You are here

Home

ATCC64974_27930-T1, ATCC64974_27930-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_27930-T1
Unique NameATCC64974_27930-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000004.1:438079..439174+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_27930-T1 ID=ATCC64974_27930-T1|Name=ATCC64974_27930-T1|organism=Aspergillus niger N402|type=mRNA|length=1096bp|location=Sequence derived from alignment at OGUI01000004.1:438079..439174+ (Aspergillus niger N402)
ATGGCACCTTCTCTGGAGGAGCCGACCGCTGCCTACCTTGAGGCGCGGTC
GAAGATGGCCCCGAATCTGGTGGCTCCTGAGCCAGGTATGTCCGATATGA
AGCCGGGATATCTGCTTAGGATATGATTAGTGTACTAATCTCTGAGAAGA
ACATTGTCCTGGTCCCGAGTCCGAACAAGCAGGCAAAGGCGATGCCTGTG
CAGGGTGTCCCAATCAATCGATCTGCGCATCTGCCCCCAAAGGTCCTGAC
CCCGATATCCCCATCATCACCGAACGGCTATCGCAAATACGACACAAAAT
CCTTGTACTCTCTGGCAAAGGCGGTGTCGGAAAATCTACTTTCACCTCCC
TTCTCTCCCACGCATTCGCCGCAAATCCTGAATCGACTGTGGGTGTAATG
GATACCGATATCTGCGGGCCGTCGATACCGAAAATGATGGGCGTCGAGGC
GGAGACCATCCACGTGAGCAATGCAGGCTGGAGTCCGGTGTGGGTTACGG
ATAATTTAGCCACGATGAGCGTGCAATTCATGCTGCCCAATCGGGATGAT
GCGGTGATCTGGAGAGGGCCGAAGAAGAACGGACTCATTAAACAATTCTT
GAAGGATGTGGATTGGGGCGAGATGGATTACTTGGTCATTGATACACCCC
CGGGGACATCGGACGAGCATCTGTCCGTCAACTCTCTGCTCAAGGAGTCC
GGTGTGGATGGCGCAGTAGTTGTCACTACCCCACAGGAGGTCTCGTTGCT
CGACGTCAGGAAGGAAATAGACTTTTGCCGCAAGGCAGGCATTCGCATCC
TGGGGCTAGTCGAGAACATGTCTGGCTTCGTGTGCCAATCGTGCAACACT
GAGACCCAGATCTTCCGGGCTACCACCGGGGGCGGAAAGCGACTCGCCAA
GAAGATGGGCATTCCTTTCCTGGGCGCTGTGCCTCTTGACCCGCGGGTAG
GCATGGCATGTGACTATGGTGAGAGCTTCGTGGATCATTATCCCGACAGC
CCAGCATCGATTGCGATCAAGCAAGTTGTCCGCTCGGTTGCTGGGATGAT
TGGAGAGGATCCCAACGACGTGCTGCCGGAGGATGCGGCAGAGTGA
back to top

Coding sequence (CDS) from alignment at OGUI01000004.1:438079..439174+

>ATCC64974_27930-T1 ID=ATCC64974_27930-T1|Name=ATCC64974_27930-T1|organism=Aspergillus niger N402|type=CDS|length=2064bp|location=Sequence derived from alignment at OGUI01000004.1:438079..439174+ (Aspergillus niger N402)
ATGGCACCTTCTCTGGAGGAGCCGACCGCTGCCTACCTTGAGGCGCGGTC
GAAGATGGCCCCGAATCTGGTGGCTCCTGAGCCAGAACATTGTCCTGGTC
CCGAGTCCGAACAAGCAGGCAAAGGCGATGCCTGTGCAGGGTGTCCCAAT
CAATCGATCTGCGCATCTGCCCCCAAAGGTCCTGACCCCGATATCCCCAT
CATCACCGAACGGCTATCGCAAATACGACACAAAATCCTTGTACTCTCTG
GCAAAGGCGGTGTCGGAAAATCTACTTTCACCTCCCTTCTCTCCCACGCA
TTCGCCGCAAATCCTGAATCGACTGTGGGTGTAATGGATACCGATATCTG
CGGGCCGTCGATACCGAAAATGATGGGCGTCGAGGCGGAGACCATCCACG
TGAGCAATGCAGGCTGGAGTCCGGTGTGGGTTACGGATAATTTAGCCACG
ATGAGCGTGCAATTCATGCTGCCCAATCGGGATGATGCGGTGATCTGGAG
AGGGCCGAAGAAGAACGGACTCATTAAACAATTCTTGAAGGATGTGGATT
GGGGCGAGATGGATTACTTGGTCATTGATACACCCCCGGGGACATCGGAC
GAGCATCTGTCCGTCAACTCTCTGCTCAAGGAGTCCGGTGTGGATGGCGC
AGTAGTTGTCACTACCCCACAGGAGGTCTCGTTGCTCGACGTCAGGAAGG
AAATAGACTTTTGCCGCAAGGCAGGCATTCGCATCCTGGGGCTAGTCGAG
AACATGTCTGGCTTCGTGTGCCAATCGTGCAACACTGAGACCCAGATCTT
CCGGGCTACCACCGGGGGCGGAAAGCGACTCGCCAAGAAGATGGGCATTC
CTTTCCTGGGCGCTGTGCCTCTTGACCCGCGGGTAGGCATGGCATGTGAC
TATGGTGAGAGCTTCGTGGATCATTATCCCGACAGCCCAGCATCGATTGC
GATCAAGCAAGTTGTCCGCTCGGTTGCTGGGATGATTGGAGAGGATCCCA
ACGACGTGCTGCCGGAGGATGCGGCAGAGTGAATGGCACCTTCTCTGGAG
GAGCCGACCGCTGCCTACCTTGAGGCGCGGTCGAAGATGGCCCCGAATCT
GGTGGCTCCTGAGCCAGAACATTGTCCTGGTCCCGAGTCCGAACAAGCAG
GCAAAGGCGATGCCTGTGCAGGGTGTCCCAATCAATCGATCTGCGCATCT
GCCCCCAAAGGTCCTGACCCCGATATCCCCATCATCACCGAACGGCTATC
GCAAATACGACACAAAATCCTTGTACTCTCTGGCAAAGGCGGTGTCGGAA
AATCTACTTTCACCTCCCTTCTCTCCCACGCATTCGCCGCAAATCCTGAA
TCGACTGTGGGTGTAATGGATACCGATATCTGCGGGCCGTCGATACCGAA
AATGATGGGCGTCGAGGCGGAGACCATCCACGTGAGCAATGCAGGCTGGA
GTCCGGTGTGGGTTACGGATAATTTAGCCACGATGAGCGTGCAATTCATG
CTGCCCAATCGGGATGATGCGGTGATCTGGAGAGGGCCGAAGAAGAACGG
ACTCATTAAACAATTCTTGAAGGATGTGGATTGGGGCGAGATGGATTACT
TGGTCATTGATACACCCCCGGGGACATCGGACGAGCATCTGTCCGTCAAC
TCTCTGCTCAAGGAGTCCGGTGTGGATGGCGCAGTAGTTGTCACTACCCC
ACAGGAGGTCTCGTTGCTCGACGTCAGGAAGGAAATAGACTTTTGCCGCA
AGGCAGGCATTCGCATCCTGGGGCTAGTCGAGAACATGTCTGGCTTCGTG
TGCCAATCGTGCAACACTGAGACCCAGATCTTCCGGGCTACCACCGGGGG
CGGAAAGCGACTCGCCAAGAAGATGGGCATTCCTTTCCTGGGCGCTGTGC
CTCTTGACCCGCGGGTAGGCATGGCATGTGACTATGGTGAGAGCTTCGTG
GATCATTATCCCGACAGCCCAGCATCGATTGCGATCAAGCAAGTTGTCCG
CTCGGTTGCTGGGATGATTGGAGAGGATCCCAACGACGTGCTGCCGGAGG
ATGCGGCAGAGTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016612molybdenum-iron nitrogenase complex
Vocabulary: Biological Process
TermDefinition
GO:0009399nitrogen fixation
GO:0055114oxidation-reduction process
GO:0016226iron-sulfur cluster assembly
Vocabulary: Molecular Function
TermDefinition
GO:0016163nitrogenase activity
GO:00515394 iron, 4 sulfur cluster binding
GO:0051536iron-sulfur cluster binding
GO:0005524ATP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NBP35ATCC64974_27930Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_27930-T1.exon1ATCC64974_27930-T1.exon1Aspergillus niger N402exon
ATCC64974_27930-T1.exon2ATCC64974_27930-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_27930-T1.cdsATCC64974_27930-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_27930-T1ATCC64974_27930-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR005977
DBxrefInterPro:IPR019591
DBxrefInterPro:IPR028601
DBxrefInterPro:IPR000808
DBxrefInterPro:IPR033756
DBxrefPFAM:PF10609
DBxrefPFAM:PF01656
Productcytosolic Fe-S cluster assembly factor nbp35
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000004.1supercontigOGUI01000004.1:438079..439174 +
Powered by Drupal