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ATCC64974_27100-T1, ATCC64974_27100-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_27100-T1
Unique NameATCC64974_27100-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000004.1:171248..172675-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_27100-T1 ID=ATCC64974_27100-T1|Name=ATCC64974_27100-T1|organism=Aspergillus niger N402|type=mRNA|length=1428bp|location=Sequence derived from alignment at OGUI01000004.1:171248..172675- (Aspergillus niger N402)
ATGCCCAGAATCCGACGGATCAAATGCGATGAATCGCCAGGACAATGCAA
CAACTGCGTCTCTGCTAACTGGACGTGCGACGGATACGATGCGTACCGGT
TGCCGCAGCGCCGAGGTCTACAGGATATAGGCACTCGGCTGGGTTGGATG
ATGACGTCGGATGAACACCGTTGTTATTCCTATTTTCAATATCGTTCCGT
TACGAATCTGGCCGGGTTCTTCGACTCCCCACTCTGGCAGCAGTTGGCCC
TACAGATGTCTCGCACTGATCCGGCTGTATTTCATGCGGTGAATATGTTG
AGTGCTGCGCACCAGGAGTCGGAATTGCATAATATGCAGATTTCTGCACG
GTCACGCATTGGGAGCCAGCAGTATTACTTTTCTCTTCAGCAGTCCACGC
GGGCCATCGCGCTCCTGAACCAGCGCCGGAACTCCCAGGATCCCCAGCTG
CGCCAAACCATCCTCCTGTGCTGTCTGCTCTTTGTTCTATTCGATGTGCT
TGTCGCGCAGTATGACAGTGCGTTCACGCATTTACACGGCGGTCTCCGTA
TTCTAAAAGAACTCGAAATCCAAGGGAAGCTGGAGTCGGAGGTTGAGCCA
TCAATAGTTGCCGCATTTCGCCGCCTGGATACACAGGCCTCTCTCTATGA
TACTCGGTTTCCGATCCTAAGCCTGGAGTATGGGAATCAATCCCCGCTTA
AGTTGTTCGAAGCACCAACAGGCGGCTTTACTAGCCTTAGCCAGGTACGA
GAGAAAATCACAGTTCTATTCACAGCGGGTATACCCTTGGTTGCAAGGAG
CTGGAGCCTGAACGGTCCCAACATGGAGACCAACTACGAGTCACTCTACC
AAAGTCAACGGCGATTGCTAGATGCTTTCGCTGAGTTTGACCTACATTTC
ACGTCTTTCCGCGTGACAAAATATCATCAGTTAAGCGAGAAGGAGCAATT
GGGAGCAGATATCACCTACTTGCTTTACCTTGGTCACACTCTCACACTCA
AAACTGTGTTAATTCGTGGACCAGTGCCAGAGTCTCTGGTTCCGGAATTC
ATTGCGCTACTTCAGGCCCATGAAGACATGATCGAGAAGCTCAAGTCCGT
CTCGGGCCTTGTAATGGACCACGTCATGATTGCCCACATGTACCTTGTGG
CCACACAATGCCCAGACGTGGGGATTCGCATACGCGCTATTCGTCTTTTG
CGGTCATGGCCACATTACGAGGGCCTTCACAGCTCCAATGTCACTGCTCT
GATGGCGTTGGGTGCGCTCAAAAGGGACTTTCCCAATGAAGACAAGGCCT
TGTCGATGTTGCAGACGACTGACGCGGAGAATGAATTTCTCGTCGACTCC
TTGGAGTCTATCAAGAATGGCGTGGGAGAACCTACAATTCCGCTTTTCAG
GATGTCTGAGTTGCCGTCACGCCCATGA
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Coding sequence (CDS) from alignment at OGUI01000004.1:171248..172675-

>ATCC64974_27100-T1 ID=ATCC64974_27100-T1|Name=ATCC64974_27100-T1|organism=Aspergillus niger N402|type=CDS|length=1428bp|location=Sequence derived from alignment at OGUI01000004.1:171248..172675- (Aspergillus niger N402)
ATGCCCAGAATCCGACGGATCAAATGCGATGAATCGCCAGGACAATGCAA
CAACTGCGTCTCTGCTAACTGGACGTGCGACGGATACGATGCGTACCGGT
TGCCGCAGCGCCGAGGTCTACAGGATATAGGCACTCGGCTGGGTTGGATG
ATGACGTCGGATGAACACCGTTGTTATTCCTATTTTCAATATCGTTCCGT
TACGAATCTGGCCGGGTTCTTCGACTCCCCACTCTGGCAGCAGTTGGCCC
TACAGATGTCTCGCACTGATCCGGCTGTATTTCATGCGGTGAATATGTTG
AGTGCTGCGCACCAGGAGTCGGAATTGCATAATATGCAGATTTCTGCACG
GTCACGCATTGGGAGCCAGCAGTATTACTTTTCTCTTCAGCAGTCCACGC
GGGCCATCGCGCTCCTGAACCAGCGCCGGAACTCCCAGGATCCCCAGCTG
CGCCAAACCATCCTCCTGTGCTGTCTGCTCTTTGTTCTATTCGATGTGCT
TGTCGCGCAGTATGACAGTGCGTTCACGCATTTACACGGCGGTCTCCGTA
TTCTAAAAGAACTCGAAATCCAAGGGAAGCTGGAGTCGGAGGTTGAGCCA
TCAATAGTTGCCGCATTTCGCCGCCTGGATACACAGGCCTCTCTCTATGA
TACTCGGTTTCCGATCCTAAGCCTGGAGTATGGGAATCAATCCCCGCTTA
AGTTGTTCGAAGCACCAACAGGCGGCTTTACTAGCCTTAGCCAGGTACGA
GAGAAAATCACAGTTCTATTCACAGCGGGTATACCCTTGGTTGCAAGGAG
CTGGAGCCTGAACGGTCCCAACATGGAGACCAACTACGAGTCACTCTACC
AAAGTCAACGGCGATTGCTAGATGCTTTCGCTGAGTTTGACCTACATTTC
ACGTCTTTCCGCGTGACAAAATATCATCAGTTAAGCGAGAAGGAGCAATT
GGGAGCAGATATCACCTACTTGCTTTACCTTGGTCACACTCTCACACTCA
AAACTGTGTTAATTCGTGGACCAGTGCCAGAGTCTCTGGTTCCGGAATTC
ATTGCGCTACTTCAGGCCCATGAAGACATGATCGAGAAGCTCAAGTCCGT
CTCGGGCCTTGTAATGGACCACGTCATGATTGCCCACATGTACCTTGTGG
CCACACAATGCCCAGACGTGGGGATTCGCATACGCGCTATTCGTCTTTTG
CGGTCATGGCCACATTACGAGGGCCTTCACAGCTCCAATGTCACTGCTCT
GATGGCGTTGGGTGCGCTCAAAAGGGACTTTCCCAATGAAGACAAGGCCT
TGTCGATGTTGCAGACGACTGACGCGGAGAATGAATTTCTCGTCGACTCC
TTGGAGTCTATCAAGAATGGCGTGGGAGAACCTACAATTCCGCTTTTCAG
GATGTCTGAGTTGCCGTCACGCCCATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270zinc ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_27100ATCC64974_27100Aspergillus niger N402gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_27100-T1.cdsATCC64974_27100-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_27100-T1.exon1ATCC64974_27100-T1.exon1Aspergillus niger N402exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_27100-T1ATCC64974_27100-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR021858
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000004.1supercontigOGUI01000004.1:171248..172675 -
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