
TCTCCCTGGCAGGTCCGAATGCGTATTATGGACCACTACCTCAACAGGGC
GCCTACATGCATCCGGAGTATCAGTCATTTAATCCTCAATACGGAAACAT
GCAAGGGGACAAGCCTGTCTGGAGTCTAGCGCAGCCGCTGCCCCATGTTG
TCCGAGACGGAATGCGGTATGGAGCCTTGCCGGAGGATCGAAAGGAAGAA
AGAGACGAGGATGGACGAGAACGCCCGCCTCCAGCGTCAGAAGAGCCGCC
CACGGATATTCCGAAGACGGATGAAGCTAGAGAGAATGGCGAAGAGCCCC
AGAATGAGATGGGATTTTTCAATAAGTGGTCCAAGATTCGATATTATCTG
AGGGAGCCATTGGGCGAGTGGTTGGGGACAACCATCGCCATCACTCTCGG
TCTCTGCGGCGGGTTGTCAACCTACACATCGGACGGCCAAGCCGGCTCAT
GGATGACCCAGAGTGCCTGTTGGGGCTTCAGCTTCATGATCGGCATCTAC
ATTGTTGGTGGCATCTCCGGTGGCCACCTCAATCCCGCCATCACAATCTC
CATGTCCCTCTGGCGAGGATTTCCCGCCCGCCGATGTGTTATTTACATCC
TCGCTCAGCTGATCGGCGCCATCACCGCCGGCGGATTCGCCTACGCCATT
TACCACGACGCCATCGTCAACCTCTCCGTCGAGACCAACCTCCCACAAAG
CGAAACAACAGCTAGCCAAGCATTTCTAACTCTACCAAAACAATTCGTCA
GTCCAGCTACTGCATTCTTCAATGAGTTCCTAGGCACCGCTATTCTCGTC
GGAACCATCATGGCCTTGGGTGACGACACCAACGCCCCCCCAGGAGCAGG
AATGCAAGCATTCATCATCGGCATACTGATCACCGTATTAGTCCTTGCCC
TAGGATATAACACAGGCGGAGCATTCAACGGCCCCCGCGACTTCGGCCCC
CGGCTCGTCGCCGTAATGGCCGGGTGGGGCGGACACCTCTTCAAAGAGTA
CCATGCCTGGTGGATCTGGGGCCCTTGGGTCGCCGACATCTTCGGAGGAT
TGTTCGGGGCGTTCATCTACGATTTAGTGGTGTTCACTGGTGGCGAAAGC
CCGATCAATTACCCGCCGAGGAGACGCAAGCGCGCACTGCTGATCAAGGA
GAAGAATCTGAGAAGCAAGTTGCGTTTTGGGAGGAGGAAGATCGGGGATA
TTGAGAGGGCAGTTGAGGAGAACCAGGATTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0015267channel activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_25380ATCC64974_25380Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_25380-T1.exon1ATCC64974_25380-T1.exon1Aspergillus niger N402exon
ATCC64974_25380-T1.exon2ATCC64974_25380-T1.exon2Aspergillus niger N402exon
ATCC64974_25380-T1.exon3ATCC64974_25380-T1.exon3Aspergillus niger N402exon
ATCC64974_25380-T1.exon4ATCC64974_25380-T1.exon4Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_25380-T1.cdsATCC64974_25380-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_25380-T1ATCC64974_25380-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR022357
DBxrefInterPro:IPR023271
DBxrefInterPro:IPR000425
DBxrefPFAM:PF00230
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000003.1supercontigOGUI01000003.1:4442003..4443696 +
Powered by Drupal