You are here

Home

ATCC64974_26810-T1, ATCC64974_26810-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_26810-T1
Unique NameATCC64974_26810-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000004.1:72854..73732+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_26810-T1 ID=ATCC64974_26810-T1|Name=ATCC64974_26810-T1|organism=Aspergillus niger N402|type=mRNA|length=879bp|location=Sequence derived from alignment at OGUI01000004.1:72854..73732+ (Aspergillus niger N402)
ATGCGCTTCGCAATCACCGCCGCCTCGCTGAGCCTCGTCTCTTCGGCTTT
GGCCATCACCATCACCCAGCCCACCTCAGGCACCGAGTGGGATTTCTCCA
CTCCGAAGACTATCAAGTTCACCAGCGATGCGAATGATCCGTCAGTGATC
AGCATCATCTTGCGCACTCAGGATGGATCCTTCCAGACCAAGCTGGCGGA
CAACGTAAAGACTTCCACGGGGGAATACACTACCCAGCCCAACCCTAGCA
TTTCCAACGGGTACGTACCCTAGATCTTAGTGGACTCACCGATAGTTGAA
AGGGGGAACGCTACTAACTTTGTGTTTCTGATCCTAGGTCTGACTATGAA
ATCGAGATCATCGACTCTTCGGGCGAGCTCGCTGTGAGCCCGACTTTTAC
TGTCGAAAAGGGTGCTTCGACCGATGGTACTACTTCCTCCTCATCAGCTT
CTTCCACATCCACTACATCTTCTTCCTCTTCCTCTTCTTCTTCCTCCACC
ACCACTTCCTCCTCTTCGACATCCAGTGAGACCGAATCCACCACAGTCAC
CTCTACGACTGCGGTGTCTTCGACATCTACCTCGTCGAGCAGTCCTCTGT
CTTCATCTTCAGGCAAGATGTCATTTCGTCATTGTGGCACGGCGACCTCA
CTGACCGAAGCTTGATTTTTCTACAGGATCGGCCACCTCTACCTCCACGT
CTTCGTCGTCTTCTACGGGCACTACGCTCGCCACATCTGCGTCTTCTACC
TCGAGCTCAAACAGCACTGCCACCACATCCACCGCTCAGCTATCCACCGG
CGCGGCTTCGTCTACATTTAATGCTCCCCAGGGAGTCGTGGCTCTGCTTG
GTGCTGCTTTGGCGCTTCTCTACGTCTGA
back to top

Coding sequence (CDS) from alignment at OGUI01000004.1:72854..73732+

>ATCC64974_26810-T1 ID=ATCC64974_26810-T1|Name=ATCC64974_26810-T1|organism=Aspergillus niger N402|type=CDS|length=2214bp|location=Sequence derived from alignment at OGUI01000004.1:72854..73732+ (Aspergillus niger N402)
ATGCGCTTCGCAATCACCGCCGCCTCGCTGAGCCTCGTCTCTTCGGCTTT
GGCCATCACCATCACCCAGCCCACCTCAGGCACCGAGTGGGATTTCTCCA
CTCCGAAGACTATCAAGTTCACCAGCGATGCGAATGATCCGTCAGTGATC
AGCATCATCTTGCGCACTCAGGATGGATCCTTCCAGACCAAGCTGGCGGA
CAACGTAAAGACTTCCACGGGGGAATACACTACCCAGCCCAACCCTAGCA
TTTCCAACGGGTCTGACTATGAAATCGAGATCATCGACTCTTCGGGCGAG
CTCGCTGTGAGCCCGACTTTTACTGTCGAAAAGGGTGCTTCGACCGATGG
TACTACTTCCTCCTCATCAGCTTCTTCCACATCCACTACATCTTCTTCCT
CTTCCTCTTCTTCTTCCTCCACCACCACTTCCTCCTCTTCGACATCCAGT
GAGACCGAATCCACCACAGTCACCTCTACGACTGCGGTGTCTTCGACATC
TACCTCGTCGAGCAGTCCTCTGTCTTCATCTTCAGGATCGGCCACCTCTA
CCTCCACGTCTTCGTCGTCTTCTACGGGCACTACGCTCGCCACATCTGCG
TCTTCTACCTCGAGCTCAAACAGCACTGCCACCACATCCACCGCTCAGCT
ATCCACCGGCGCGGCTTCGTCTACATTTAATGCTCCCCAGGGAGTCGTGG
CTCTGCTTGGTGCTGCTTTGGCGCTTCTCTACGTCTGAATGCGCTTCGCA
ATCACCGCCGCCTCGCTGAGCCTCGTCTCTTCGGCTTTGGCCATCACCAT
CACCCAGCCCACCTCAGGCACCGAGTGGGATTTCTCCACTCCGAAGACTA
TCAAGTTCACCAGCGATGCGAATGATCCGTCAGTGATCAGCATCATCTTG
CGCACTCAGGATGGATCCTTCCAGACCAAGCTGGCGGACAACGTAAAGAC
TTCCACGGGGGAATACACTACCCAGCCCAACCCTAGCATTTCCAACGGGT
CTGACTATGAAATCGAGATCATCGACTCTTCGGGCGAGCTCGCTGTGAGC
CCGACTTTTACTGTCGAAAAGGGTGCTTCGACCGATGGTACTACTTCCTC
CTCATCAGCTTCTTCCACATCCACTACATCTTCTTCCTCTTCCTCTTCTT
CTTCCTCCACCACCACTTCCTCCTCTTCGACATCCAGTGAGACCGAATCC
ACCACAGTCACCTCTACGACTGCGGTGTCTTCGACATCTACCTCGTCGAG
CAGTCCTCTGTCTTCATCTTCAGGATCGGCCACCTCTACCTCCACGTCTT
CGTCGTCTTCTACGGGCACTACGCTCGCCACATCTGCGTCTTCTACCTCG
AGCTCAAACAGCACTGCCACCACATCCACCGCTCAGCTATCCACCGGCGC
GGCTTCGTCTACATTTAATGCTCCCCAGGGAGTCGTGGCTCTGCTTGGTG
CTGCTTTGGCGCTTCTCTACGTCTGAATGCGCTTCGCAATCACCGCCGCC
TCGCTGAGCCTCGTCTCTTCGGCTTTGGCCATCACCATCACCCAGCCCAC
CTCAGGCACCGAGTGGGATTTCTCCACTCCGAAGACTATCAAGTTCACCA
GCGATGCGAATGATCCGTCAGTGATCAGCATCATCTTGCGCACTCAGGAT
GGATCCTTCCAGACCAAGCTGGCGGACAACGTAAAGACTTCCACGGGGGA
ATACACTACCCAGCCCAACCCTAGCATTTCCAACGGGTCTGACTATGAAA
TCGAGATCATCGACTCTTCGGGCGAGCTCGCTGTGAGCCCGACTTTTACT
GTCGAAAAGGGTGCTTCGACCGATGGTACTACTTCCTCCTCATCAGCTTC
TTCCACATCCACTACATCTTCTTCCTCTTCCTCTTCTTCTTCCTCCACCA
CCACTTCCTCCTCTTCGACATCCAGTGAGACCGAATCCACCACAGTCACC
TCTACGACTGCGGTGTCTTCGACATCTACCTCGTCGAGCAGTCCTCTGTC
TTCATCTTCAGGATCGGCCACCTCTACCTCCACGTCTTCGTCGTCTTCTA
CGGGCACTACGCTCGCCACATCTGCGTCTTCTACCTCGAGCTCAAACAGC
ACTGCCACCACATCCACCGCTCAGCTATCCACCGGCGCGGCTTCGTCTAC
ATTTAATGCTCCCCAGGGAGTCGTGGCTCTGCTTGGTGCTGCTTTGGCGC
TTCTCTACGTCTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_26810ATCC64974_26810Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_26810-T1.exon1ATCC64974_26810-T1.exon1Aspergillus niger N402exon
ATCC64974_26810-T1.exon2ATCC64974_26810-T1.exon2Aspergillus niger N402exon
ATCC64974_26810-T1.exon3ATCC64974_26810-T1.exon3Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_26810-T1.cdsATCC64974_26810-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_26810-T1ATCC64974_26810-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
NoteSECRETED:SignalP(1-18)
DBxrefInterPro:IPR018466
DBxrefPFAM:PF10342
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000004.1supercontigOGUI01000004.1:72854..73732 +
Powered by Drupal