|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000004.1:76710..77717- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_26820-T1 ID=ATCC64974_26820-T1|Name=ATCC64974_26820-T1|organism=Aspergillus niger N402|type=mRNA|length=1008bp|location=Sequence derived from alignment at OGUI01000004.1:76710..77717- (Aspergillus niger N402)
ATGTTCGCCAAACTGTCCCTCCTTTCTCTTCTTTTCAGCTCTGCTGCGCT
GGGCGCTTCCAACCAGACTCTGTCCTATGGCAACATTGACAAGTCGGCCA
CCCCCGAAGCCAGGGCGCTCCTGAAGTACATCCAGCTTCAGTACGGCTCG
CACTACATCTCGGGCCAGCAGGACATTGACAGCTGGAACTGGGTCGAGAA
GAACATTGGTGTGGCCCCTGCGATTCTCGGCAGTGACTTCACCTACTACT
CGCCTTCGGCTGTTGCTCACGGCGGCAAGTCTCACGCCGTCGAGGATGTG
ATTCAGCACGCCGGCCGCAATGGAATCAATGCCCTGGTGTGGCATTGGTA
CGCTCCCACCTGCCTGCTCGATACCGCCAAGGAGCCGTGGTACAAGGGGT
TCTACACCGAAGCCACCTGCTTCAACGTGTCTGAAGCCGTCAACGACCAT
GGCAACGGCACCAACTACAAGCTTCTGCTGCGTGATATCGACGCCATCGC
TGCTCAGATCAAGCGTCTGGATCAGGCCAAAGTGCCCATCCTCTTCCGCC
CGCTCCACGAGCCCGAGGGTGGCTGGTTCTGGTGGGGTGCCCAGGGTCCT
GCTCCCTTCAAGAAGCTGTGGGATATCCTCTACGACCGCATCACTCGCTA
CCACAACCTCCACAACATGGTCTGGGTTTGCAACACTGCTGATCCAGCGT
GGTATCCCGGAAACGACAAGTGTGACATTGCCACCATCGATCACTATCCC
GCCGTTGGTGACCACGGAGTCGCGGCCGACCAGTACAAGAAGCTCCAGAC
CCTTACCAACAACGAGAGAGTTTTGGCTATGGCAGAAGTCGGTCCCATTC
CGGACCCCGATAAGCAGGCTAGTGAGAACGTCAACTGGGCTTACTGGATG
GTTTGGTCTGGTGACTTCATCGAGGATGGCAAGCAGAACCCTAACCAGTT
CCTGCACAAGGTGTACAACGACACCCGTGTTGTGGCTCTGAACTGGGAGG
GGGCTTAA back to topCoding sequence (CDS) from alignment at OGUI01000004.1:76710..77717- >ATCC64974_26820-T1 ID=ATCC64974_26820-T1|Name=ATCC64974_26820-T1|organism=Aspergillus niger N402|type=CDS|length=1008bp|location=Sequence derived from alignment at OGUI01000004.1:76710..77717- (Aspergillus niger N402)
ATGTTCGCCAAACTGTCCCTCCTTTCTCTTCTTTTCAGCTCTGCTGCGCT
GGGCGCTTCCAACCAGACTCTGTCCTATGGCAACATTGACAAGTCGGCCA
CCCCCGAAGCCAGGGCGCTCCTGAAGTACATCCAGCTTCAGTACGGCTCG
CACTACATCTCGGGCCAGCAGGACATTGACAGCTGGAACTGGGTCGAGAA
GAACATTGGTGTGGCCCCTGCGATTCTCGGCAGTGACTTCACCTACTACT
CGCCTTCGGCTGTTGCTCACGGCGGCAAGTCTCACGCCGTCGAGGATGTG
ATTCAGCACGCCGGCCGCAATGGAATCAATGCCCTGGTGTGGCATTGGTA
CGCTCCCACCTGCCTGCTCGATACCGCCAAGGAGCCGTGGTACAAGGGGT
TCTACACCGAAGCCACCTGCTTCAACGTGTCTGAAGCCGTCAACGACCAT
GGCAACGGCACCAACTACAAGCTTCTGCTGCGTGATATCGACGCCATCGC
TGCTCAGATCAAGCGTCTGGATCAGGCCAAAGTGCCCATCCTCTTCCGCC
CGCTCCACGAGCCCGAGGGTGGCTGGTTCTGGTGGGGTGCCCAGGGTCCT
GCTCCCTTCAAGAAGCTGTGGGATATCCTCTACGACCGCATCACTCGCTA
CCACAACCTCCACAACATGGTCTGGGTTTGCAACACTGCTGATCCAGCGT
GGTATCCCGGAAACGACAAGTGTGACATTGCCACCATCGATCACTATCCC
GCCGTTGGTGACCACGGAGTCGCGGCCGACCAGTACAAGAAGCTCCAGAC
CCTTACCAACAACGAGAGAGTTTTGGCTATGGCAGAAGTCGGTCCCATTC
CGGACCCCGATAAGCAGGCTAGTGAGAACGTCAACTGGGCTTACTGGATG
GTTTGGTCTGGTGACTTCATCGAGGATGGCAAGCAGAACCCTAACCAGTT
CCTGCACAAGGTGTACAACGACACCCGTGTTGTGGCTCTGAACTGGGAGG
GGGCTTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0016985 | mannan endo-1,4-beta-mannosidase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006080 | substituted mannan metabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_26820-T1 | ATCC64974_26820-T1-protein | Aspergillus niger N402 | polypeptide |
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-18) |
| Note | CAZy:GH26 |
| DBxref | InterPro:IPR017853 |
| DBxref | InterPro:IPR022790 |
| DBxref | InterPro:IPR000805 |
| DBxref | PFAM:PF02156 |
| Product | 4-beta-mannosidase man26A |
| Product | Mannan endo-1 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000004.1 | supercontig | OGUI01000004.1:76710..77717 - |
|
