You are here

ATCC64974_27170-T1, ATCC64974_27170-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_27170-T1
Unique NameATCC64974_27170-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000004.1:196515..197040+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_27170-T1 ID=ATCC64974_27170-T1|Name=ATCC64974_27170-T1|organism=Aspergillus niger N402|type=mRNA|length=526bp|location=Sequence derived from alignment at OGUI01000004.1:196515..197040+ (Aspergillus niger N402)
ATGGACCAGCTCAACAGGTAAACACTCCCCTCCCCCTCCCCCTCCCCCAA GCCTCATACACCCTGGAACTCTTTTCCGAAGAGCAACACCCAGATGCAGA GGGGAATTCTGACATCCCGTCCAGCAAGCAAGAAATCAACGACGCCATCG CAAATCACGCGTCCTTCATCCTGATGTTCACGGCCGTGTGGAGTGACGTC GGCAATGCCACCAAGGAAAAGTTTGAGAGGTAAAGCAGCCAGCCTGAATT CCCTACTCTGTGATGTTTCGAACGATGATGCATTTACCTCGTTTCGCCTC TTTCATTGCTTGATACTAACTCAAGAATACTAGCATTGGTGCCAAATACC CTACCGTGTACATGGCCTGGGTTAGCACCGATGACCATCCCGAGCTGGCT GAGGAATGGGGGTACACTGCTATTCCGGCTACCGTTGGTTATAAGAATGG CACCGAGGTGGAACATTACATCGGTCCTCAATTATTGGACCAGCAGGTCG AGGCGTTTATCAAGAAGGTGGTCTAA
back to top

Coding sequence (CDS) from alignment at OGUI01000004.1:196515..197040+

>ATCC64974_27170-T1 ID=ATCC64974_27170-T1|Name=ATCC64974_27170-T1|organism=Aspergillus niger N402|type=CDS|length=945bp|location=Sequence derived from alignment at OGUI01000004.1:196515..197040+ (Aspergillus niger N402)
ATGGACCAGCTCAACAGCAAGCAAGAAATCAACGACGCCATCGCAAATCA
CGCGTCCTTCATCCTGATGTTCACGGCCGTGTGGAGTGACGTCGGCAATG
CCACCAAGGAAAAGTTTGAGAGCATTGGTGCCAAATACCCTACCGTGTAC
ATGGCCTGGGTTAGCACCGATGACCATCCCGAGCTGGCTGAGGAATGGGG
GTACACTGCTATTCCGGCTACCGTTGGTTATAAGAATGGCACCGAGGTGG
AACATTACATCGGTCCTCAATTATTGGACCAGCAGGTCGAGGCGTTTATC
AAGAAGGTGGTCTAAATGGACCAGCTCAACAGCAAGCAAGAAATCAACGA
CGCCATCGCAAATCACGCGTCCTTCATCCTGATGTTCACGGCCGTGTGGA
GTGACGTCGGCAATGCCACCAAGGAAAAGTTTGAGAGCATTGGTGCCAAA
TACCCTACCGTGTACATGGCCTGGGTTAGCACCGATGACCATCCCGAGCT
GGCTGAGGAATGGGGGTACACTGCTATTCCGGCTACCGTTGGTTATAAGA
ATGGCACCGAGGTGGAACATTACATCGGTCCTCAATTATTGGACCAGCAG
GTCGAGGCGTTTATCAAGAAGGTGGTCTAAATGGACCAGCTCAACAGCAA
GCAAGAAATCAACGACGCCATCGCAAATCACGCGTCCTTCATCCTGATGT
TCACGGCCGTGTGGAGTGACGTCGGCAATGCCACCAAGGAAAAGTTTGAG
AGCATTGGTGCCAAATACCCTACCGTGTACATGGCCTGGGTTAGCACCGA
TGACCATCCCGAGCTGGCTGAGGAATGGGGGTACACTGCTATTCCGGCTA
CCGTTGGTTATAAGAATGGCACCGAGGTGGAACATTACATCGGTCCTCAA
TTATTGGACCAGCAGGTCGAGGCGTTTATCAAGAAGGTGGTCTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0045454cell redox homeostasis
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_27170ATCC64974_27170Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_27170-T1.exon1ATCC64974_27170-T1.exon1Aspergillus niger N402exon
ATCC64974_27170-T1.exon2ATCC64974_27170-T1.exon2Aspergillus niger N402exon
ATCC64974_27170-T1.exon3ATCC64974_27170-T1.exon3Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_27170-T1.cdsATCC64974_27170-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_27170-T1ATCC64974_27170-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036249
DBxrefInterPro:IPR013766
DBxrefPFAM:PF00085
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000004.1supercontigOGUI01000004.1:196515..197040 +