You are here

Home

ATCC64974_28090-T1, ATCC64974_28090-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_28090-T1
Unique NameATCC64974_28090-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000004.1:486861..487643+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_28090-T1 ID=ATCC64974_28090-T1|Name=ATCC64974_28090-T1|organism=Aspergillus niger N402|type=mRNA|length=783bp|location=Sequence derived from alignment at OGUI01000004.1:486861..487643+ (Aspergillus niger N402)
ATGCCAAACCCTTCGCAACTCCTGCTTCTTGCCGACCATATCAAGTTATC
GCTACTCGAACGGCAACGGGCCATCTCGCTCGACCTAGAACCCAACAGTC
AAGATGGCGAGATCTCACGCTCCCTCGACTCCTTGAAAGAGGGCATCGAC
GCCGTGGAATCCGACTGCGCACGGCTAGAAGAAGCCAACGATGAAAGCGC
CACCGACATGAGAGACCAACTCGACCACCTATACTCCCAGTATCGAGAAC
TGACATCCCAATTCCGCGGCTCGGATGCTGCTGCAGCGGACGATCCCGTC
GAGTTCACCAACATCAAGAAGTCATCACCGGACCTGAAACAGCCCGTCCC
GCAACATCCTTCCTCCAAATCAGTCCGGTTTATGGATAACGCCGCCGAAG
AGGACGATCTCAATCGCCGGAATCTCTTCCAGCCATACCGCGACTCGCCC
TCCCCACAGGGCGTGGACACATCCGAAATGTCCAACCAGCAGGTCTACGA
TCATCATGAGCAGATCATGCGCGACCAAGACGAGCAGCTAGACCGACTAG
GCGAATCCATCGGACGACAACATCAACTCAGTATCCAGATTGGTGATGAA
CTTGAGGGCCATGTTGCGTTGCTCGATGACATGGATGGCCATGTGGAACG
GCATCAGGGTCGGTTAGACAAGGCCAAACGCCGGCTGGATAAATTTCGGC
GAAGTGCGAGCGAGAATTGGAGCATGATGACAATCATCGGGTTGATCATC
GTCCTCGTCATACTGATCGTCCTTCTCAAGTGA
back to top

Coding sequence (CDS) from alignment at OGUI01000004.1:486861..487643+

>ATCC64974_28090-T1 ID=ATCC64974_28090-T1|Name=ATCC64974_28090-T1|organism=Aspergillus niger N402|type=CDS|length=783bp|location=Sequence derived from alignment at OGUI01000004.1:486861..487643+ (Aspergillus niger N402)
ATGCCAAACCCTTCGCAACTCCTGCTTCTTGCCGACCATATCAAGTTATC
GCTACTCGAACGGCAACGGGCCATCTCGCTCGACCTAGAACCCAACAGTC
AAGATGGCGAGATCTCACGCTCCCTCGACTCCTTGAAAGAGGGCATCGAC
GCCGTGGAATCCGACTGCGCACGGCTAGAAGAAGCCAACGATGAAAGCGC
CACCGACATGAGAGACCAACTCGACCACCTATACTCCCAGTATCGAGAAC
TGACATCCCAATTCCGCGGCTCGGATGCTGCTGCAGCGGACGATCCCGTC
GAGTTCACCAACATCAAGAAGTCATCACCGGACCTGAAACAGCCCGTCCC
GCAACATCCTTCCTCCAAATCAGTCCGGTTTATGGATAACGCCGCCGAAG
AGGACGATCTCAATCGCCGGAATCTCTTCCAGCCATACCGCGACTCGCCC
TCCCCACAGGGCGTGGACACATCCGAAATGTCCAACCAGCAGGTCTACGA
TCATCATGAGCAGATCATGCGCGACCAAGACGAGCAGCTAGACCGACTAG
GCGAATCCATCGGACGACAACATCAACTCAGTATCCAGATTGGTGATGAA
CTTGAGGGCCATGTTGCGTTGCTCGATGACATGGATGGCCATGTGGAACG
GCATCAGGGTCGGTTAGACAAGGCCAAACGCCGGCTGGATAAATTTCGGC
GAAGTGCGAGCGAGAATTGGAGCATGATGACAATCATCGGGTTGATCATC
GTCCTCGTCATACTGATCGTCCTTCTCAAGTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_28090ATCC64974_28090Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_28090-T1.exon1ATCC64974_28090-T1.exon1Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_28090-T1.cdsATCC64974_28090-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_28090-T1ATCC64974_28090-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR000727
DBxrefPFAM:PF05739
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000004.1supercontigOGUI01000004.1:486861..487643 +
Powered by Drupal