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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000003.1:4702856..4704649- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_26160-T1 ID=ATCC64974_26160-T1|Name=ATCC64974_26160-T1|organism=Aspergillus niger N402|type=mRNA|length=1794bp|location=Sequence derived from alignment at OGUI01000003.1:4702856..4704649- (Aspergillus niger N402)
ATGGCTAAGATCCCTCACTGGCGTCTGATTGTCGACCAGAGTGTCGTCAC
TCAGGAGATCATCGACTATCCCTATGCCGGCTCAGGGACCGAATCCGATC
CATTCATCGTAGAATGGATTCCCAATGACCCGCGTAACCCCATGCATTTT
AACAAGAACATGAAATGGGTCTACACCATCATTGCCGCGTTCGCGACCTT
TGGCGTTTCCATGGCCTCGTCGGCCTATGCGGGCAGTATCGACCAAGTGA
TTGAGCACTTTAACATCGGCACGGAGGTAGCCACCCTGGGTGTTTCACTG
TTCGTGCTTGGATTTGCTATTGGACCCCTCGTCTGGGCACCGCTGAGTGA
ACTCATTGGACGCCAACTCGTTTTCTTCGTCTCCTACATGGGCCTGGCTG
TATTCAGTGCTGGTGCAACAGGCTCGAAAAACCCATGGACAATCATCATT
CTACGCTTCTTTGCTGGCTCATTCGGATCCAGTCCTTTAACCAACGCCGG
TGGACTAATTGCTGACGTCTTCCCCGCTGAACAGCGAGGATTGGCCATGA
GTGTCTTCGCGGGTAGTCCCTTCCTCGGACCGACCCTTGGCCCCGTCATC
GGCGGTTTCCTGGGCCAAAGCGCAGGTTGGCAATGGGTGGAAGGCTTCTT
AGCAGCCTTTACTGGCTTTATCTGGATCGTTCAGTTTCTCCTTGTTCCCG
AAACATACGCCCCAGTCCTCCTCCGCAAGCGCGCCGACCGTCTCAGCAAG
CTCACCGGCAAGACATATATCAGCAAACTCGACGTCGAGCGTGGCCGTGT
CTCTGTGACCAGCGCCTTCGGAGCGGCACTCCTGCGCCCATGGATCCTCC
TTTTCGCCGAGCCCATCGTCTTCCTTCTCTCGCTATACATGGCCATCGTC
TACGGCACGCTGTACATGCTCTTCGACGCCTTCCCGATCGTTTACCAACA
ACTGCGCGGCTGGAACGAAGGAGTAGGCAGTCTGCCCTTCTTGGGAGTCA
TGGTCGGAATGATGTCAGCTGTGGGATACAATATGTGGGACAACAAGCGG
TATAAGAGGGTGCACGAGAAACACCGTGGGTTCGCACCGCCTGAGGCCCG
CCTCCCTCCCTCTATGATTGGGAGTATCACTATTCCCATTGGTCTGTTCT
GGTTCGCCTGGACGAACGGTCTCAACGTCCACTGGATCGTCAGTATCATT
GCGTCTGCTCCGTTCGGATTCGGTATGGTCCTTGTTTTCTTGAACATCAT
GTCATACCTGATTGATGCGTACACGATCTATGCTGCCTCGGTTTTGGCCG
CCAATTCCATCATTCGAAGCTGCTTCGGTGCAGGCTTCCCTCTCTTCACA
ACATACATGTACCAGAACCTAGGTATTCATTGGGCATCTTCCATCCCGGC
TTTCTTATCGGTCGCCTGCTTGCCTTTCCCGTTCATCTTTTATAAGTATG
GTGCCGCTATTCGACGCAAGTGCAAGTATGCTGGAGAAGCGGACGCATTC
ATGAAGAAACTCGCTGAGAAGTCTTTGAACCCGGAGAAGAGCCAGGAAGT
TGTGGAGGAAGAGGCTGAAGCCGTTGCTGATGGCGTGGATGAGACCCGAG
TCGATCGAGAGTTGGACCTTGAGCGCGCCGAGTCGGTGGCTACGGCATCG
GTGTCGAGTGATGACCGTGAAGGTCGGAAGTATGAGGCGAACCCGTACGA
TATCGATCGGGTCAACACGAGAAACTCGGCGATCACCCAGAGATCGAGGT
CGCGGTCGGTCAAGTCGAAGCGGAAGAAGTTCCTCGGTTTCTAA back to topCoding sequence (CDS) from alignment at OGUI01000003.1:4702856..4704649- >ATCC64974_26160-T1 ID=ATCC64974_26160-T1|Name=ATCC64974_26160-T1|organism=Aspergillus niger N402|type=CDS|length=1794bp|location=Sequence derived from alignment at OGUI01000003.1:4702856..4704649- (Aspergillus niger N402)
ATGGCTAAGATCCCTCACTGGCGTCTGATTGTCGACCAGAGTGTCGTCAC
TCAGGAGATCATCGACTATCCCTATGCCGGCTCAGGGACCGAATCCGATC
CATTCATCGTAGAATGGATTCCCAATGACCCGCGTAACCCCATGCATTTT
AACAAGAACATGAAATGGGTCTACACCATCATTGCCGCGTTCGCGACCTT
TGGCGTTTCCATGGCCTCGTCGGCCTATGCGGGCAGTATCGACCAAGTGA
TTGAGCACTTTAACATCGGCACGGAGGTAGCCACCCTGGGTGTTTCACTG
TTCGTGCTTGGATTTGCTATTGGACCCCTCGTCTGGGCACCGCTGAGTGA
ACTCATTGGACGCCAACTCGTTTTCTTCGTCTCCTACATGGGCCTGGCTG
TATTCAGTGCTGGTGCAACAGGCTCGAAAAACCCATGGACAATCATCATT
CTACGCTTCTTTGCTGGCTCATTCGGATCCAGTCCTTTAACCAACGCCGG
TGGACTAATTGCTGACGTCTTCCCCGCTGAACAGCGAGGATTGGCCATGA
GTGTCTTCGCGGGTAGTCCCTTCCTCGGACCGACCCTTGGCCCCGTCATC
GGCGGTTTCCTGGGCCAAAGCGCAGGTTGGCAATGGGTGGAAGGCTTCTT
AGCAGCCTTTACTGGCTTTATCTGGATCGTTCAGTTTCTCCTTGTTCCCG
AAACATACGCCCCAGTCCTCCTCCGCAAGCGCGCCGACCGTCTCAGCAAG
CTCACCGGCAAGACATATATCAGCAAACTCGACGTCGAGCGTGGCCGTGT
CTCTGTGACCAGCGCCTTCGGAGCGGCACTCCTGCGCCCATGGATCCTCC
TTTTCGCCGAGCCCATCGTCTTCCTTCTCTCGCTATACATGGCCATCGTC
TACGGCACGCTGTACATGCTCTTCGACGCCTTCCCGATCGTTTACCAACA
ACTGCGCGGCTGGAACGAAGGAGTAGGCAGTCTGCCCTTCTTGGGAGTCA
TGGTCGGAATGATGTCAGCTGTGGGATACAATATGTGGGACAACAAGCGG
TATAAGAGGGTGCACGAGAAACACCGTGGGTTCGCACCGCCTGAGGCCCG
CCTCCCTCCCTCTATGATTGGGAGTATCACTATTCCCATTGGTCTGTTCT
GGTTCGCCTGGACGAACGGTCTCAACGTCCACTGGATCGTCAGTATCATT
GCGTCTGCTCCGTTCGGATTCGGTATGGTCCTTGTTTTCTTGAACATCAT
GTCATACCTGATTGATGCGTACACGATCTATGCTGCCTCGGTTTTGGCCG
CCAATTCCATCATTCGAAGCTGCTTCGGTGCAGGCTTCCCTCTCTTCACA
ACATACATGTACCAGAACCTAGGTATTCATTGGGCATCTTCCATCCCGGC
TTTCTTATCGGTCGCCTGCTTGCCTTTCCCGTTCATCTTTTATAAGTATG
GTGCCGCTATTCGACGCAAGTGCAAGTATGCTGGAGAAGCGGACGCATTC
ATGAAGAAACTCGCTGAGAAGTCTTTGAACCCGGAGAAGAGCCAGGAAGT
TGTGGAGGAAGAGGCTGAAGCCGTTGCTGATGGCGTGGATGAGACCCGAG
TCGATCGAGAGTTGGACCTTGAGCGCGCCGAGTCGGTGGCTACGGCATCG
GTGTCGAGTGATGACCGTGAAGGTCGGAAGTATGAGGCGAACCCGTACGA
TATCGATCGGGTCAACACGAGAAACTCGGCGATCACCCAGAGATCGAGGT
CGCGGTCGGTCAAGTCGAAGCGGAAGAAGTTCCTCGGTTTCTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005887 | integral component of plasma membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_26160-T1 | ATCC64974_26160-T1-protein | Aspergillus niger N402 | polypeptide |
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000003.1 | supercontig | OGUI01000003.1:4702856..4704649 - |
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