You are here

Home

ATCC64974_27630-T1, ATCC64974_27630-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_27630-T1
Unique NameATCC64974_27630-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000004.1:331788..333405-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_27630-T1 ID=ATCC64974_27630-T1|Name=ATCC64974_27630-T1|organism=Aspergillus niger N402|type=mRNA|length=1618bp|location=Sequence derived from alignment at OGUI01000004.1:331788..333405- (Aspergillus niger N402)
ATGTGTTCCCGCTATCGCTTAAAATTTAGATGTTACTAGCTTGAGCCTCC
GGTATGCTGACTGATTTGGTATGATTTAGTGTCGAAAGCGGACGTTGACC
TCTACGGTATATATATTGTCTACTCTTAATTTCTGCAGAGAGAAAATGCG
GAAAGCCAACATTACAACAGCGACTAATCAGAATATGATGGATTACAGAG
GTCTTGGGCATTGACAAGAGTGCCGGCAAAGATGATATCCGGAAGGCATA
TCGCAAGGTATTCAGATTCTCTATATCGAACACAGTATTGAAGTACAGTC
TAATACTTTTTGGGTCCAAAGGCCGCTCTAGCAAATCACCCCGACAAAGT
CCCCGAAGCCGAAAGACAAGATGCAGAGGTCCGATTCAAGGCCGTGCAGG
AAGCCTACGACATCCTCTACGACGAAGAGAAGCGTGAGATCTACGATACC
CATGGAATGGGCGCTTTCAACGGCTCCGGTGAACCGGGTATGGGCGCGGG
CCCTGATTTGGATGATATTCTTGCGCAGATGTTCGGTGGTATGGGAGGTA
TGGGCGGCATGGGCGGAATGCCCGGTGGTCCGCATGCGCGTAAGCCGCGC
AAGAGCCCGGATGAGGAGCAGAAGTATGAGGTTCGCCTGGAGGATCTGTA
CAAGGGCAAGACGGTCAAGTTTGCCAGCACGAAGAATGTGATTTGCTCTC
TGTGTCAAGGCAAGGGTGGTAAGGAGAGGGCGACGGCCAGGAAGTGCTCC
ACTTGCGATGGTGAAGGTAGGTTCATATACCTATGGGACTTGGTGTGCAG
AATTCCGGGCTAATGTATTGCTTCGCAGGTTACAAGCAGATTTTGCGCCC
GATGGGTCAGTTCCTGTCTCCGGCTATGGTTCCCTGCCCTACCTGTAACG
GAGCGGGTGACTACTTTGTCGACAAGGATAAGTGCAAGAAGTGCAAGGGC
AAGAAGACCACCGAGGCTAAGAAGTTGCTGGAGATCTACATCCCTCGCGG
GGCGAGGTGAGTCTAGCTATGTGTCGTACTGCCTCGAGTGCAGTAACTAA
CACTGTGATTAGGGAAGGAGACAAGATCATCCTCGAGGGCGAGGCCGACC
AGGTGCCGGGTCAGGAACCTGGAGATATCGTTTTCCACATCGTGGAAGAG
GAGCACGAGACTTTCCGAAGGGCTGCTGCCGATCTGACGGCAACAATCGA
TGTTACGCTGGCCGAGGCTCTGACGGGCTTCTCCCGGGTGGTAGTCAAGC
ACCTTGACGGTCGCGGAATCGAAATTCAGCACCCCAAGACCCCAGGTGAG
GTTCTGTATCCGGGCCAGGTCCTGAAGGTGCCTGGTGAGGGTATGCCCAT
CAAGCGCAGCGATGCCCGTGGTGACCTGTACCTGGTCGTCAACATCAAGT
TCCCCGACGGGAAATGGAAGCCCAGCCCTGCTGTTCTGGAGCAACTCAAG
GAACTGTTGCCCAAGCCGGAACCCCCTATTCAGGCTGACACCGTGGACGA
GGTAGAGTTCGACCCCAAGGGCAATCTGGATGACTTTGGGGCGCATGACC
CCGAGGGGGGTTCTGCATGGGAGGATGATGATGAGGGTGAGACGACTGCG
CAGTGTGCGACCCAGTAG
back to top

Coding sequence (CDS) from alignment at OGUI01000004.1:331788..333405-

>ATCC64974_27630-T1 ID=ATCC64974_27630-T1|Name=ATCC64974_27630-T1|organism=Aspergillus niger N402|type=CDS|length=7776bp|location=Sequence derived from alignment at OGUI01000004.1:331788..333405- (Aspergillus niger N402)
GGAAGGAGACAAGATCATCCTCGAGGGCGAGGCCGACCAGGTGCCGGGTC
AGGAACCTGGAGATATCGTTTTCCACATCGTGGAAGAGGAGCACGAGACT
TTCCGAAGGGCTGCTGCCGATCTGACGGCAACAATCGATGTTACGCTGGC
CGAGGCTCTGACGGGCTTCTCCCGGGTGGTAGTCAAGCACCTTGACGGTC
GCGGAATCGAAATTCAGCACCCCAAGACCCCAGGTGAGGTTCTGTATCCG
GGCCAGGTCCTGAAGGTGCCTGGTGAGGGTATGCCCATCAAGCGCAGCGA
TGCCCGTGGTGACCTGTACCTGGTCGTCAACATCAAGTTCCCCGACGGGA
AATGGAAGCCCAGCCCTGCTGTTCTGGAGCAACTCAAGGAACTGTTGCCC
AAGCCGGAACCCCCTATTCAGGCTGACACCGTGGACGAGGTAGAGTTCGA
CCCCAAGGGCAATCTGGATGACTTTGGGGCGCATGACCCCGAGGGGGGTT
CTGCATGGGAGGATGATGATGAGGGTGAGACGACTGCGCAGTGTGCGACC
CAGTAGGTTACAAGCAGATTTTGCGCCCGATGGGTCAGTTCCTGTCTCCG
GCTATGGTTCCCTGCCCTACCTGTAACGGAGCGGGTGACTACTTTGTCGA
CAAGGATAAGTGCAAGAAGTGCAAGGGCAAGAAGACCACCGAGGCTAAGA
AGTTGCTGGAGATCTACATCCCTCGCGGGGCGAGGCCGCTCTAGCAAATC
ACCCCGACAAAGTCCCCGAAGCCGAAAGACAAGATGCAGAGGTCCGATTC
AAGGCCGTGCAGGAAGCCTACGACATCCTCTACGACGAAGAGAAGCGTGA
GATCTACGATACCCATGGAATGGGCGCTTTCAACGGCTCCGGTGAACCGG
GTATGGGCGCGGGCCCTGATTTGGATGATATTCTTGCGCAGATGTTCGGT
GGTATGGGAGGTATGGGCGGCATGGGCGGAATGCCCGGTGGTCCGCATGC
GCGTAAGCCGCGCAAGAGCCCGGATGAGGAGCAGAAGTATGAGGTTCGCC
TGGAGGATCTGTACAAGGGCAAGACGGTCAAGTTTGCCAGCACGAAGAAT
GTGATTTGCTCTCTGTGTCAAGGCAAGGGTGGTAAGGAGAGGGCGACGGC
CAGGAAGTGCTCCACTTGCGATGGTGAAGAGGTCTTGGGCATTGACAAGA
GTGCCGGCAAAGATGATATCCGGAAGGCATATCGCAAGTGTCGAAAGCGG
ACGTTGACCTCTACGATGTGTTCCCGCTATCGCTTAAAATTTAGATGGAA
GGAGACAAGATCATCCTCGAGGGCGAGGCCGACCAGGTGCCGGGTCAGGA
ACCTGGAGATATCGTTTTCCACATCGTGGAAGAGGAGCACGAGACTTTCC
GAAGGGCTGCTGCCGATCTGACGGCAACAATCGATGTTACGCTGGCCGAG
GCTCTGACGGGCTTCTCCCGGGTGGTAGTCAAGCACCTTGACGGTCGCGG
AATCGAAATTCAGCACCCCAAGACCCCAGGTGAGGTTCTGTATCCGGGCC
AGGTCCTGAAGGTGCCTGGTGAGGGTATGCCCATCAAGCGCAGCGATGCC
CGTGGTGACCTGTACCTGGTCGTCAACATCAAGTTCCCCGACGGGAAATG
GAAGCCCAGCCCTGCTGTTCTGGAGCAACTCAAGGAACTGTTGCCCAAGC
CGGAACCCCCTATTCAGGCTGACACCGTGGACGAGGTAGAGTTCGACCCC
AAGGGCAATCTGGATGACTTTGGGGCGCATGACCCCGAGGGGGGTTCTGC
ATGGGAGGATGATGATGAGGGTGAGACGACTGCGCAGTGTGCGACCCAGT
AGGTTACAAGCAGATTTTGCGCCCGATGGGTCAGTTCCTGTCTCCGGCTA
TGGTTCCCTGCCCTACCTGTAACGGAGCGGGTGACTACTTTGTCGACAAG
GATAAGTGCAAGAAGTGCAAGGGCAAGAAGACCACCGAGGCTAAGAAGTT
GCTGGAGATCTACATCCCTCGCGGGGCGAGGCCGCTCTAGCAAATCACCC
CGACAAAGTCCCCGAAGCCGAAAGACAAGATGCAGAGGTCCGATTCAAGG
CCGTGCAGGAAGCCTACGACATCCTCTACGACGAAGAGAAGCGTGAGATC
TACGATACCCATGGAATGGGCGCTTTCAACGGCTCCGGTGAACCGGGTAT
GGGCGCGGGCCCTGATTTGGATGATATTCTTGCGCAGATGTTCGGTGGTA
TGGGAGGTATGGGCGGCATGGGCGGAATGCCCGGTGGTCCGCATGCGCGT
AAGCCGCGCAAGAGCCCGGATGAGGAGCAGAAGTATGAGGTTCGCCTGGA
GGATCTGTACAAGGGCAAGACGGTCAAGTTTGCCAGCACGAAGAATGTGA
TTTGCTCTCTGTGTCAAGGCAAGGGTGGTAAGGAGAGGGCGACGGCCAGG
AAGTGCTCCACTTGCGATGGTGAAGAGGTCTTGGGCATTGACAAGAGTGC
CGGCAAAGATGATATCCGGAAGGCATATCGCAAGTGTCGAAAGCGGACGT
TGACCTCTACGATGTGTTCCCGCTATCGCTTAAAATTTAGATGGAAGGAG
ACAAGATCATCCTCGAGGGCGAGGCCGACCAGGTGCCGGGTCAGGAACCT
GGAGATATCGTTTTCCACATCGTGGAAGAGGAGCACGAGACTTTCCGAAG
GGCTGCTGCCGATCTGACGGCAACAATCGATGTTACGCTGGCCGAGGCTC
TGACGGGCTTCTCCCGGGTGGTAGTCAAGCACCTTGACGGTCGCGGAATC
GAAATTCAGCACCCCAAGACCCCAGGTGAGGTTCTGTATCCGGGCCAGGT
CCTGAAGGTGCCTGGTGAGGGTATGCCCATCAAGCGCAGCGATGCCCGTG
GTGACCTGTACCTGGTCGTCAACATCAAGTTCCCCGACGGGAAATGGAAG
CCCAGCCCTGCTGTTCTGGAGCAACTCAAGGAACTGTTGCCCAAGCCGGA
ACCCCCTATTCAGGCTGACACCGTGGACGAGGTAGAGTTCGACCCCAAGG
GCAATCTGGATGACTTTGGGGCGCATGACCCCGAGGGGGGTTCTGCATGG
GAGGATGATGATGAGGGTGAGACGACTGCGCAGTGTGCGACCCAGTAGGT
TACAAGCAGATTTTGCGCCCGATGGGTCAGTTCCTGTCTCCGGCTATGGT
TCCCTGCCCTACCTGTAACGGAGCGGGTGACTACTTTGTCGACAAGGATA
AGTGCAAGAAGTGCAAGGGCAAGAAGACCACCGAGGCTAAGAAGTTGCTG
GAGATCTACATCCCTCGCGGGGCGAGGCCGCTCTAGCAAATCACCCCGAC
AAAGTCCCCGAAGCCGAAAGACAAGATGCAGAGGTCCGATTCAAGGCCGT
GCAGGAAGCCTACGACATCCTCTACGACGAAGAGAAGCGTGAGATCTACG
ATACCCATGGAATGGGCGCTTTCAACGGCTCCGGTGAACCGGGTATGGGC
GCGGGCCCTGATTTGGATGATATTCTTGCGCAGATGTTCGGTGGTATGGG
AGGTATGGGCGGCATGGGCGGAATGCCCGGTGGTCCGCATGCGCGTAAGC
CGCGCAAGAGCCCGGATGAGGAGCAGAAGTATGAGGTTCGCCTGGAGGAT
CTGTACAAGGGCAAGACGGTCAAGTTTGCCAGCACGAAGAATGTGATTTG
CTCTCTGTGTCAAGGCAAGGGTGGTAAGGAGAGGGCGACGGCCAGGAAGT
GCTCCACTTGCGATGGTGAAGAGGTCTTGGGCATTGACAAGAGTGCCGGC
AAAGATGATATCCGGAAGGCATATCGCAAGTGTCGAAAGCGGACGTTGAC
CTCTACGATGTGTTCCCGCTATCGCTTAAAATTTAGATGGAAGGAGACAA
GATCATCCTCGAGGGCGAGGCCGACCAGGTGCCGGGTCAGGAACCTGGAG
ATATCGTTTTCCACATCGTGGAAGAGGAGCACGAGACTTTCCGAAGGGCT
GCTGCCGATCTGACGGCAACAATCGATGTTACGCTGGCCGAGGCTCTGAC
GGGCTTCTCCCGGGTGGTAGTCAAGCACCTTGACGGTCGCGGAATCGAAA
TTCAGCACCCCAAGACCCCAGGTGAGGTTCTGTATCCGGGCCAGGTCCTG
AAGGTGCCTGGTGAGGGTATGCCCATCAAGCGCAGCGATGCCCGTGGTGA
CCTGTACCTGGTCGTCAACATCAAGTTCCCCGACGGGAAATGGAAGCCCA
GCCCTGCTGTTCTGGAGCAACTCAAGGAACTGTTGCCCAAGCCGGAACCC
CCTATTCAGGCTGACACCGTGGACGAGGTAGAGTTCGACCCCAAGGGCAA
TCTGGATGACTTTGGGGCGCATGACCCCGAGGGGGGTTCTGCATGGGAGG
ATGATGATGAGGGTGAGACGACTGCGCAGTGTGCGACCCAGTAGGTTACA
AGCAGATTTTGCGCCCGATGGGTCAGTTCCTGTCTCCGGCTATGGTTCCC
TGCCCTACCTGTAACGGAGCGGGTGACTACTTTGTCGACAAGGATAAGTG
CAAGAAGTGCAAGGGCAAGAAGACCACCGAGGCTAAGAAGTTGCTGGAGA
TCTACATCCCTCGCGGGGCGAGGCCGCTCTAGCAAATCACCCCGACAAAG
TCCCCGAAGCCGAAAGACAAGATGCAGAGGTCCGATTCAAGGCCGTGCAG
GAAGCCTACGACATCCTCTACGACGAAGAGAAGCGTGAGATCTACGATAC
CCATGGAATGGGCGCTTTCAACGGCTCCGGTGAACCGGGTATGGGCGCGG
GCCCTGATTTGGATGATATTCTTGCGCAGATGTTCGGTGGTATGGGAGGT
ATGGGCGGCATGGGCGGAATGCCCGGTGGTCCGCATGCGCGTAAGCCGCG
CAAGAGCCCGGATGAGGAGCAGAAGTATGAGGTTCGCCTGGAGGATCTGT
ACAAGGGCAAGACGGTCAAGTTTGCCAGCACGAAGAATGTGATTTGCTCT
CTGTGTCAAGGCAAGGGTGGTAAGGAGAGGGCGACGGCCAGGAAGTGCTC
CACTTGCGATGGTGAAGAGGTCTTGGGCATTGACAAGAGTGCCGGCAAAG
ATGATATCCGGAAGGCATATCGCAAGTGTCGAAAGCGGACGTTGACCTCT
ACGATGTGTTCCCGCTATCGCTTAAAATTTAGATGGAAGGAGACAAGATC
ATCCTCGAGGGCGAGGCCGACCAGGTGCCGGGTCAGGAACCTGGAGATAT
CGTTTTCCACATCGTGGAAGAGGAGCACGAGACTTTCCGAAGGGCTGCTG
CCGATCTGACGGCAACAATCGATGTTACGCTGGCCGAGGCTCTGACGGGC
TTCTCCCGGGTGGTAGTCAAGCACCTTGACGGTCGCGGAATCGAAATTCA
GCACCCCAAGACCCCAGGTGAGGTTCTGTATCCGGGCCAGGTCCTGAAGG
TGCCTGGTGAGGGTATGCCCATCAAGCGCAGCGATGCCCGTGGTGACCTG
TACCTGGTCGTCAACATCAAGTTCCCCGACGGGAAATGGAAGCCCAGCCC
TGCTGTTCTGGAGCAACTCAAGGAACTGTTGCCCAAGCCGGAACCCCCTA
TTCAGGCTGACACCGTGGACGAGGTAGAGTTCGACCCCAAGGGCAATCTG
GATGACTTTGGGGCGCATGACCCCGAGGGGGGTTCTGCATGGGAGGATGA
TGATGAGGGTGAGACGACTGCGCAGTGTGCGACCCAGTAGGTTACAAGCA
GATTTTGCGCCCGATGGGTCAGTTCCTGTCTCCGGCTATGGTTCCCTGCC
CTACCTGTAACGGAGCGGGTGACTACTTTGTCGACAAGGATAAGTGCAAG
AAGTGCAAGGGCAAGAAGACCACCGAGGCTAAGAAGTTGCTGGAGATCTA
CATCCCTCGCGGGGCGAGGCCGCTCTAGCAAATCACCCCGACAAAGTCCC
CGAAGCCGAAAGACAAGATGCAGAGGTCCGATTCAAGGCCGTGCAGGAAG
CCTACGACATCCTCTACGACGAAGAGAAGCGTGAGATCTACGATACCCAT
GGAATGGGCGCTTTCAACGGCTCCGGTGAACCGGGTATGGGCGCGGGCCC
TGATTTGGATGATATTCTTGCGCAGATGTTCGGTGGTATGGGAGGTATGG
GCGGCATGGGCGGAATGCCCGGTGGTCCGCATGCGCGTAAGCCGCGCAAG
AGCCCGGATGAGGAGCAGAAGTATGAGGTTCGCCTGGAGGATCTGTACAA
GGGCAAGACGGTCAAGTTTGCCAGCACGAAGAATGTGATTTGCTCTCTGT
GTCAAGGCAAGGGTGGTAAGGAGAGGGCGACGGCCAGGAAGTGCTCCACT
TGCGATGGTGAAGAGGTCTTGGGCATTGACAAGAGTGCCGGCAAAGATGA
TATCCGGAAGGCATATCGCAAGTGTCGAAAGCGGACGTTGACCTCTACGA
TGTGTTCCCGCTATCGCTTAAAATTTAGATGGAAGGAGACAAGATCATCC
TCGAGGGCGAGGCCGACCAGGTGCCGGGTCAGGAACCTGGAGATATCGTT
TTCCACATCGTGGAAGAGGAGCACGAGACTTTCCGAAGGGCTGCTGCCGA
TCTGACGGCAACAATCGATGTTACGCTGGCCGAGGCTCTGACGGGCTTCT
CCCGGGTGGTAGTCAAGCACCTTGACGGTCGCGGAATCGAAATTCAGCAC
CCCAAGACCCCAGGTGAGGTTCTGTATCCGGGCCAGGTCCTGAAGGTGCC
TGGTGAGGGTATGCCCATCAAGCGCAGCGATGCCCGTGGTGACCTGTACC
TGGTCGTCAACATCAAGTTCCCCGACGGGAAATGGAAGCCCAGCCCTGCT
GTTCTGGAGCAACTCAAGGAACTGTTGCCCAAGCCGGAACCCCCTATTCA
GGCTGACACCGTGGACGAGGTAGAGTTCGACCCCAAGGGCAATCTGGATG
ACTTTGGGGCGCATGACCCCGAGGGGGGTTCTGCATGGGAGGATGATGAT
GAGGGTGAGACGACTGCGCAGTGTGCGACCCAGTAGGTTACAAGCAGATT
TTGCGCCCGATGGGTCAGTTCCTGTCTCCGGCTATGGTTCCCTGCCCTAC
CTGTAACGGAGCGGGTGACTACTTTGTCGACAAGGATAAGTGCAAGAAGT
GCAAGGGCAAGAAGACCACCGAGGCTAAGAAGTTGCTGGAGATCTACATC
CCTCGCGGGGCGAGGCCGCTCTAGCAAATCACCCCGACAAAGTCCCCGAA
GCCGAAAGACAAGATGCAGAGGTCCGATTCAAGGCCGTGCAGGAAGCCTA
CGACATCCTCTACGACGAAGAGAAGCGTGAGATCTACGATACCCATGGAA
TGGGCGCTTTCAACGGCTCCGGTGAACCGGGTATGGGCGCGGGCCCTGAT
TTGGATGATATTCTTGCGCAGATGTTCGGTGGTATGGGAGGTATGGGCGG
CATGGGCGGAATGCCCGGTGGTCCGCATGCGCGTAAGCCGCGCAAGAGCC
CGGATGAGGAGCAGAAGTATGAGGTTCGCCTGGAGGATCTGTACAAGGGC
AAGACGGTCAAGTTTGCCAGCACGAAGAATGTGATTTGCTCTCTGTGTCA
AGGCAAGGGTGGTAAGGAGAGGGCGACGGCCAGGAAGTGCTCCACTTGCG
ATGGTGAAGAGGTCTTGGGCATTGACAAGAGTGCCGGCAAAGATGATATC
CGGAAGGCATATCGCAAGTGTCGAAAGCGGACGTTGACCTCTACGATGTG
TTCCCGCTATCGCTTAAAATTTAGAT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006457protein folding
Vocabulary: Molecular Function
TermDefinition
GO:0031072heat shock protein binding
GO:0051082unfolded protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_27630ATCC64974_27630Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_27630-T1ATCC64974_27630-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_27630-T1.cdsATCC64974_27630-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_27630-T1.exon6ATCC64974_27630-T1.exon6Aspergillus niger N402exon
ATCC64974_27630-T1.exon5ATCC64974_27630-T1.exon5Aspergillus niger N402exon
ATCC64974_27630-T1.exon4ATCC64974_27630-T1.exon4Aspergillus niger N402exon
ATCC64974_27630-T1.exon3ATCC64974_27630-T1.exon3Aspergillus niger N402exon
ATCC64974_27630-T1.exon2ATCC64974_27630-T1.exon2Aspergillus niger N402exon
ATCC64974_27630-T1.exon1ATCC64974_27630-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR036410
DBxrefInterPro:IPR008971
DBxrefInterPro:IPR018253
DBxrefInterPro:IPR036869
DBxrefInterPro:IPR002939
DBxrefInterPro:IPR001305
DBxrefInterPro:IPR001623
DBxrefPFAM:PF00684
DBxrefPFAM:PF01556
DBxrefPFAM:PF00226
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000004.1supercontigOGUI01000004.1:331788..333405 -
Powered by Drupal