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ATCC64974_27180-T1, ATCC64974_27180-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_27180-T1
Unique NameATCC64974_27180-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000004.1:197219..198776-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_27180-T1 ID=ATCC64974_27180-T1|Name=ATCC64974_27180-T1|organism=Aspergillus niger N402|type=mRNA|length=1558bp|location=Sequence derived from alignment at OGUI01000004.1:197219..198776- (Aspergillus niger N402)
ATGCCTGGAGAGTTGATCGTGCAAGGTGAAAGTAGACAGCGACGCAGGAA
GCCTGGGAAGAGATCCAAAACAGGATGTCGAACCTGCCGGTTAGTTTGAT
GAGTCGCTCCATGGATTGTCCATGTCTGATCACGAGTTCAGGGTACGGCG
CGTAAAATGCGACGAGGCACCGGGGTCTTGTAAGAATTGTACTTCTACGG
GCCGAGTGTGCGACGGATACGATATGCACCGATTGCCCATCAAGCGAGCA
TTATGTCTTCCAACCCTAGGACCAAGGTCTGAAGGGATCATGACATCCGA
TGAGAAGCGGGGATTTTCTTACTTTCAACACCGCCTTGTTCCTGACCTTG
TTGGATTCTTTGACTCCTGGCTCTGGCAGAAGCTGGTCTTGCAGATGTGT
CATGCAGATCCAGCGGTATGCCATGCTGTCAACATGGTAAGCGCCATTCA
TCAAGATGCCGAGGAAAGAGGCATGCGGCTGGCAGGAGAGGATCTGCAGA
ATCCAAAACATCGGTTCGCACTTGAGCAGGCCGCCCGATCTTTTTCACAT
TTGCAGAAACGCAGGGCCTCTCCCGATCCACAGTTGCGCGAGGTCGTGCT
GGTGTGCTGCTTGCTTTTTGTTATGGCAGAGCTATTGTTGGGAGAATTTG
CCAGAGCCTTTATACACCTACGTAGTGGCACGCAAATTTTGGAGGAGTCG
CTGCGCCTTGGGATACCCGTGATTCCTTGTCTGTCTGAGACTCTCCGCAT
CTTGAAGTCCCAGTCGTCGCATGTTGGAGACTTCGAGTCAGACCCAGGCC
TTCAAAGCGAAAAGAACAATGATTTTGTTATCGAATCGTCGGAGGACTTT
GATAATCTGAAAGAGGCGCGTCGAGGCTATCAGAGAATTATGTATAGCGT
GATTCCATTCATTGCTACGGTTTGGGGGCTTTCAGAAACAGAGATATTGG
CGAATTACGAAACCCTTTGGATGAAGCGACAGAAGCTTCTATCCTCGCTG
GAATCCCTTGCAGAGCGGTTCGAGTCGTTTTACCAACAAAAGTATTCCAG
TCTTAGCACGAAAGAGCAAACCGGAGCGGATATCGTGCGGCTTCAATTGG
TTGCGAAGACGATCGTACTGAAAACGTGTCTGCTTGACGAGTATGATGAC
AGACTGCTCACACTTGAATACGGTAACCTGTTATCGGAATACGAAGAATT
TATGGACAAATTCCCCTGCCGTCCTACTATTACACTCGACTACGGATTGA
GCTTTGGGCTATTCGCGGTGGCATCGAAGTGCCCAGACATGGGCATCCGG
CTTCGAGCTGTTGATGCCTTGCGCAGGTGGCCGCATTACGAGGGCATGAT
TAATTCCAACGCCGGAGCGGGGATAGCGGTGGAAGCGATCAAGTTGGATC
TACACAAAATGCAGCAGGAAGATGCGGTGCGAGTATCTTCAATGGATCAG
GAACCTGATGTAAGCTTTTGGGAAATGATCAGAAGCACGCAGAATGGGAC
GCAGTGGCCGGCTGTACGCGATGTCGAGCTGCGGACGAAGGAGACTAGAC
GGCTGTGA
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Coding sequence (CDS) from alignment at OGUI01000004.1:197219..198776-

>ATCC64974_27180-T1 ID=ATCC64974_27180-T1|Name=ATCC64974_27180-T1|organism=Aspergillus niger N402|type=CDS|length=3012bp|location=Sequence derived from alignment at OGUI01000004.1:197219..198776- (Aspergillus niger N402)
GGTACGGCGCGTAAAATGCGACGAGGCACCGGGGTCTTGTAAGAATTGTA
CTTCTACGGGCCGAGTGTGCGACGGATACGATATGCACCGATTGCCCATC
AAGCGAGCATTATGTCTTCCAACCCTAGGACCAAGGTCTGAAGGGATCAT
GACATCCGATGAGAAGCGGGGATTTTCTTACTTTCAACACCGCCTTGTTC
CTGACCTTGTTGGATTCTTTGACTCCTGGCTCTGGCAGAAGCTGGTCTTG
CAGATGTGTCATGCAGATCCAGCGGTATGCCATGCTGTCAACATGGTAAG
CGCCATTCATCAAGATGCCGAGGAAAGAGGCATGCGGCTGGCAGGAGAGG
ATCTGCAGAATCCAAAACATCGGTTCGCACTTGAGCAGGCCGCCCGATCT
TTTTCACATTTGCAGAAACGCAGGGCCTCTCCCGATCCACAGTTGCGCGA
GGTCGTGCTGGTGTGCTGCTTGCTTTTTGTTATGGCAGAGCTATTGTTGG
GAGAATTTGCCAGAGCCTTTATACACCTACGTAGTGGCACGCAAATTTTG
GAGGAGTCGCTGCGCCTTGGGATACCCGTGATTCCTTGTCTGTCTGAGAC
TCTCCGCATCTTGAAGTCCCAGTCGTCGCATGTTGGAGACTTCGAGTCAG
ACCCAGGCCTTCAAAGCGAAAAGAACAATGATTTTGTTATCGAATCGTCG
GAGGACTTTGATAATCTGAAAGAGGCGCGTCGAGGCTATCAGAGAATTAT
GTATAGCGTGATTCCATTCATTGCTACGGTTTGGGGGCTTTCAGAAACAG
AGATATTGGCGAATTACGAAACCCTTTGGATGAAGCGACAGAAGCTTCTA
TCCTCGCTGGAATCCCTTGCAGAGCGGTTCGAGTCGTTTTACCAACAAAA
GTATTCCAGTCTTAGCACGAAAGAGCAAACCGGAGCGGATATCGTGCGGC
TTCAATTGGTTGCGAAGACGATCGTACTGAAAACGTGTCTGCTTGACGAG
TATGATGACAGACTGCTCACACTTGAATACGGTAACCTGTTATCGGAATA
CGAAGAATTTATGGACAAATTCCCCTGCCGTCCTACTATTACACTCGACT
ACGGATTGAGCTTTGGGCTATTCGCGGTGGCATCGAAGTGCCCAGACATG
GGCATCCGGCTTCGAGCTGTTGATGCCTTGCGCAGGTGGCCGCATTACGA
GGGCATGATTAATTCCAACGCCGGAGCGGGGATAGCGGTGGAAGCGATCA
AGTTGGATCTACACAAAATGCAGCAGGAAGATGCGGTGCGAGTATCTTCA
ATGGATCAGGAACCTGATGTAAGCTTTTGGGAAATGATCAGAAGCACGCA
GAATGGGACGCAGTGGCCGGCTGTACGCGATGTCGAGCTGCGGACGAAGG
AGACTAGACGGCTGTGAATGCCTGGAGAGTTGATCGTGCAAGGTGAAAGT
AGACAGCGACGCAGGAAGCCTGGGAAGAGATCCAAAACAGGATGTCGAAC
CTGCCGGGTACGGCGCGTAAAATGCGACGAGGCACCGGGGTCTTGTAAGA
ATTGTACTTCTACGGGCCGAGTGTGCGACGGATACGATATGCACCGATTG
CCCATCAAGCGAGCATTATGTCTTCCAACCCTAGGACCAAGGTCTGAAGG
GATCATGACATCCGATGAGAAGCGGGGATTTTCTTACTTTCAACACCGCC
TTGTTCCTGACCTTGTTGGATTCTTTGACTCCTGGCTCTGGCAGAAGCTG
GTCTTGCAGATGTGTCATGCAGATCCAGCGGTATGCCATGCTGTCAACAT
GGTAAGCGCCATTCATCAAGATGCCGAGGAAAGAGGCATGCGGCTGGCAG
GAGAGGATCTGCAGAATCCAAAACATCGGTTCGCACTTGAGCAGGCCGCC
CGATCTTTTTCACATTTGCAGAAACGCAGGGCCTCTCCCGATCCACAGTT
GCGCGAGGTCGTGCTGGTGTGCTGCTTGCTTTTTGTTATGGCAGAGCTAT
TGTTGGGAGAATTTGCCAGAGCCTTTATACACCTACGTAGTGGCACGCAA
ATTTTGGAGGAGTCGCTGCGCCTTGGGATACCCGTGATTCCTTGTCTGTC
TGAGACTCTCCGCATCTTGAAGTCCCAGTCGTCGCATGTTGGAGACTTCG
AGTCAGACCCAGGCCTTCAAAGCGAAAAGAACAATGATTTTGTTATCGAA
TCGTCGGAGGACTTTGATAATCTGAAAGAGGCGCGTCGAGGCTATCAGAG
AATTATGTATAGCGTGATTCCATTCATTGCTACGGTTTGGGGGCTTTCAG
AAACAGAGATATTGGCGAATTACGAAACCCTTTGGATGAAGCGACAGAAG
CTTCTATCCTCGCTGGAATCCCTTGCAGAGCGGTTCGAGTCGTTTTACCA
ACAAAAGTATTCCAGTCTTAGCACGAAAGAGCAAACCGGAGCGGATATCG
TGCGGCTTCAATTGGTTGCGAAGACGATCGTACTGAAAACGTGTCTGCTT
GACGAGTATGATGACAGACTGCTCACACTTGAATACGGTAACCTGTTATC
GGAATACGAAGAATTTATGGACAAATTCCCCTGCCGTCCTACTATTACAC
TCGACTACGGATTGAGCTTTGGGCTATTCGCGGTGGCATCGAAGTGCCCA
GACATGGGCATCCGGCTTCGAGCTGTTGATGCCTTGCGCAGGTGGCCGCA
TTACGAGGGCATGATTAATTCCAACGCCGGAGCGGGGATAGCGGTGGAAG
CGATCAAGTTGGATCTACACAAAATGCAGCAGGAAGATGCGGTGCGAGTA
TCTTCAATGGATCAGGAACCTGATGTAAGCTTTTGGGAAATGATCAGAAG
CACGCAGAATGGGACGCAGTGGCCGGCTGTACGCGATGTCGAGCTGCGGA
CGAAGGAGACTAGACGGCTGTGAATGCCTGGAGAGTTGATCGTGCAAGGT
GAAAGTAGACAGCGACGCAGGAAGCCTGGGAAGAGATCCAAAACAGGATG
TCGAACCTGCCG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270zinc ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_27180ATCC64974_27180Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_27180-T1ATCC64974_27180-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_27180-T1.cdsATCC64974_27180-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_27180-T1.exon2ATCC64974_27180-T1.exon2Aspergillus niger N402exon
ATCC64974_27180-T1.exon1ATCC64974_27180-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR021858
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000004.1supercontigOGUI01000004.1:197219..198776 -
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