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ATCC64974_27200-T1, ATCC64974_27200-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_27200-T1
Unique NameATCC64974_27200-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000004.1:201822..202886-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_27200-T1 ID=ATCC64974_27200-T1|Name=ATCC64974_27200-T1|organism=Aspergillus niger N402|type=mRNA|length=1065bp|location=Sequence derived from alignment at OGUI01000004.1:201822..202886- (Aspergillus niger N402)
ATGCCATCGTTTGATCCCACAAATGTAAACTTAGACACTGCCAGTGTGGA
GGACATATACTGTTACCTGCAGTTGTCTGGAAATGATTACAATGGACACC
TGGGTGCACGCATCTCTGCGATATTTGTGATCCTGATAACATCATCAGCA
TGTACGCTTTTTCCAGTGGTAGCCAAGCGAATACCACGCTGGAATATCCC
ATACCCTGTCTATCTCTTCGCTCGATACTTCGGTACGGGTGTTATTGTCG
CAACCGCATTCATCCACCTATTGGACCCAGCGTATGGAAGCATCGGCAGC
ACAACCTGCGTGGGCGTATCGGAGCATTGGGCAGATTATTCCTGGTGTCC
TGCCATTGTTCTCGTGTCTGTGCTCATGGTGTTCCTGATAGACGTGGCTT
CCGAAGTATACGTCGAGCGCGTATATGGGGTGGAAAGAGAGTACGACGCG
ACCGACCGGTTTCTGGCCCAAGCAAACTTAATCCAGAGCGACGACGAGAG
TACAGTCAATGATGATGCTGGTGGAATTAAGCAGCCTGGGATTCAAGATG
ACATTTGCTCAGTCGAATCCGAGCGCTCATTTCGCAAAGATATCGCTGCC
TTTCTTATTCTGGAGTTCGGCATTATCTTCCATTCGGTAATCATCGGGCT
TAACCTGGGAGTGACTGGCGACGAGTTCACCACTCTGTACCCCGTGTTGG
TCTTCCATCAAGCGTTTGAAGGCCTTGGAATCGGCGCCCGAATGTCTGCG
CTTCGCTTTGGCCGACATTGGTGGCTGCCGTGGGTTCTCTGCATGGCATA
CGGCCTCACTACGCCAATTTCGATTGCTATCGGCATAGGGGTACGCACAA
CGTATAACTCGGGATCCAGGACAGCAAACATTGTCCAGGGCGTATTGGAT
GCTGTCTCAGCCGGCATTTTGATCTACAGTGGATTAGTGGAATTGCTGGC
TCGCGACTTTCTGTTCGACCCAGACCGGGCTAAGCGGCGGTCGCATCTGC
TGGGAATGATCTTCTGCGTATTGCTGGGAGCCGGCATCATGGCACTTATT
GGGAAGTGGGCATGA
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Coding sequence (CDS) from alignment at OGUI01000004.1:201822..202886-

>ATCC64974_27200-T1 ID=ATCC64974_27200-T1|Name=ATCC64974_27200-T1|organism=Aspergillus niger N402|type=CDS|length=1065bp|location=Sequence derived from alignment at OGUI01000004.1:201822..202886- (Aspergillus niger N402)
ATGCCATCGTTTGATCCCACAAATGTAAACTTAGACACTGCCAGTGTGGA
GGACATATACTGTTACCTGCAGTTGTCTGGAAATGATTACAATGGACACC
TGGGTGCACGCATCTCTGCGATATTTGTGATCCTGATAACATCATCAGCA
TGTACGCTTTTTCCAGTGGTAGCCAAGCGAATACCACGCTGGAATATCCC
ATACCCTGTCTATCTCTTCGCTCGATACTTCGGTACGGGTGTTATTGTCG
CAACCGCATTCATCCACCTATTGGACCCAGCGTATGGAAGCATCGGCAGC
ACAACCTGCGTGGGCGTATCGGAGCATTGGGCAGATTATTCCTGGTGTCC
TGCCATTGTTCTCGTGTCTGTGCTCATGGTGTTCCTGATAGACGTGGCTT
CCGAAGTATACGTCGAGCGCGTATATGGGGTGGAAAGAGAGTACGACGCG
ACCGACCGGTTTCTGGCCCAAGCAAACTTAATCCAGAGCGACGACGAGAG
TACAGTCAATGATGATGCTGGTGGAATTAAGCAGCCTGGGATTCAAGATG
ACATTTGCTCAGTCGAATCCGAGCGCTCATTTCGCAAAGATATCGCTGCC
TTTCTTATTCTGGAGTTCGGCATTATCTTCCATTCGGTAATCATCGGGCT
TAACCTGGGAGTGACTGGCGACGAGTTCACCACTCTGTACCCCGTGTTGG
TCTTCCATCAAGCGTTTGAAGGCCTTGGAATCGGCGCCCGAATGTCTGCG
CTTCGCTTTGGCCGACATTGGTGGCTGCCGTGGGTTCTCTGCATGGCATA
CGGCCTCACTACGCCAATTTCGATTGCTATCGGCATAGGGGTACGCACAA
CGTATAACTCGGGATCCAGGACAGCAAACATTGTCCAGGGCGTATTGGAT
GCTGTCTCAGCCGGCATTTTGATCTACAGTGGATTAGTGGAATTGCTGGC
TCGCGACTTTCTGTTCGACCCAGACCGGGCTAAGCGGCGGTCGCATCTGC
TGGGAATGATCTTCTGCGTATTGCTGGGAGCCGGCATCATGGCACTTATT
GGGAAGTGGGCATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0071577zinc ion transmembrane transport
GO:0030001metal ion transport
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0005385zinc ion transmembrane transporter activity
GO:0046873metal ion transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_27200ATCC64974_27200Aspergillus niger N402gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_27200-T1.cdsATCC64974_27200-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_27200-T1.exon1ATCC64974_27200-T1.exon1Aspergillus niger N402exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_27200-T1ATCC64974_27200-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR004698
DBxrefInterPro:IPR003689
DBxrefPFAM:PF02535
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000004.1supercontigOGUI01000004.1:201822..202886 -
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