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ATCC64974_27580-T1, ATCC64974_27580-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_27580-T1
Unique NameATCC64974_27580-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000004.1:316488..317725+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_27580-T1 ID=ATCC64974_27580-T1|Name=ATCC64974_27580-T1|organism=Aspergillus niger N402|type=mRNA|length=1238bp|location=Sequence derived from alignment at OGUI01000004.1:316488..317725+ (Aspergillus niger N402)
ATGGGAACACAAGCATCACAAGGGCATTCGGGCGATGCTGCTGCTATGCT
GCGGAGGCGGAAGTCATACAGAGTATGTAGTAGTACTCAGTAGATCACAG
CACATAAACGCTATTCCTGATGTGGAATGGCACAAGGCAAGCTTATCCAC
CGCACTAACGTGGCTGAGTCAGCAGTACCGGCAAAAATGCAGGGCAAGCG
TAATGAGCCCTAACGCACCGAGAGCAGTTAGACTCGCTAAGCGAGCCACT
AGCTCGACTCTCTCGGGCGGCCAAACCTGAGCGCGAATTTTCGAGATCGA
TTTCGACCCGTACGACAACTCCCAGCGCCAGCCCGCGAGACGACGACAAG
GTATGTGATATTGCTGTCAGCTGCTTGCCTGTTGCATGCTAATTGAGAAC
AGATGGTCCTCGCAAAGAAGCACGTCCCCATCGTCAAGAAGCGTATGTCC
TTTCTTTTCTCCCTGCTAGTCCCAGCCCAGTCCAGTTCCCAGCCAGAGTA
CGATCCGTCGGTTGTCAGTCGTCCAGCAAGCATGAGGAATATACACGGTG
CGATGGAATGAGAAATCAGACGATCGGAGCGAACGAATCAATTGGTGCGA
AAAAAAAAAATAACGACAACGAACGACGAATATGATCGGCGAAGAAATTA
TCATAAGCGACCGAAATTTCGATTCGATCTGGACGAAGATATTTTACCAC
CAACATGAATTGACAAGTGCTTGCTGGACCACGGACATACAGCCGGATTG
AACTAAACCACATACACACATCATCAAGACGAACGACCCGACTAACATCA
AACTCCTTCCAGGCACCAAGCGTTTCTGGCGCCACCAGTCCGACCGCTTC
AAGTGCGTGCCGGAGTCATGGCGCAAGCCCAAGGGTATCGACAACCGCGT
CCGTAGACGCTTCCGTGGCAACATCCCCATGCCCTCCATCGGCTACGGAT
CCAACAAGAAGACCAAGCACATGATGCCCTCCGGCCACAAGGCTTTCCTC
GTCCACAACCCCAAGGACGTTGAGCTCCTGTTGATGCACAACCGCACCTA
CGCCGCTGAGTACGTTTCACCTGTCTTTCTGACATGACCTCTATAACCAC
GGAATATACGATGCTAATAAAGAAAACAGGATCGCCAGCGCCGTCTCCTC
CCGCAAGCGCGTCGACATCATCGCCAAGGCCAAGGCTCTCGGCGTCAAGG
TCACCAACCCCAAGGGCCGCGTCACCACCGAGGCTTAA
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Coding sequence (CDS) from alignment at OGUI01000004.1:316488..317725+

>ATCC64974_27580-T1 ID=ATCC64974_27580-T1|Name=ATCC64974_27580-T1|organism=Aspergillus niger N402|type=CDS|length=2955bp|location=Sequence derived from alignment at OGUI01000004.1:316488..317725+ (Aspergillus niger N402)
ATGGGAACACAAGCATCACAAGGGCATTCGGGCGATGCTGCTGCTATGCT
GCGGAGGCGGAAGTCATACAGATTAGACTCGCTAAGCGAGCCACTAGCTC
GACTCTCTCGGGCGGCCAAACCTGAGCGCGAATTTTCGAGATCGATTTCG
ACCCGTACGACAACTCCCAGCGCCAGCCCGCGAGACGACGACAAGATGGT
CCTCGCAAAGAAGCACGTCCCCATCGTCAAGAAGCGCACCAAGCGTTTCT
GGCGCCACCAGTCCGACCGCTTCAAGTGCGTGCCGGAGTCATGGCGCAAG
CCCAAGGGTATCGACAACCGCGTCCGTAGACGCTTCCGTGGCAACATCCC
CATGCCCTCCATCGGCTACGGATCCAACAAGAAGACCAAGCACATGATGC
CCTCCGGCCACAAGGCTTTCCTCGTCCACAACCCCAAGGACGTTGAGCTC
CTGTTGATGCACAACCGCACCTACGCCGCTGAGATCGCCAGCGCCGTCTC
CTCCCGCAAGCGCGTCGACATCATCGCCAAGGCCAAGGCTCTCGGCGTCA
AGGTCACCAACCCCAAGGGCCGCGTCACCACCGAGGCTTAAATGGGAACA
CAAGCATCACAAGGGCATTCGGGCGATGCTGCTGCTATGCTGCGGAGGCG
GAAGTCATACAGATTAGACTCGCTAAGCGAGCCACTAGCTCGACTCTCTC
GGGCGGCCAAACCTGAGCGCGAATTTTCGAGATCGATTTCGACCCGTACG
ACAACTCCCAGCGCCAGCCCGCGAGACGACGACAAGATGGTCCTCGCAAA
GAAGCACGTCCCCATCGTCAAGAAGCGCACCAAGCGTTTCTGGCGCCACC
AGTCCGACCGCTTCAAGTGCGTGCCGGAGTCATGGCGCAAGCCCAAGGGT
ATCGACAACCGCGTCCGTAGACGCTTCCGTGGCAACATCCCCATGCCCTC
CATCGGCTACGGATCCAACAAGAAGACCAAGCACATGATGCCCTCCGGCC
ACAAGGCTTTCCTCGTCCACAACCCCAAGGACGTTGAGCTCCTGTTGATG
CACAACCGCACCTACGCCGCTGAGATCGCCAGCGCCGTCTCCTCCCGCAA
GCGCGTCGACATCATCGCCAAGGCCAAGGCTCTCGGCGTCAAGGTCACCA
ACCCCAAGGGCCGCGTCACCACCGAGGCTTAAATGGGAACACAAGCATCA
CAAGGGCATTCGGGCGATGCTGCTGCTATGCTGCGGAGGCGGAAGTCATA
CAGATTAGACTCGCTAAGCGAGCCACTAGCTCGACTCTCTCGGGCGGCCA
AACCTGAGCGCGAATTTTCGAGATCGATTTCGACCCGTACGACAACTCCC
AGCGCCAGCCCGCGAGACGACGACAAGATGGTCCTCGCAAAGAAGCACGT
CCCCATCGTCAAGAAGCGCACCAAGCGTTTCTGGCGCCACCAGTCCGACC
GCTTCAAGTGCGTGCCGGAGTCATGGCGCAAGCCCAAGGGTATCGACAAC
CGCGTCCGTAGACGCTTCCGTGGCAACATCCCCATGCCCTCCATCGGCTA
CGGATCCAACAAGAAGACCAAGCACATGATGCCCTCCGGCCACAAGGCTT
TCCTCGTCCACAACCCCAAGGACGTTGAGCTCCTGTTGATGCACAACCGC
ACCTACGCCGCTGAGATCGCCAGCGCCGTCTCCTCCCGCAAGCGCGTCGA
CATCATCGCCAAGGCCAAGGCTCTCGGCGTCAAGGTCACCAACCCCAAGG
GCCGCGTCACCACCGAGGCTTAAATGGGAACACAAGCATCACAAGGGCAT
TCGGGCGATGCTGCTGCTATGCTGCGGAGGCGGAAGTCATACAGATTAGA
CTCGCTAAGCGAGCCACTAGCTCGACTCTCTCGGGCGGCCAAACCTGAGC
GCGAATTTTCGAGATCGATTTCGACCCGTACGACAACTCCCAGCGCCAGC
CCGCGAGACGACGACAAGATGGTCCTCGCAAAGAAGCACGTCCCCATCGT
CAAGAAGCGCACCAAGCGTTTCTGGCGCCACCAGTCCGACCGCTTCAAGT
GCGTGCCGGAGTCATGGCGCAAGCCCAAGGGTATCGACAACCGCGTCCGT
AGACGCTTCCGTGGCAACATCCCCATGCCCTCCATCGGCTACGGATCCAA
CAAGAAGACCAAGCACATGATGCCCTCCGGCCACAAGGCTTTCCTCGTCC
ACAACCCCAAGGACGTTGAGCTCCTGTTGATGCACAACCGCACCTACGCC
GCTGAGATCGCCAGCGCCGTCTCCTCCCGCAAGCGCGTCGACATCATCGC
CAAGGCCAAGGCTCTCGGCGTCAAGGTCACCAACCCCAAGGGCCGCGTCA
CCACCGAGGCTTAAATGGGAACACAAGCATCACAAGGGCATTCGGGCGAT
GCTGCTGCTATGCTGCGGAGGCGGAAGTCATACAGATTAGACTCGCTAAG
CGAGCCACTAGCTCGACTCTCTCGGGCGGCCAAACCTGAGCGCGAATTTT
CGAGATCGATTTCGACCCGTACGACAACTCCCAGCGCCAGCCCGCGAGAC
GACGACAAGATGGTCCTCGCAAAGAAGCACGTCCCCATCGTCAAGAAGCG
CACCAAGCGTTTCTGGCGCCACCAGTCCGACCGCTTCAAGTGCGTGCCGG
AGTCATGGCGCAAGCCCAAGGGTATCGACAACCGCGTCCGTAGACGCTTC
CGTGGCAACATCCCCATGCCCTCCATCGGCTACGGATCCAACAAGAAGAC
CAAGCACATGATGCCCTCCGGCCACAAGGCTTTCCTCGTCCACAACCCCA
AGGACGTTGAGCTCCTGTTGATGCACAACCGCACCTACGCCGCTGAGATC
GCCAGCGCCGTCTCCTCCCGCAAGCGCGTCGACATCATCGCCAAGGCCAA
GGCTCTCGGCGTCAAGGTCACCAACCCCAAGGGCCGCGTCACCACCGAGG
CTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CRP63ATCC64974_27580Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_27580-T1ATCC64974_27580-T1-proteinAspergillus niger N402polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_27580-T1.exon1ATCC64974_27580-T1.exon1Aspergillus niger N402exon
ATCC64974_27580-T1.exon2ATCC64974_27580-T1.exon2Aspergillus niger N402exon
ATCC64974_27580-T1.exon3ATCC64974_27580-T1.exon3Aspergillus niger N402exon
ATCC64974_27580-T1.exon4ATCC64974_27580-T1.exon4Aspergillus niger N402exon
ATCC64974_27580-T1.exon5ATCC64974_27580-T1.exon5Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_27580-T1.cdsATCC64974_27580-T1.cdsAspergillus niger N402CDS


Properties
Property NameValue
DBxrefInterPro:IPR036351
DBxrefInterPro:IPR001515
DBxrefPFAM:PF01655
Product60S ribosomal protein L32
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000004.1supercontigOGUI01000004.1:316488..317725 +
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