You are here

Home

ATCC64974_27380-T1, ATCC64974_27380-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_27380-T1
Unique NameATCC64974_27380-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000004.1:250949..251469+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_27380-T1 ID=ATCC64974_27380-T1|Name=ATCC64974_27380-T1|organism=Aspergillus niger N402|type=mRNA|length=521bp|location=Sequence derived from alignment at OGUI01000004.1:250949..251469+ (Aspergillus niger N402)
ATGTTCCAACTCAAGGTACACCCATCCCATACCAACCTCATCACACTCAC
ACACACACACACACACACACACCCATTCTTCACAAATCACCAACAACAAA
CCAACCAAAACATCTAATCTAGACTATCCTCCTCTCCCTCCCCCTCCTCC
TCACAACCACGCTCGCCGCCCCCTCCACTTCGCTCGATACCCGCTCCGAC
TCCAAATGCGTCTACTACTGCGGCAGCCACTGCTACTGGGCCAGCGACAT
CAGCAAAGCGCAAGCAAAGGGATACTCGCTACACGAAGAAGGGCGCACGA
TCGACGACTACCCGCACGTCTACCACGACTACGAAGGATTCGACTTCACC
GTCTCGGGCACATACTACGAGTACCCGATTCTGGATGATTACAAGGTGTA
TGATGGAGGGTCTCCCGGTGCGGATCGGATCATTTTCAATGGGGAGGATG
AGTTTGCGGGGTTGATTACGCATACGGGCGCGGAGGAATATGATGGGTTT
GTGGCTTGTGAGGCTGTTTAG
back to top

Coding sequence (CDS) from alignment at OGUI01000004.1:250949..251469+

>ATCC64974_27380-T1 ID=ATCC64974_27380-T1|Name=ATCC64974_27380-T1|organism=Aspergillus niger N402|type=CDS|length=828bp|location=Sequence derived from alignment at OGUI01000004.1:250949..251469+ (Aspergillus niger N402)
ATGTTCCAACTCAAGACTATCCTCCTCTCCCTCCCCCTCCTCCTCACAAC
CACGCTCGCCGCCCCCTCCACTTCGCTCGATACCCGCTCCGACTCCAAAT
GCGTCTACTACTGCGGCAGCCACTGCTACTGGGCCAGCGACATCAGCAAA
GCGCAAGCAAAGGGATACTCGCTACACGAAGAAGGGCGCACGATCGACGA
CTACCCGCACGTCTACCACGACTACGAAGGATTCGACTTCACCGTCTCGG
GCACATACTACGAGTACCCGATTCTGGATGATTACAAGGTGTATGATGGA
GGGTCTCCCGGTGCGGATCGGATCATTTTCAATGGGGAGGATGAGTTTGC
GGGGTTGATTACGCATACGGGCGCGGAGGAATATGATGGGTTTGTGGCTT
GTGAGGCTGTTTAGATGTTCCAACTCAAGACTATCCTCCTCTCCCTCCCC
CTCCTCCTCACAACCACGCTCGCCGCCCCCTCCACTTCGCTCGATACCCG
CTCCGACTCCAAATGCGTCTACTACTGCGGCAGCCACTGCTACTGGGCCA
GCGACATCAGCAAAGCGCAAGCAAAGGGATACTCGCTACACGAAGAAGGG
CGCACGATCGACGACTACCCGCACGTCTACCACGACTACGAAGGATTCGA
CTTCACCGTCTCGGGCACATACTACGAGTACCCGATTCTGGATGATTACA
AGGTGTATGATGGAGGGTCTCCCGGTGCGGATCGGATCATTTTCAATGGG
GAGGATGAGTTTGCGGGGTTGATTACGCATACGGGCGCGGAGGAATATGA
TGGGTTTGTGGCTTGTGAGGCTGTTTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004540ribonuclease activity
GO:0003723RNA binding
GO:0004521endoribonuclease activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_27380ATCC64974_27380Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_27380-T1.exon1ATCC64974_27380-T1.exon1Aspergillus niger N402exon
ATCC64974_27380-T1.exon2ATCC64974_27380-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_27380-T1.cdsATCC64974_27380-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_27380-T1ATCC64974_27380-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-20)
DBxrefInterPro:IPR016191
DBxrefInterPro:IPR000026
DBxrefPFAM:PF00545
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000004.1supercontigOGUI01000004.1:250949..251469 +
Powered by Drupal