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ATCC64974_25540-T1, ATCC64974_25540-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_25540-T1
Unique NameATCC64974_25540-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000003.1:4491812..4492711+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_25540-T1 ID=ATCC64974_25540-T1|Name=ATCC64974_25540-T1|organism=Aspergillus niger N402|type=mRNA|length=900bp|location=Sequence derived from alignment at OGUI01000003.1:4491812..4492711+ (Aspergillus niger N402)
ATGAGCGCAAACCGTGGCGCCAAAATCGTCCTTAACTGGTACATCTCTTC
CCATCCCCCCTTGATACCCCACCACGACTAACAAACCAACAGGCTCGAGC
GCTCCCGCGCCCAACGCATCGCCTGGCTAATGGAGGAGCTACACCTCGAC
TACTCCATCCAGCCCTTCAAGCGCAACCCAACAGGCACTGCACCAGCAGA
ACTGAAGAAAATCCACCCACTGGGAAAGTCACCCACCATTTCCATCCAGC
CGCCCTCTCCCACCTCCAAACCGATTATACTGGCCGAGACGACCCCAATC
ATGAGTTACCTAGTCGAGCATTTCGCCGACGAAGCCACCGGCGCCAAACT
CATTCCCAGGAAATACGAGCCCGGAAAGGAGCGAGAGCTAGGCGGCGAAA
CAGAGGCATGGATGCGGTATCAATATTACAACAGCTATGTGGAGGGTAGT
TTGATGAGTGTTTTGCAGGTAAAATTGGTTTTTGATGGTGAGCAAGCAGA
TTCCCCAACTCCACAATTCCCCCTGTAATTGGTGGTATACTGATAAATAA
TAGCGTTGCAAAATGCTCCCATCCCATTCTTCCTCAAGCCCATCATAAAT
TTCATCGCATCGAAAGTCAACTCCGAGTTCCTGGACCAGGAGTTCAAGAC
TCATTATGGGTTCCTGGAAGAACAGCTTGCCACGGCTCCTGACGGGGGAC
CGTATATTTGTGGGAAAGATCTCAGTCTTGCGGACATTCAGTTGAGCTTG
CCGGTGTTTATGGGGTTGATGTTGGGGGCTATATCGAAGAGTGAATATCC
GCTGTTACATGGGTATGCAGAGAGACTGAAGCGGGAGCAGGGGTATAGGA
GGGTGGTGGAGAGAGCAGCAGAGGTTGGGGAGGGGGCTATGTTGGAGTAG
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Coding sequence (CDS) from alignment at OGUI01000003.1:4491812..4492711+

>ATCC64974_25540-T1 ID=ATCC64974_25540-T1|Name=ATCC64974_25540-T1|organism=Aspergillus niger N402|type=CDS|length=2340bp|location=Sequence derived from alignment at OGUI01000003.1:4491812..4492711+ (Aspergillus niger N402)
ATGAGCGCAAACCGTGGCGCCAAAATCGTCCTTAACTGGCTCGAGCGCTC
CCGCGCCCAACGCATCGCCTGGCTAATGGAGGAGCTACACCTCGACTACT
CCATCCAGCCCTTCAAGCGCAACCCAACAGGCACTGCACCAGCAGAACTG
AAGAAAATCCACCCACTGGGAAAGTCACCCACCATTTCCATCCAGCCGCC
CTCTCCCACCTCCAAACCGATTATACTGGCCGAGACGACCCCAATCATGA
GTTACCTAGTCGAGCATTTCGCCGACGAAGCCACCGGCGCCAAACTCATT
CCCAGGAAATACGAGCCCGGAAAGGAGCGAGAGCTAGGCGGCGAAACAGA
GGCATGGATGCGGTATCAATATTACAACAGCTATGTGGAGGGTAGTTTGA
TGAGTGTTTTGCAGGTAAAATTGGTTTTTGATGCGTTGCAAAATGCTCCC
ATCCCATTCTTCCTCAAGCCCATCATAAATTTCATCGCATCGAAAGTCAA
CTCCGAGTTCCTGGACCAGGAGTTCAAGACTCATTATGGGTTCCTGGAAG
AACAGCTTGCCACGGCTCCTGACGGGGGACCGTATATTTGTGGGAAAGAT
CTCAGTCTTGCGGACATTCAGTTGAGCTTGCCGGTGTTTATGGGGTTGAT
GTTGGGGGCTATATCGAAGAGTGAATATCCGCTGTTACATGGGTATGCAG
AGAGACTGAAGCGGGAGCAGGGGTATAGGAGGGTGGTGGAGAGAGCAGCA
GAGGTTGGGGAGGGGGCTATGTTGGAGTAGATGAGCGCAAACCGTGGCGC
CAAAATCGTCCTTAACTGGCTCGAGCGCTCCCGCGCCCAACGCATCGCCT
GGCTAATGGAGGAGCTACACCTCGACTACTCCATCCAGCCCTTCAAGCGC
AACCCAACAGGCACTGCACCAGCAGAACTGAAGAAAATCCACCCACTGGG
AAAGTCACCCACCATTTCCATCCAGCCGCCCTCTCCCACCTCCAAACCGA
TTATACTGGCCGAGACGACCCCAATCATGAGTTACCTAGTCGAGCATTTC
GCCGACGAAGCCACCGGCGCCAAACTCATTCCCAGGAAATACGAGCCCGG
AAAGGAGCGAGAGCTAGGCGGCGAAACAGAGGCATGGATGCGGTATCAAT
ATTACAACAGCTATGTGGAGGGTAGTTTGATGAGTGTTTTGCAGGTAAAA
TTGGTTTTTGATGCGTTGCAAAATGCTCCCATCCCATTCTTCCTCAAGCC
CATCATAAATTTCATCGCATCGAAAGTCAACTCCGAGTTCCTGGACCAGG
AGTTCAAGACTCATTATGGGTTCCTGGAAGAACAGCTTGCCACGGCTCCT
GACGGGGGACCGTATATTTGTGGGAAAGATCTCAGTCTTGCGGACATTCA
GTTGAGCTTGCCGGTGTTTATGGGGTTGATGTTGGGGGCTATATCGAAGA
GTGAATATCCGCTGTTACATGGGTATGCAGAGAGACTGAAGCGGGAGCAG
GGGTATAGGAGGGTGGTGGAGAGAGCAGCAGAGGTTGGGGAGGGGGCTAT
GTTGGAGTAGATGAGCGCAAACCGTGGCGCCAAAATCGTCCTTAACTGGC
TCGAGCGCTCCCGCGCCCAACGCATCGCCTGGCTAATGGAGGAGCTACAC
CTCGACTACTCCATCCAGCCCTTCAAGCGCAACCCAACAGGCACTGCACC
AGCAGAACTGAAGAAAATCCACCCACTGGGAAAGTCACCCACCATTTCCA
TCCAGCCGCCCTCTCCCACCTCCAAACCGATTATACTGGCCGAGACGACC
CCAATCATGAGTTACCTAGTCGAGCATTTCGCCGACGAAGCCACCGGCGC
CAAACTCATTCCCAGGAAATACGAGCCCGGAAAGGAGCGAGAGCTAGGCG
GCGAAACAGAGGCATGGATGCGGTATCAATATTACAACAGCTATGTGGAG
GGTAGTTTGATGAGTGTTTTGCAGGTAAAATTGGTTTTTGATGCGTTGCA
AAATGCTCCCATCCCATTCTTCCTCAAGCCCATCATAAATTTCATCGCAT
CGAAAGTCAACTCCGAGTTCCTGGACCAGGAGTTCAAGACTCATTATGGG
TTCCTGGAAGAACAGCTTGCCACGGCTCCTGACGGGGGACCGTATATTTG
TGGGAAAGATCTCAGTCTTGCGGACATTCAGTTGAGCTTGCCGGTGTTTA
TGGGGTTGATGTTGGGGGCTATATCGAAGAGTGAATATCCGCTGTTACAT
GGGTATGCAGAGAGACTGAAGCGGGAGCAGGGGTATAGGAGGGTGGTGGA
GAGAGCAGCAGAGGTTGGGGAGGGGGCTATGTTGGAGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_25540ATCC64974_25540Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_25540-T1.exon1ATCC64974_25540-T1.exon1Aspergillus niger N402exon
ATCC64974_25540-T1.exon2ATCC64974_25540-T1.exon2Aspergillus niger N402exon
ATCC64974_25540-T1.exon3ATCC64974_25540-T1.exon3Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_25540-T1.cdsATCC64974_25540-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_25540-T1ATCC64974_25540-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_10000031.11
NoteantiSMASH:Cluster_10000031.10
NoteSMCOG1193:glutathione S-transferase
DBxrefInterPro:IPR036282
DBxrefInterPro:IPR036249
DBxrefInterPro:IPR010987
DBxrefInterPro:IPR040079
DBxrefInterPro:IPR004046
DBxrefInterPro:IPR004045
DBxrefPFAM:PF13417
DBxrefPFAM:PF13409
DBxrefPFAM:PF02798
DBxrefPFAM:PF14497
DBxrefPFAM:PF00043
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000003.1supercontigOGUI01000003.1:4491812..4492711 +
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